RNA–Protein interactions for RNA: ENST00000415585.6

CSTF2-203, Transcript of cleavage stimulation factor subunit 2, humanhuman

TSL 1 (best) BASIC

Gene CSTF2, Length 2,074 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2-203ENST00000415585 GTF3C3Q9Y5Q9 886 aa19.64■□□□□ 0.73
CSTF2-203ENST00000415585 CCNB3Q8WWL7 1395 aa19.63■□□□□ 0.73
CSTF2-203ENST00000415585 MIER1Q8N108 512 aa19.62■□□□□ 0.73
CSTF2-203ENST00000415585 TIAM1Q13009 1591 aa19.61■□□□□ 0.73
CSTF2-203ENST00000415585 MAP3K1Q13233 1512 aa19.61■□□□□ 0.73
CSTF2-203ENST00000415585 YTHDC1Q96MU7 727 aaKnown RBP19.53■□□□□ 0.72
CSTF2-203ENST00000415585 ABCA10Q8WWZ4 1543 aa19.53■□□□□ 0.72
CSTF2-203ENST00000415585 LRRC9Q6ZRR7 1453 aa19.51■□□□□ 0.71
CSTF2-203ENST00000415585 CFAP43Q8NDM7 1665 aa19.5■□□□□ 0.71
CSTF2-203ENST00000415585 FHAD1B1AJZ9 1412 aa19.5■□□□□ 0.71
CSTF2-203ENST00000415585 MRC2Q9UBG0 1479 aa19.49■□□□□ 0.71
CSTF2-203ENST00000415585 ITGAEP38570 1179 aa19.48■□□□□ 0.71
CSTF2-203ENST00000415585 PCF11O94913 1555 aaKnown RBP19.48■□□□□ 0.71
CSTF2-203ENST00000415585 TDRD9Q8NDG6 1382 aaKnown RBP19.46■□□□□ 0.71
CSTF2-203ENST00000415585 RAB3GAP2Q9H2M9 1393 aa19.45■□□□□ 0.7
CSTF2-203ENST00000415585 CUL7Q14999 1698 aa19.44■□□□□ 0.7
CSTF2-203ENST00000415585 PHLDB1Q86UU1 1377 aa19.43■□□□□ 0.7
CSTF2-203ENST00000415585 WDR97A6NE52 1622 aa19.43■□□□□ 0.7
CSTF2-203ENST00000415585 CTTNBP2Q8WZ74 1663 aa19.42■□□□□ 0.7
CSTF2-203ENST00000415585 ERCC6Q03468 1493 aa19.42■□□□□ 0.7
CSTF2-203ENST00000415585 EFCAB5A4FU69 1503 aa19.41■□□□□ 0.7
CSTF2-203ENST00000415585 TARBP1Q13395 1621 aaKnown RBP19.41■□□□□ 0.7
CSTF2-203ENST00000415585 MAPKBP1O60336 1514 aa19.4■□□□□ 0.7
CSTF2-203ENST00000415585 P3H3Q8IVL6 736 aa19.4■□□□□ 0.7
CSTF2-203ENST00000415585 FHOD3Q2V2M9 1422 aa19.4■□□□□ 0.7
CSTF2-203ENST00000415585 WDR62O43379 1518 aa19.39■□□□□ 0.69
CSTF2-203ENST00000415585 FYCO1Q9BQS8 1478 aa19.38■□□□□ 0.69
CSTF2-203ENST00000415585 SETD5Q9C0A6 1442 aa19.38■□□□□ 0.69
CSTF2-203ENST00000415585 ABCA5Q8WWZ7 1642 aa19.36■□□□□ 0.69
CSTF2-203ENST00000415585 AQRO60306 1485 aaKnown RBP eCLIP19.35■□□□□ 0.69
CSTF2-203ENST00000415585 CASKIN1Q8WXD9 1431 aa19.35■□□□□ 0.69
CSTF2-203ENST00000415585 GAPVD1Q14C86 1478 aa19.34■□□□□ 0.69
CSTF2-203ENST00000415585 FAM50AQ14320 339 aaKnown RBP19.32■□□□□ 0.68
CSTF2-203ENST00000415585 THOC2Q8NI27 1593 aaKnown RBP19.32■□□□□ 0.68
CSTF2-203ENST00000415585 ATP1B4Q9UN42 357 aaPredicted RBP19.32■□□□□ 0.68
CSTF2-203ENST00000415585 ZNF608Q9ULD9 1512 aaPredicted RBP19.29■□□□□ 0.68
CSTF2-203ENST00000415585 FMN1Q68DA7 1419 aa19.27■□□□□ 0.68
CSTF2-203ENST00000415585 IFT140Q96RY7 1462 aa19.26■□□□□ 0.67
CSTF2-203ENST00000415585 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.26■□□□□ 0.67
CSTF2-203ENST00000415585 SNAPC4Q5SXM2 1469 aa19.25■□□□□ 0.67
CSTF2-203ENST00000415585 SAMD9Q5K651 1589 aa19.24■□□□□ 0.67
CSTF2-203ENST00000415585 LRRIQ1Q96JM4 1722 aa19.21■□□□□ 0.67
CSTF2-203ENST00000415585 FGD6Q6ZV73 1430 aa19.19■□□□□ 0.66
CSTF2-203ENST00000415585 SIN3AQ96ST3 1273 aa19.18■□□□□ 0.66
CSTF2-203ENST00000415585 PBRM1Q86U86 1689 aa19.18■□□□□ 0.66
CSTF2-203ENST00000415585 GRIN2BQ13224 1484 aa19.15■□□□□ 0.66
CSTF2-203ENST00000415585 MTUS2Q5JR59 1369 aa19.14■□□□□ 0.66
CSTF2-203ENST00000415585 TIMELESSQ9UNS1 1208 aa19.13■□□□□ 0.65
CSTF2-203ENST00000415585 EIF4G3O43432 1585 aaKnown RBP19.12■□□□□ 0.65
CSTF2-203ENST00000415585 SUPT6HQ7KZ85 1726 aaKnown RBP19.1■□□□□ 0.65
CSTF2-203ENST00000415585 ADAMTS12P58397 1594 aa19.1■□□□□ 0.65
CSTF2-203ENST00000415585 NCOA2Q15596 1464 aa19.09■□□□□ 0.65
CSTF2-203ENST00000415585 CCDC18Q5T9S5 1454 aa19.08■□□□□ 0.65
CSTF2-203ENST00000415585 PTPRKQ15262 1439 aa19.08■□□□□ 0.64
CSTF2-203ENST00000415585 EHBP1L1Q8N3D4 1523 aa19.07■□□□□ 0.64
CSTF2-203ENST00000415585 PTPN23Q9H3S7 1636 aa19.07■□□□□ 0.64
CSTF2-203ENST00000415585 HFM1A2PYH4 1435 aa19.07■□□□□ 0.64
CSTF2-203ENST00000415585 MYOM3Q5VTT5 1437 aa19.07■□□□□ 0.64
CSTF2-203ENST00000415585 PPP1R15AO75807 674 aaPredicted RBP19.04■□□□□ 0.64
CSTF2-203ENST00000415585 UACAQ9BZF9 1416 aa19.03■□□□□ 0.64
CSTF2-203ENST00000415585 UGGT2Q9NYU1 1516 aa19.02■□□□□ 0.64
CSTF2-203ENST00000415585 ARHGEF11O15085 1522 aa19.02■□□□□ 0.64
CSTF2-203ENST00000415585 MAGI3Q5TCQ9 1506 aa19.01■□□□□ 0.63
CSTF2-203ENST00000415585 NAIPQ13075 1403 aa19.01■□□□□ 0.63
CSTF2-203ENST00000415585 DDX10Q13206 875 aaKnown RBP19■□□□□ 0.63
CSTF2-203ENST00000415585 KCNH8Q96L42 1107 aa19■□□□□ 0.63
CSTF2-203ENST00000415585 HECW1Q76N89 1606 aa18.98■□□□□ 0.63
CSTF2-203ENST00000415585 IQGAP2Q13576 1575 aa18.98■□□□□ 0.63
CSTF2-203ENST00000415585 SUPT16HQ9Y5B9 1047 aaKnown RBP18.96■□□□□ 0.63
CSTF2-203ENST00000415585 TONSLQ96HA7 1378 aa18.96■□□□□ 0.63
CSTF2-203ENST00000415585 GRIN2AQ12879 1464 aa18.94■□□□□ 0.62
CSTF2-203ENST00000415585 MAGI1Q96QZ7 1491 aaPredicted RBP18.94■□□□□ 0.62
CSTF2-203ENST00000415585 TCOF1Q13428 1488 aaKnown RBP18.94■□□□□ 0.62
CSTF2-203ENST00000415585 FBLN2P98095 1184 aa18.93■□□□□ 0.62
CSTF2-203ENST00000415585 CHMP7Q8WUX9 453 aaPredicted RBP18.93■□□□□ 0.62
CSTF2-203ENST00000415585 GCC2Q8IWJ2 1684 aa18.92■□□□□ 0.62
CSTF2-203ENST00000415585 HIRIP3Q9BW71 556 aaPredicted RBP18.92■□□□□ 0.62
CSTF2-203ENST00000415585 EPRSP07814 1512 aaKnown RBP18.92■□□□□ 0.62
CSTF2-203ENST00000415585 SYNJ2O15056 1496 aa18.91■□□□□ 0.62
CSTF2-203ENST00000415585 CDK13Q14004 1512 aaKnown RBP18.87■□□□□ 0.61
CSTF2-203ENST00000415585 KDM5BQ9UGL1 1544 aa18.87■□□□□ 0.61
CSTF2-203ENST00000415585 KIAA0586Q9BVV6 1533 aa18.86■□□□□ 0.61
CSTF2-203ENST00000415585 CEP170Q5SW79 1584 aa18.85■□□□□ 0.61
CSTF2-203ENST00000415585 AKNAQ7Z591 1439 aa18.85■□□□□ 0.61
CSTF2-203ENST00000415585 RRP7BPQ9NSQ0 103 aa18.85■□□□□ 0.61
CSTF2-203ENST00000415585 MIA2Q96PC5 1412 aa18.84■□□□□ 0.61
CSTF2-203ENST00000415585 CHIC2Q9UKJ5 165 aa18.83■□□□□ 0.6
CSTF2-203ENST00000415585 KDM6BO15054 1643 aa18.83■□□□□ 0.6
CSTF2-203ENST00000415585 CCER2I3L3R5 266 aa18.82■□□□□ 0.6
CSTF2-203ENST00000415585 DENND4BO75064 1496 aaPredicted RBP18.82■□□□□ 0.6
CSTF2-203ENST00000415585 ANP32CO43423 234 aa18.81■□□□□ 0.6
CSTF2-203ENST00000415585 NUP160Q12769 1436 aa18.8■□□□□ 0.6
CSTF2-203ENST00000415585 KIAA0556O60303 1618 aa18.78■□□□□ 0.6
CSTF2-203ENST00000415585 DISP1Q96F81 1524 aa18.78■□□□□ 0.6
CSTF2-203ENST00000415585 ARID3CA6NKF2 412 aa18.77■□□□□ 0.59
CSTF2-203ENST00000415585 TRIM52Q96A61 297 aa18.75■□□□□ 0.59
CSTF2-203ENST00000415585 JPH4Q96JJ6 628 aa18.73■□□□□ 0.59
CSTF2-203ENST00000415585 RAPGEF6Q8TEU7 1601 aa18.72■□□□□ 0.59
CSTF2-203ENST00000415585 NUP153P49790 1475 aaKnown RBP18.71■□□□□ 0.59
CSTF2-203ENST00000415585 DNMT1P26358 1616 aaKnown RBP18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 145.1 ms