RNA–Protein interactions for RNA: ENST00000416457.5

CNOT10-203, Transcript of CCR4-NOT transcription complex subunit 10, humanhuman

TSL 2

Gene CNOT10, Length 2,096 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT10-203ENST00000416457 CUX2O14529 1486 aa11.2□□□□□ -0.62
CNOT10-203ENST00000416457 ZNF219Q9P2Y4 722 aaPredicted RBP11.19□□□□□ -0.62
CNOT10-203ENST00000416457 ABCB7O75027 752 aa11.18□□□□□ -0.62
CNOT10-203ENST00000416457 ARXQ96QS3 562 aa11.18□□□□□ -0.62
CNOT10-203ENST00000416457 SOGA1O94964 1423 aa11.17□□□□□ -0.62
CNOT10-203ENST00000416457 RUSC2Q8N2Y8 1516 aa11.16□□□□□ -0.62
CNOT10-203ENST00000416457 TIMELESSQ9UNS1 1208 aa11.16□□□□□ -0.62
CNOT10-203ENST00000416457 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.15□□□□□ -0.62
CNOT10-203ENST00000416457 HNRNPUL2Q1KMD3 747 aaKnown RBP11.15□□□□□ -0.62
CNOT10-203ENST00000416457 FAM9AQ8IZU1 332 aaPredicted RBP11.14□□□□□ -0.63
CNOT10-203ENST00000416457 TARBP1Q13395 1621 aaKnown RBP11.14□□□□□ -0.63
CNOT10-203ENST00000416457 TDRD9Q8NDG6 1382 aaKnown RBP11.12□□□□□ -0.63
CNOT10-203ENST00000416457 ZNF608Q9ULD9 1512 aaPredicted RBP11.12□□□□□ -0.63
CNOT10-203ENST00000416457 ABCA10Q8WWZ4 1543 aa11.11□□□□□ -0.63
CNOT10-203ENST00000416457 IFT140Q96RY7 1462 aa11.1□□□□□ -0.63
CNOT10-203ENST00000416457 TAOK2Q9UL54 1235 aa11.09□□□□□ -0.63
CNOT10-203ENST00000416457 AQRO60306 1485 aaKnown RBP eCLIP11.09□□□□□ -0.635e-7■■■□□ 17.2
CNOT10-203ENST00000416457 WDR97A6NE52 1622 aa11.08□□□□□ -0.64
CNOT10-203ENST00000416457 SAMD1Q6SPF0 538 aaPredicted RBP11.08□□□□□ -0.64
CNOT10-203ENST00000416457 KIF27Q86VH2 1401 aa11.06□□□□□ -0.64
CNOT10-203ENST00000416457 GAPVD1Q14C86 1478 aa11.04□□□□□ -0.64
CNOT10-203ENST00000416457 IGF1RP08069 1367 aa11.04□□□□□ -0.64
CNOT10-203ENST00000416457 ABCA5Q8WWZ7 1642 aa11.04□□□□□ -0.64
CNOT10-203ENST00000416457 EIF4G3O43432 1585 aaKnown RBP11.02□□□□□ -0.64
CNOT10-203ENST00000416457 LOC105371045A0A1W2PR82 267 aa11□□□□□ -0.65
CNOT10-203ENST00000416457 EEA1Q15075 1411 aa10.99□□□□□ -0.65
CNOT10-203ENST00000416457 TULP1O00294 542 aaPredicted RBP10.98□□□□□ -0.65
CNOT10-203ENST00000416457 GRIN2BQ13224 1484 aa10.97□□□□□ -0.65
CNOT10-203ENST00000416457 PBRM1Q86U86 1689 aa10.96□□□□□ -0.65
CNOT10-203ENST00000416457 ERICH3Q5RHP9 1530 aa10.96□□□□□ -0.65
CNOT10-203ENST00000416457 BCANQ96GW7 911 aa10.96□□□□□ -0.65
CNOT10-203ENST00000416457 PRXQ9BXM0 1461 aa10.95□□□□□ -0.66
CNOT10-203ENST00000416457 CARMIL1Q5VZK9 1371 aa10.95□□□□□ -0.66
CNOT10-203ENST00000416457 SNAPC4Q5SXM2 1469 aa10.95□□□□□ -0.66
CNOT10-203ENST00000416457 RAPGEF2Q9Y4G8 1499 aa10.94□□□□□ -0.66
CNOT10-203ENST00000416457 RBM42Q9BTD8 480 aaKnown RBP10.93□□□□□ -0.66
CNOT10-203ENST00000416457 FBLN2P98095 1184 aa10.91□□□□□ -0.66
CNOT10-203ENST00000416457 MYCNP04198 464 aaPredicted RBP10.9□□□□□ -0.66
CNOT10-203ENST00000416457 TPRNQ4KMQ1 711 aa10.9□□□□□ -0.66
CNOT10-203ENST00000416457 ADAMTS12P58397 1594 aa10.9□□□□□ -0.66
CNOT10-203ENST00000416457 FHAD1B1AJZ9 1412 aa10.9□□□□□ -0.67
CNOT10-203ENST00000416457 MAGI1Q96QZ7 1491 aaPredicted RBP10.89□□□□□ -0.67
CNOT10-203ENST00000416457 CUL7Q14999 1698 aa10.89□□□□□ -0.67
CNOT10-203ENST00000416457 KIF21BO75037 1637 aa10.89□□□□□ -0.67
CNOT10-203ENST00000416457 CHMP7Q8WUX9 453 aaPredicted RBP10.88□□□□□ -0.67
CNOT10-203ENST00000416457 SYNJ2O15056 1496 aa10.87□□□□□ -0.67
CNOT10-203ENST00000416457 UBTFP17480 764 aaKnown RBP10.86□□□□□ -0.67
CNOT10-203ENST00000416457 GOLGA3Q08378 1498 aa10.86□□□□□ -0.67
CNOT10-203ENST00000416457 PLCB2Q00722 1185 aa10.86□□□□□ -0.67
CNOT10-203ENST00000416457 POLA2Q14181 598 aa10.86□□□□□ -0.67
CNOT10-203ENST00000416457 GRIN2AQ12879 1464 aa10.85□□□□□ -0.67
CNOT10-203ENST00000416457 ZBTB22O15209 634 aa10.84□□□□□ -0.67
CNOT10-203ENST00000416457 HOMEZQ8IX15 550 aa10.83□□□□□ -0.68
CNOT10-203ENST00000416457 CHD1O14646 1710 aa10.82□□□□□ -0.68
CNOT10-203ENST00000416457 RANGAP1P46060 587 aaPredicted RBP10.81□□□□□ -0.68
CNOT10-203ENST00000416457 CEP170Q5SW79 1584 aa10.8□□□□□ -0.68
CNOT10-203ENST00000416457 TNIKQ9UKE5 1360 aa10.8□□□□□ -0.68
CNOT10-203ENST00000416457 NUP160Q12769 1436 aa10.79□□□□□ -0.68
CNOT10-203ENST00000416457 CHRDL2Q6WN34 429 aa10.78□□□□□ -0.68
CNOT10-203ENST00000416457 TTBK1Q5TCY1 1321 aaPredicted RBP10.76□□□□□ -0.69
CNOT10-203ENST00000416457 KIAA0586Q9BVV6 1533 aa10.75□□□□□ -0.69
CNOT10-203ENST00000416457 CTTNBP2Q8WZ74 1663 aa10.74□□□□□ -0.69
CNOT10-203ENST00000416457 OSCARQ8IYS5 282 aa10.74□□□□□ -0.69
CNOT10-203ENST00000416457 CEP162Q5TB80 1403 aa10.74□□□□□ -0.69
CNOT10-203ENST00000416457 PELP1Q8IZL8 1130 aaKnown RBP10.73□□□□□ -0.69
CNOT10-203ENST00000416457 JPH4Q96JJ6 628 aa10.73□□□□□ -0.69
CNOT10-203ENST00000416457 IQGAP2Q13576 1575 aa10.72□□□□□ -0.69
CNOT10-203ENST00000416457 HAP1P54257 671 aaPredicted RBP10.72□□□□□ -0.69
CNOT10-203ENST00000416457 P3H3Q8IVL6 736 aa10.72□□□□□ -0.69
CNOT10-203ENST00000416457 CLASP1Q7Z460 1538 aa10.71□□□□□ -0.7
CNOT10-203ENST00000416457 CLIP1P30622 1438 aa10.7□□□□□ -0.7
CNOT10-203ENST00000416457 ARHGAP35Q9NRY4 1499 aa10.69□□□□□ -0.7
CNOT10-203ENST00000416457 DISP1Q96F81 1524 aa10.67□□□□□ -0.7
CNOT10-203ENST00000416457 UGGT2Q9NYU1 1516 aa10.67□□□□□ -0.7
CNOT10-203ENST00000416457 GTF3C3Q9Y5Q9 886 aa10.67□□□□□ -0.7
CNOT10-203ENST00000416457 ARAP1Q96P48 1450 aa10.67□□□□□ -0.7
CNOT10-203ENST00000416457 ERCC6L2Q5T890 1561 aa10.66□□□□□ -0.7
CNOT10-203ENST00000416457 FOXD4L1Q9NU39 408 aa10.66□□□□□ -0.7
CNOT10-203ENST00000416457 ERICH6Q7L0X2 663 aa10.65□□□□□ -0.7
CNOT10-203ENST00000416457 PRG4Q92954 1404 aaPredicted RBP10.65□□□□□ -0.7
CNOT10-203ENST00000416457 ATF5Q9Y2D1 282 aaPredicted RBP10.65□□□□□ -0.7
CNOT10-203ENST00000416457 SHROOM2Q13796 1616 aa10.65□□□□□ -0.7
CNOT10-203ENST00000416457 SAMD9Q5K651 1589 aa10.65□□□□□ -0.7
CNOT10-203ENST00000416457 FHOD3Q2V2M9 1422 aa10.65□□□□□ -0.7
CNOT10-203ENST00000416457 ZBTB12Q9Y330 459 aaPredicted RBP10.63□□□□□ -0.71
CNOT10-203ENST00000416457 AKT1S1Q96B36 256 aa10.62□□□□□ -0.71
CNOT10-203ENST00000416457 KIAA0556O60303 1618 aa10.62□□□□□ -0.71
CNOT10-203ENST00000416457 EFCAB5A4FU69 1503 aa10.61□□□□□ -0.71
CNOT10-203ENST00000416457 PODXL2Q9NZ53 605 aa10.6□□□□□ -0.71
CNOT10-203ENST00000416457 CARMIL2Q6F5E8 1435 aa10.59□□□□□ -0.71
CNOT10-203ENST00000416457 KLHL34Q8N239 644 aa10.58□□□□□ -0.72
CNOT10-203ENST00000416457 ARHGEF11O15085 1522 aa10.56□□□□□ -0.72
CNOT10-203ENST00000416457 VPS8Q8N3P4 1428 aa10.56□□□□□ -0.72
CNOT10-203ENST00000416457 PTPRGP23470 1445 aa10.56□□□□□ -0.72
CNOT10-203ENST00000416457 PLB1Q6P1J6 1458 aa10.55□□□□□ -0.72
CNOT10-203ENST00000416457 MYT1Q01538 1121 aa10.55□□□□□ -0.72
CNOT10-203ENST00000416457 ATP1B4Q9UN42 357 aaPredicted RBP10.54□□□□□ -0.72
CNOT10-203ENST00000416457 FMN1Q68DA7 1419 aa10.53□□□□□ -0.72
CNOT10-203ENST00000416457 ARID3CA6NKF2 412 aa10.53□□□□□ -0.72
CNOT10-203ENST00000416457 PCF11O94913 1555 aaKnown RBP10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms