RNA–Protein interactions for RNA: ENST00000416438.6

LINC00475-202, long intergenic non-protein coding RNA 475, humanhuman

TSL 2 BASIC

Gene LINC00475, Length 2,506 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00475-202ENST00000416438 DNMBPQ6XZF7 1577 aa21.4■■□□□ 1.02
LINC00475-202ENST00000416438 TIAM1Q13009 1591 aa21.39■■□□□ 1.01
LINC00475-202ENST00000416438 TOPBP1Q92547 1522 aa21.39■■□□□ 1.01
LINC00475-202ENST00000416438 FAM50AQ14320 339 aaKnown RBP21.38■■□□□ 1.01
LINC00475-202ENST00000416438 PHLDB1Q86UU1 1377 aa21.38■■□□□ 1.01
LINC00475-202ENST00000416438 POLA1P09884 1462 aaPredicted RBP21.37■■□□□ 1.01
LINC00475-202ENST00000416438 LRRC9Q6ZRR7 1453 aa21.36■■□□□ 1.01
LINC00475-202ENST00000416438 ABCA10Q8WWZ4 1543 aa21.33■■□□□ 1
LINC00475-202ENST00000416438 MAP3K1Q13233 1512 aa21.31■■□□□ 1
LINC00475-202ENST00000416438 SIN3AQ96ST3 1273 aa21.3■■□□□ 1
LINC00475-202ENST00000416438 MAPKBP1O60336 1514 aa21.3■■□□□ 1
LINC00475-202ENST00000416438 SETD5Q9C0A6 1442 aa21.3■■□□□ 1
LINC00475-202ENST00000416438 FHOD3Q2V2M9 1422 aa21.29■■□□□ 1
LINC00475-202ENST00000416438 DNAJC5BQ9UF47 199 aa21.28■■□□□ 1
LINC00475-202ENST00000416438 FHAD1B1AJZ9 1412 aa21.28■■□□□ 1
LINC00475-202ENST00000416438 URB2Q14146 1524 aaKnown RBP21.25■□□□□ 0.99
LINC00475-202ENST00000416438 PCF11O94913 1555 aaKnown RBP21.25■□□□□ 0.99
LINC00475-202ENST00000416438 LAMC3Q9Y6N6 1575 aa21.23■□□□□ 0.99
LINC00475-202ENST00000416438 KCNH8Q96L42 1107 aa21.22■□□□□ 0.99
LINC00475-202ENST00000416438 TDRD9Q8NDG6 1382 aaKnown RBP21.19■□□□□ 0.98
LINC00475-202ENST00000416438 CUL7Q14999 1698 aa21.18■□□□□ 0.98
LINC00475-202ENST00000416438 WDR97A6NE52 1622 aa21.14■□□□□ 0.97
LINC00475-202ENST00000416438 CFAP43Q8NDM7 1665 aa21.14■□□□□ 0.97
LINC00475-202ENST00000416438 DDX10Q13206 875 aaKnown RBP21.14■□□□□ 0.97
LINC00475-202ENST00000416438 HIRIP3Q9BW71 556 aaPredicted RBP21.14■□□□□ 0.97
LINC00475-202ENST00000416438 CTTNBP2Q8WZ74 1663 aa21.12■□□□□ 0.97
LINC00475-202ENST00000416438 SUPT16HQ9Y5B9 1047 aaKnown RBP21.12■□□□□ 0.97
LINC00475-202ENST00000416438 CASKIN1Q8WXD9 1431 aa21.12■□□□□ 0.97
LINC00475-202ENST00000416438 EFCAB5A4FU69 1503 aa21.11■□□□□ 0.97
LINC00475-202ENST00000416438 PDS5BQ9NTI5 1447 aa21.11■□□□□ 0.97
LINC00475-202ENST00000416438 FYCO1Q9BQS8 1478 aa21.1■□□□□ 0.97
LINC00475-202ENST00000416438 GAPVD1Q14C86 1478 aa21.08■□□□□ 0.97
LINC00475-202ENST00000416438 ABCA5Q8WWZ7 1642 aa21.08■□□□□ 0.96
LINC00475-202ENST00000416438 KIF21AQ7Z4S6 1674 aa21.07■□□□□ 0.96
LINC00475-202ENST00000416438 PPP1R15AO75807 674 aaPredicted RBP21.04■□□□□ 0.96
LINC00475-202ENST00000416438 AQRO60306 1485 aaKnown RBP eCLIP21.03■□□□□ 0.96
LINC00475-202ENST00000416438 MTUS2Q5JR59 1369 aa21.03■□□□□ 0.96
LINC00475-202ENST00000416438 FMN1Q68DA7 1419 aa21.02■□□□□ 0.96
LINC00475-202ENST00000416438 FGD6Q6ZV73 1430 aa21.02■□□□□ 0.96
LINC00475-202ENST00000416438 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21■□□□□ 0.95
LINC00475-202ENST00000416438 PTPRKQ15262 1439 aa21■□□□□ 0.95
LINC00475-202ENST00000416438 SNAPC4Q5SXM2 1469 aa20.99■□□□□ 0.95
LINC00475-202ENST00000416438 TIMELESSQ9UNS1 1208 aa20.99■□□□□ 0.95
LINC00475-202ENST00000416438 SAMD9Q5K651 1589 aa20.95■□□□□ 0.94
LINC00475-202ENST00000416438 TARBP1Q13395 1621 aaKnown RBP20.95■□□□□ 0.94
LINC00475-202ENST00000416438 CCDC18Q5T9S5 1454 aa20.93■□□□□ 0.94
LINC00475-202ENST00000416438 TONSLQ96HA7 1378 aa20.91■□□□□ 0.94
LINC00475-202ENST00000416438 LRRIQ1Q96JM4 1722 aa20.9■□□□□ 0.94
LINC00475-202ENST00000416438 NCOA2Q15596 1464 aa20.9■□□□□ 0.94
LINC00475-202ENST00000416438 HFM1A2PYH4 1435 aa20.88■□□□□ 0.93
LINC00475-202ENST00000416438 GRIN2BQ13224 1484 aa20.87■□□□□ 0.93
LINC00475-202ENST00000416438 CHIC2Q9UKJ5 165 aa20.87■□□□□ 0.93
LINC00475-202ENST00000416438 MYOM3Q5VTT5 1437 aa20.86■□□□□ 0.93
LINC00475-202ENST00000416438 BCANQ96GW7 911 aa20.86■□□□□ 0.93
LINC00475-202ENST00000416438 RRP7BPQ9NSQ0 103 aa20.86■□□□□ 0.93
LINC00475-202ENST00000416438 NAIPQ13075 1403 aa20.86■□□□□ 0.93
LINC00475-202ENST00000416438 UACAQ9BZF9 1416 aa20.86■□□□□ 0.93
LINC00475-202ENST00000416438 ARID3CA6NKF2 412 aa20.84■□□□□ 0.93
LINC00475-202ENST00000416438 ANP32CO43423 234 aa20.84■□□□□ 0.93
LINC00475-202ENST00000416438 PBRM1Q86U86 1689 aa20.84■□□□□ 0.93
LINC00475-202ENST00000416438 PTPN23Q9H3S7 1636 aa20.83■□□□□ 0.93
LINC00475-202ENST00000416438 TRIM52Q96A61 297 aa20.83■□□□□ 0.92
LINC00475-202ENST00000416438 MRC2Q9UBG0 1479 aa20.81■□□□□ 0.92
LINC00475-202ENST00000416438 FKBP8Q14318 412 aa20.79■□□□□ 0.92
LINC00475-202ENST00000416438 MAGI3Q5TCQ9 1506 aa20.79■□□□□ 0.92
LINC00475-202ENST00000416438 TSHZ2Q9NRE2 1034 aa20.78■□□□□ 0.92
LINC00475-202ENST00000416438 CCER2I3L3R5 266 aa20.77■□□□□ 0.92
LINC00475-202ENST00000416438 ADAMTS12P58397 1594 aa20.77■□□□□ 0.91
LINC00475-202ENST00000416438 THOC2Q8NI27 1593 aaKnown RBP20.77■□□□□ 0.91
LINC00475-202ENST00000416438 SUPT6HQ7KZ85 1726 aaKnown RBP20.76■□□□□ 0.91
LINC00475-202ENST00000416438 IQGAP2Q13576 1575 aa20.75■□□□□ 0.91
LINC00475-202ENST00000416438 EHBP1L1Q8N3D4 1523 aa20.75■□□□□ 0.91
LINC00475-202ENST00000416438 ZNF608Q9ULD9 1512 aaPredicted RBP20.74■□□□□ 0.91
LINC00475-202ENST00000416438 UGGT2Q9NYU1 1516 aa20.73■□□□□ 0.91
LINC00475-202ENST00000416438 ARHGEF11O15085 1522 aa20.69■□□□□ 0.9
LINC00475-202ENST00000416438 MYT1Q01538 1121 aa20.68■□□□□ 0.9
LINC00475-202ENST00000416438 FOXD1Q16676 465 aa20.68■□□□□ 0.9
LINC00475-202ENST00000416438 KDM5BQ9UGL1 1544 aa20.68■□□□□ 0.9
LINC00475-202ENST00000416438 HECW1Q76N89 1606 aa20.68■□□□□ 0.9
LINC00475-202ENST00000416438 CDK13Q14004 1512 aaKnown RBP20.67■□□□□ 0.9
LINC00475-202ENST00000416438 EPRSP07814 1512 aaKnown RBP20.67■□□□□ 0.9
LINC00475-202ENST00000416438 DENND4BO75064 1496 aaPredicted RBP20.66■□□□□ 0.9
LINC00475-202ENST00000416438 IFT140Q96RY7 1462 aa20.65■□□□□ 0.9
LINC00475-202ENST00000416438 HSPA5P11021 654 aaKnown RBP20.65■□□□□ 0.9
LINC00475-202ENST00000416438 KDM6BO15054 1643 aa20.64■□□□□ 0.89
LINC00475-202ENST00000416438 MPHOSPH9Q99550 1183 aa20.64■□□□□ 0.89
LINC00475-202ENST00000416438 TCOF1Q13428 1488 aaKnown RBP20.63■□□□□ 0.89
LINC00475-202ENST00000416438 WDR62O43379 1518 aa20.62■□□□□ 0.89
LINC00475-202ENST00000416438 WASHC2AQ641Q2 1341 aa20.62■□□□□ 0.89
LINC00475-202ENST00000416438 NEFLP07196 543 aa20.61■□□□□ 0.89
LINC00475-202ENST00000416438 L3MBTL2Q969R5 705 aa20.59■□□□□ 0.89
LINC00475-202ENST00000416438 ZNF644Q9H582 1327 aaPredicted RBP20.57■□□□□ 0.88
LINC00475-202ENST00000416438 EIF4G2P78344 907 aaKnown RBP eCLIP20.56■□□□□ 0.88
LINC00475-202ENST00000416438 HNRNPUQ00839 825 aaKnown RBP eCLIP20.55■□□□□ 0.88
LINC00475-202ENST00000416438 KIAA0586Q9BVV6 1533 aa20.55■□□□□ 0.88
LINC00475-202ENST00000416438 MIA2Q96PC5 1412 aa20.55■□□□□ 0.88
LINC00475-202ENST00000416438 DISP1Q96F81 1524 aa20.55■□□□□ 0.88
LINC00475-202ENST00000416438 EIF4G3O43432 1585 aaKnown RBP20.54■□□□□ 0.88
LINC00475-202ENST00000416438 C11orf95C9JLR9 678 aaPredicted RBP20.53■□□□□ 0.88
LINC00475-202ENST00000416438 KIAA0556O60303 1618 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms