RNA–Protein interactions for RNA: ENST00000417612.1

CHL1-AS1-201, CHL1 antisense RNA 1, humanhuman

TSL 1 (best) BASIC

Gene CHL1-AS1, Length 913 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1-AS1-201ENST00000417612 REM2Q8IYK8 340 aaPredicted RBP12.35□□□□□ -0.43
CHL1-AS1-201ENST00000417612 SSUH2Q9Y2M2 353 aa12.32□□□□□ -0.44
CHL1-AS1-201ENST00000417612 CHRDL2Q6WN34 429 aa12.28□□□□□ -0.44
CHL1-AS1-201ENST00000417612 PKD2Q13563 968 aa12.25□□□□□ -0.45
CHL1-AS1-201ENST00000417612 CCDC88BA6NC98 1476 aa12.24□□□□□ -0.45
CHL1-AS1-201ENST00000417612 ERCC6Q03468 1493 aa12.24□□□□□ -0.45
CHL1-AS1-201ENST00000417612 CADPSQ9ULU8 1353 aa12.21□□□□□ -0.45
CHL1-AS1-201ENST00000417612 PITPNM1O00562 1244 aa12.21□□□□□ -0.45
CHL1-AS1-201ENST00000417612 POTEHQ6S545 545 aa12.2□□□□□ -0.46
CHL1-AS1-201ENST00000417612 NESP48681 1621 aa12.19□□□□□ -0.46
CHL1-AS1-201ENST00000417612 PDS5BQ9NTI5 1447 aa12.18□□□□□ -0.46
CHL1-AS1-201ENST00000417612 LAMC3Q9Y6N6 1575 aa12.18□□□□□ -0.46
CHL1-AS1-201ENST00000417612 SPDYE1Q8NFV5 336 aaPredicted RBP12.17□□□□□ -0.46
CHL1-AS1-201ENST00000417612 TRIM41Q8WV44 630 aa12.16□□□□□ -0.46
CHL1-AS1-201ENST00000417612 BCANQ96GW7 911 aa12.16□□□□□ -0.46
CHL1-AS1-201ENST00000417612 KLHL34Q8N239 644 aa12.15□□□□□ -0.46
CHL1-AS1-201ENST00000417612 CLEC11AQ9Y240 323 aa12.12□□□□□ -0.47
CHL1-AS1-201ENST00000417612 CFTRP13569 1480 aa12.11□□□□□ -0.47
CHL1-AS1-201ENST00000417612 VSIG10Q8N0Z9 540 aa12.11□□□□□ -0.47
CHL1-AS1-201ENST00000417612 SPOCK2Q92563 424 aa12.1□□□□□ -0.47
CHL1-AS1-201ENST00000417612 FANCD2Q9BXW9 1451 aa12.08□□□□□ -0.47
CHL1-AS1-201ENST00000417612 ECM2O94769 699 aaPredicted RBP12.08□□□□□ -0.48
CHL1-AS1-201ENST00000417612 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.08□□□□□ -0.48
CHL1-AS1-201ENST00000417612 CEP164Q9UPV0 1460 aa12.08□□□□□ -0.48
CHL1-AS1-201ENST00000417612 PIP4P2Q8N4L2 257 aa12.05□□□□□ -0.48
CHL1-AS1-201ENST00000417612 PRKCSHP14314 528 aaPredicted RBP12.04□□□□□ -0.48
CHL1-AS1-201ENST00000417612 FXR2P51116 673 aaKnown RBP eCLIP12.03□□□□□ -0.48
CHL1-AS1-201ENST00000417612 BBXQ8WY36 941 aaPredicted RBP12.03□□□□□ -0.48
CHL1-AS1-201ENST00000417612 KIF21AQ7Z4S6 1674 aa12.02□□□□□ -0.49
CHL1-AS1-201ENST00000417612 PRDM2Q13029 1718 aa12.01□□□□□ -0.49
CHL1-AS1-201ENST00000417612 PAXIP1Q6ZW49 1069 aaPredicted RBP12.01□□□□□ -0.49
CHL1-AS1-201ENST00000417612 PLCD3Q8N3E9 789 aa12□□□□□ -0.49
CHL1-AS1-201ENST00000417612 CFAP44Q96MT7 982 aa12□□□□□ -0.49
CHL1-AS1-201ENST00000417612 TAOK2Q9UL54 1235 aa12□□□□□ -0.49
CHL1-AS1-201ENST00000417612 MRC2Q9UBG0 1479 aa11.99□□□□□ -0.49
CHL1-AS1-201ENST00000417612 NPM1P06748 294 aaKnown RBP eCLIP11.98□□□□□ -0.49
CHL1-AS1-201ENST00000417612 PRR29P0C7W0 189 aa11.98□□□□□ -0.49
CHL1-AS1-201ENST00000417612 STAG3Q9UJ98 1225 aa11.98□□□□□ -0.49
CHL1-AS1-201ENST00000417612 KDM2AQ9Y2K7 1162 aa11.94□□□□□ -0.5
CHL1-AS1-201ENST00000417612 ABCC8Q09428 1581 aa11.93□□□□□ -0.5
CHL1-AS1-201ENST00000417612 RGL2O15211 777 aa11.93□□□□□ -0.5
CHL1-AS1-201ENST00000417612 PRKAR2AP13861 404 aaKnown RBP11.91□□□□□ -0.5
CHL1-AS1-201ENST00000417612 CUX2O14529 1486 aa11.9□□□□□ -0.5
CHL1-AS1-201ENST00000417612 THOC2Q8NI27 1593 aaKnown RBP11.89□□□□□ -0.51
CHL1-AS1-201ENST00000417612 WRNQ14191 1432 aaPredicted RBP eCLIP11.89□□□□□ -0.51
CHL1-AS1-201ENST00000417612 MIER1Q8N108 512 aa11.89□□□□□ -0.51
CHL1-AS1-201ENST00000417612 URB2Q14146 1524 aaKnown RBP11.88□□□□□ -0.51
CHL1-AS1-201ENST00000417612 DNMBPQ6XZF7 1577 aa11.88□□□□□ -0.51
CHL1-AS1-201ENST00000417612 WDR62O43379 1518 aa11.87□□□□□ -0.51
CHL1-AS1-201ENST00000417612 TOPBP1Q92547 1522 aa11.87□□□□□ -0.51
CHL1-AS1-201ENST00000417612 TPRNQ4KMQ1 711 aa11.86□□□□□ -0.51
CHL1-AS1-201ENST00000417612 SPRYD3Q8NCJ5 442 aa11.85□□□□□ -0.51
CHL1-AS1-201ENST00000417612 CIZ1Q9ULV3 898 aaPredicted RBP11.84□□□□□ -0.51
CHL1-AS1-201ENST00000417612 CHADLQ6NUI6 762 aa11.83□□□□□ -0.52
CHL1-AS1-201ENST00000417612 CUX1P39880 1505 aa11.81□□□□□ -0.52
CHL1-AS1-201ENST00000417612 SOGA1O94964 1423 aa11.81□□□□□ -0.52
CHL1-AS1-201ENST00000417612 TSHZ2Q9NRE2 1034 aa11.81□□□□□ -0.52
CHL1-AS1-201ENST00000417612 FGD5Q6ZNL6 1462 aa11.81□□□□□ -0.52
CHL1-AS1-201ENST00000417612 CHGAP10645 457 aaKnown RBP11.8□□□□□ -0.52
CHL1-AS1-201ENST00000417612 IFT140Q96RY7 1462 aa11.8□□□□□ -0.52
CHL1-AS1-201ENST00000417612 PLEKHG5O94827 1062 aa11.78□□□□□ -0.52
CHL1-AS1-201ENST00000417612 POLA1P09884 1462 aaPredicted RBP11.77□□□□□ -0.52
CHL1-AS1-201ENST00000417612 SYNJ1O43426 1573 aa11.76□□□□□ -0.53
CHL1-AS1-201ENST00000417612 TOP2BQ02880 1626 aa11.76□□□□□ -0.53
CHL1-AS1-201ENST00000417612 HAX1O00165 279 aa11.76□□□□□ -0.53
CHL1-AS1-201ENST00000417612 RAD54L2Q9Y4B4 1467 aa11.76□□□□□ -0.53
CHL1-AS1-201ENST00000417612 ZBTB47Q9UFB7 747 aaPredicted RBP11.75□□□□□ -0.53
CHL1-AS1-201ENST00000417612 CREBZFQ9NS37 354 aa11.74□□□□□ -0.53
CHL1-AS1-201ENST00000417612 BIVM-ERCC5R4GMW8 1640 aa11.74□□□□□ -0.53
CHL1-AS1-201ENST00000417612 TDRD9Q8NDG6 1382 aaKnown RBP11.73□□□□□ -0.53
CHL1-AS1-201ENST00000417612 FARP1Q9Y4F1 1045 aaPredicted RBP11.71□□□□□ -0.53
CHL1-AS1-201ENST00000417612 AQRO60306 1485 aaKnown RBP eCLIP11.69□□□□□ -0.54
CHL1-AS1-201ENST00000417612 ZNF608Q9ULD9 1512 aaPredicted RBP11.68□□□□□ -0.54
CHL1-AS1-201ENST00000417612 FAM9AQ8IZU1 332 aaPredicted RBP11.67□□□□□ -0.54
CHL1-AS1-201ENST00000417612 KIF27Q86VH2 1401 aa11.67□□□□□ -0.54
CHL1-AS1-201ENST00000417612 GAPVD1Q14C86 1478 aa11.66□□□□□ -0.54
CHL1-AS1-201ENST00000417612 ABCA10Q8WWZ4 1543 aa11.65□□□□□ -0.54
CHL1-AS1-201ENST00000417612 TARBP1Q13395 1621 aaKnown RBP11.65□□□□□ -0.54
CHL1-AS1-201ENST00000417612 CHMP7Q8WUX9 453 aaPredicted RBP11.65□□□□□ -0.54
CHL1-AS1-201ENST00000417612 EIF4G3O43432 1585 aaKnown RBP11.64□□□□□ -0.55
CHL1-AS1-201ENST00000417612 NBR1Q14596 966 aa11.64□□□□□ -0.55
CHL1-AS1-201ENST00000417612 GRIN2BQ13224 1484 aa11.63□□□□□ -0.55
CHL1-AS1-201ENST00000417612 C19orf67A6NJJ6 358 aa11.63□□□□□ -0.55
CHL1-AS1-201ENST00000417612 HS6ST3Q8IZP7 471 aa11.63□□□□□ -0.55
CHL1-AS1-201ENST00000417612 WDR97A6NE52 1622 aa11.61□□□□□ -0.55
CHL1-AS1-201ENST00000417612 SP7Q8TDD2 431 aaPredicted RBP11.6□□□□□ -0.55
CHL1-AS1-201ENST00000417612 SNAPC4Q5SXM2 1469 aa11.59□□□□□ -0.55
CHL1-AS1-201ENST00000417612 EVX2Q03828 476 aa11.59□□□□□ -0.55
CHL1-AS1-201ENST00000417612 PBRM1Q86U86 1689 aa11.57□□□□□ -0.56
CHL1-AS1-201ENST00000417612 MNX1P50219 401 aaPredicted RBP11.57□□□□□ -0.56
CHL1-AS1-201ENST00000417612 GSE1Q14687 1217 aa11.56□□□□□ -0.56
CHL1-AS1-201ENST00000417612 RNF25Q96BH1 459 aaPredicted RBP11.56□□□□□ -0.56
CHL1-AS1-201ENST00000417612 ABCA5Q8WWZ7 1642 aa11.56□□□□□ -0.56
CHL1-AS1-201ENST00000417612 MAGI1Q96QZ7 1491 aaPredicted RBP11.56□□□□□ -0.56
CHL1-AS1-201ENST00000417612 CD44P16070 742 aaKnown RBP11.55□□□□□ -0.56
CHL1-AS1-201ENST00000417612 EEA1Q15075 1411 aa11.54□□□□□ -0.56
CHL1-AS1-201ENST00000417612 ERICH3Q5RHP9 1530 aa11.54□□□□□ -0.56
CHL1-AS1-201ENST00000417612 CARMIL1Q5VZK9 1371 aa11.53□□□□□ -0.56
CHL1-AS1-201ENST00000417612 FHAD1B1AJZ9 1412 aa11.52□□□□□ -0.56
CHL1-AS1-201ENST00000417612 SYNJ2O15056 1496 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms