RNA–Protein interactions for RNA: ENST00000416591.5

CAPN10-209, Transcript of calpain 10, humanhuman

TSL 1 (best)

Gene CAPN10, Length 2,514 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN10-209ENST00000416591 ABCA10Q8WWZ4 1543 aa29.52■■■□□ 2.32
CAPN10-209ENST00000416591 TOPBP1Q92547 1522 aa29.52■■■□□ 2.32
CAPN10-209ENST00000416591 POLA1P09884 1462 aaPredicted RBP29.51■■■□□ 2.31
CAPN10-209ENST00000416591 ITGAEP38570 1179 aa29.49■■■□□ 2.31
CAPN10-209ENST00000416591 NESP48681 1621 aa29.49■■■□□ 2.31
CAPN10-209ENST00000416591 FHAD1B1AJZ9 1412 aa29.49■■■□□ 2.31
CAPN10-209ENST00000416591 LRRC9Q6ZRR7 1453 aa29.49■■■□□ 2.31
CAPN10-209ENST00000416591 RAB3GAP2Q9H2M9 1393 aa29.46■■■□□ 2.31
CAPN10-209ENST00000416591 MAPKBP1O60336 1514 aa29.43■■■□□ 2.3
CAPN10-209ENST00000416591 PCF11O94913 1555 aaKnown RBP29.43■■■□□ 2.3
CAPN10-209ENST00000416591 P3H3Q8IVL6 736 aa29.41■■■□□ 2.3
CAPN10-209ENST00000416591 CFAP43Q8NDM7 1665 aa29.41■■■□□ 2.3
CAPN10-209ENST00000416591 CUL7Q14999 1698 aa29.38■■■□□ 2.29
CAPN10-209ENST00000416591 PHLDB1Q86UU1 1377 aa29.38■■■□□ 2.29
CAPN10-209ENST00000416591 FHOD3Q2V2M9 1422 aa29.35■■■□□ 2.29
CAPN10-209ENST00000416591 SETD5Q9C0A6 1442 aa29.34■■■□□ 2.29
CAPN10-209ENST00000416591 EFCAB5A4FU69 1503 aa29.34■■■□□ 2.29
CAPN10-209ENST00000416591 LAMC3Q9Y6N6 1575 aa29.32■■■□□ 2.28
CAPN10-209ENST00000416591 CTTNBP2Q8WZ74 1663 aa29.3■■■□□ 2.28
CAPN10-209ENST00000416591 ATP1B4Q9UN42 357 aaPredicted RBP29.3■■■□□ 2.28
CAPN10-209ENST00000416591 FYCO1Q9BQS8 1478 aa29.29■■■□□ 2.28
CAPN10-209ENST00000416591 URB2Q14146 1524 aaKnown RBP29.29■■■□□ 2.28
CAPN10-209ENST00000416591 WDR97A6NE52 1622 aa29.27■■■□□ 2.28
CAPN10-209ENST00000416591 CASKIN1Q8WXD9 1431 aa29.25■■■□□ 2.27
CAPN10-209ENST00000416591 FAM50AQ14320 339 aaKnown RBP29.25■■■□□ 2.27
CAPN10-209ENST00000416591 AQRO60306 1485 aaKnown RBP eCLIP29.24■■■□□ 2.275e-8■■■■■ 30.3
CAPN10-209ENST00000416591 KCNH8Q96L42 1107 aa29.2■■■□□ 2.26
CAPN10-209ENST00000416591 ABCA5Q8WWZ7 1642 aa29.17■■■□□ 2.26
CAPN10-209ENST00000416591 TSHZ2Q9NRE2 1034 aa29.17■■■□□ 2.26
CAPN10-209ENST00000416591 FMN1Q68DA7 1419 aa29.15■■■□□ 2.26
CAPN10-209ENST00000416591 TDRD9Q8NDG6 1382 aaKnown RBP29.15■■■□□ 2.26
CAPN10-209ENST00000416591 TIMELESSQ9UNS1 1208 aa29.14■■■□□ 2.25
CAPN10-209ENST00000416591 SIN3AQ96ST3 1273 aa29.12■■■□□ 2.25
CAPN10-209ENST00000416591 PDS5BQ9NTI5 1447 aa29.11■■■□□ 2.25
CAPN10-209ENST00000416591 GAPVD1Q14C86 1478 aa29.11■■■□□ 2.25
CAPN10-209ENST00000416591 DDX10Q13206 875 aaKnown RBP29.1■■■□□ 2.25
CAPN10-209ENST00000416591 SNAPC4Q5SXM2 1469 aa29.1■■■□□ 2.25
CAPN10-209ENST00000416591 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.09■■■□□ 2.25
CAPN10-209ENST00000416591 SAMD9Q5K651 1589 aa29.06■■■□□ 2.24
CAPN10-209ENST00000416591 PPP1R15AO75807 674 aaPredicted RBP29.03■■■□□ 2.24
CAPN10-209ENST00000416591 KIF21AQ7Z4S6 1674 aa29.02■■■□□ 2.24
CAPN10-209ENST00000416591 DNAJC5BQ9UF47 199 aa29.01■■■□□ 2.24
CAPN10-209ENST00000416591 FGD6Q6ZV73 1430 aa29.01■■■□□ 2.23
CAPN10-209ENST00000416591 MTUS2Q5JR59 1369 aa28.99■■■□□ 2.23
CAPN10-209ENST00000416591 LRRIQ1Q96JM4 1722 aa28.96■■■□□ 2.23
CAPN10-209ENST00000416591 GRIN2BQ13224 1484 aa28.94■■■□□ 2.22
CAPN10-209ENST00000416591 CCER2I3L3R5 266 aa28.94■■■□□ 2.22
CAPN10-209ENST00000416591 TARBP1Q13395 1621 aaKnown RBP28.93■■■□□ 2.22
CAPN10-209ENST00000416591 FKBP8Q14318 412 aa28.93■■■□□ 2.22
CAPN10-209ENST00000416591 BCANQ96GW7 911 aa28.9■■■□□ 2.22
CAPN10-209ENST00000416591 THOC2Q8NI27 1593 aaKnown RBP28.9■■■□□ 2.22
CAPN10-209ENST00000416591 ANP32CO43423 234 aa28.89■■■□□ 2.22
CAPN10-209ENST00000416591 NCOA2Q15596 1464 aa28.86■■■□□ 2.21
CAPN10-209ENST00000416591 ANP32EQ9BTT0 268 aa28.85■■■□□ 2.21
CAPN10-209ENST00000416591 NEFLP07196 543 aa28.84■■■□□ 2.21
CAPN10-209ENST00000416591 HIRIP3Q9BW71 556 aaPredicted RBP28.84■■■□□ 2.21
CAPN10-209ENST00000416591 PTPRKQ15262 1439 aa28.83■■■□□ 2.21
CAPN10-209ENST00000416591 MYOM3Q5VTT5 1437 aa28.83■■■□□ 2.21
CAPN10-209ENST00000416591 SUPT6HQ7KZ85 1726 aaKnown RBP28.83■■■□□ 2.21
CAPN10-209ENST00000416591 EHBP1L1Q8N3D4 1523 aa28.82■■■□□ 2.2
CAPN10-209ENST00000416591 CCDC18Q5T9S5 1454 aa28.82■■■□□ 2.2
CAPN10-209ENST00000416591 TONSLQ96HA7 1378 aa28.81■■■□□ 2.2
CAPN10-209ENST00000416591 HFM1A2PYH4 1435 aa28.81■■■□□ 2.2
CAPN10-209ENST00000416591 PBRM1Q86U86 1689 aa28.8■■■□□ 2.2
CAPN10-209ENST00000416591 PTPN23Q9H3S7 1636 aa28.78■■■□□ 2.2
CAPN10-209ENST00000416591 UACAQ9BZF9 1416 aa28.75■■■□□ 2.19
CAPN10-209ENST00000416591 TRIM52Q96A61 297 aa28.74■■■□□ 2.19
CAPN10-209ENST00000416591 UGGT2Q9NYU1 1516 aa28.74■■■□□ 2.19
CAPN10-209ENST00000416591 MAGI3Q5TCQ9 1506 aa28.73■■■□□ 2.19
CAPN10-209ENST00000416591 ARHGEF11O15085 1522 aa28.72■■■□□ 2.19
CAPN10-209ENST00000416591 NAIPQ13075 1403 aa28.72■■■□□ 2.19
CAPN10-209ENST00000416591 IQGAP2Q13576 1575 aa28.71■■■□□ 2.19
CAPN10-209ENST00000416591 ADAMTS12P58397 1594 aa28.71■■■□□ 2.19
CAPN10-209ENST00000416591 HECW1Q76N89 1606 aa28.69■■■□□ 2.18
CAPN10-209ENST00000416591 MRC2Q9UBG0 1479 aa28.68■■■□□ 2.18
CAPN10-209ENST00000416591 EPRSP07814 1512 aaKnown RBP28.61■■■□□ 2.17
CAPN10-209ENST00000416591 TCOF1Q13428 1488 aaKnown RBP28.6■■■□□ 2.17
CAPN10-209ENST00000416591 RBM19Q9Y4C8 960 aaKnown RBP28.58■■■□□ 2.16
CAPN10-209ENST00000416591 WDR62O43379 1518 aa28.56■■■□□ 2.16
CAPN10-209ENST00000416591 CDK13Q14004 1512 aaKnown RBP28.56■■■□□ 2.16
CAPN10-209ENST00000416591 KDM5BQ9UGL1 1544 aa28.55■■■□□ 2.16
CAPN10-209ENST00000416591 RRP7BPQ9NSQ0 103 aa28.53■■■□□ 2.16
CAPN10-209ENST00000416591 GCC2Q8IWJ2 1684 aa28.52■■■□□ 2.16
CAPN10-209ENST00000416591 CHIC2Q9UKJ5 165 aa28.51■■■□□ 2.15
CAPN10-209ENST00000416591 ZNF608Q9ULD9 1512 aaPredicted RBP28.51■■■□□ 2.15
CAPN10-209ENST00000416591 IFT140Q96RY7 1462 aa28.51■■■□□ 2.15
CAPN10-209ENST00000416591 MIA2Q96PC5 1412 aa28.49■■■□□ 2.15
CAPN10-209ENST00000416591 AKNAQ7Z591 1439 aa28.47■■■□□ 2.15
CAPN10-209ENST00000416591 ARID3CA6NKF2 412 aa28.47■■■□□ 2.15
CAPN10-209ENST00000416591 HNRNPUQ00839 825 aaKnown RBP eCLIP28.43■■■□□ 2.14
CAPN10-209ENST00000416591 KIAA0586Q9BVV6 1533 aa28.42■■■□□ 2.14
CAPN10-209ENST00000416591 KDM6BO15054 1643 aa28.41■■■□□ 2.14
CAPN10-209ENST00000416591 KIAA0556O60303 1618 aa28.41■■■□□ 2.14
CAPN10-209ENST00000416591 DENND4BO75064 1496 aaPredicted RBP28.4■■■□□ 2.14
CAPN10-209ENST00000416591 DISP1Q96F81 1524 aa28.4■■■□□ 2.14
CAPN10-209ENST00000416591 HSPA5P11021 654 aaKnown RBP28.38■■■□□ 2.13
CAPN10-209ENST00000416591 WASHC2AQ641Q2 1341 aa28.38■■■□□ 2.13
CAPN10-209ENST00000416591 GRIN2AQ12879 1464 aa28.33■■■□□ 2.13
CAPN10-209ENST00000416591 EIF4G3O43432 1585 aaKnown RBP28.32■■■□□ 2.12
CAPN10-209ENST00000416591 NUP153P49790 1475 aaKnown RBP28.32■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms