RNA–Protein interactions for RNA: ENST00000415430.7

VSIG1-202, Transcript of V-set and immunoglobulin domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene VSIG1, Length 3,236 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSIG1-202ENST00000415430 PPARGC1BQ86YN6 1023 aaKnown RBP13.3□□□□□ -0.28
VSIG1-202ENST00000415430 GRIN2BQ13224 1484 aa13.23□□□□□ -0.29
VSIG1-202ENST00000415430 UGGT2Q9NYU1 1516 aa13.22□□□□□ -0.29
VSIG1-202ENST00000415430 EFCAB5A4FU69 1503 aa13.22□□□□□ -0.29
VSIG1-202ENST00000415430 NUP160Q12769 1436 aa13.21□□□□□ -0.29
VSIG1-202ENST00000415430 PPP6R1Q9UPN7 881 aa13.2□□□□□ -0.3
VSIG1-202ENST00000415430 KIF27Q86VH2 1401 aa13.18□□□□□ -0.3
VSIG1-202ENST00000415430 CEP170Q5SW79 1584 aa13.18□□□□□ -0.3
VSIG1-202ENST00000415430 GAPVD1Q14C86 1478 aa13.17□□□□□ -0.3
VSIG1-202ENST00000415430 CFAP43Q8NDM7 1665 aa13.17□□□□□ -0.3
VSIG1-202ENST00000415430 LRRIQ1Q96JM4 1722 aa13.16□□□□□ -0.3
VSIG1-202ENST00000415430 SYNJ2O15056 1496 aa13.16□□□□□ -0.3
VSIG1-202ENST00000415430 SOGA1O94964 1423 aa13.16□□□□□ -0.3
VSIG1-202ENST00000415430 FHAD1B1AJZ9 1412 aa13.15□□□□□ -0.3
VSIG1-202ENST00000415430 MAP3K1Q13233 1512 aa13.15□□□□□ -0.31
VSIG1-202ENST00000415430 RAD54L2Q9Y4B4 1467 aa13.13□□□□□ -0.31
VSIG1-202ENST00000415430 IGF1RP08069 1367 aa13.11□□□□□ -0.31
VSIG1-202ENST00000415430 ERCC6Q03468 1493 aa13.11□□□□□ -0.31
VSIG1-202ENST00000415430 AQRO60306 1485 aaKnown RBP eCLIP13.11□□□□□ -0.31
VSIG1-202ENST00000415430 RAPGEF2Q9Y4G8 1499 aa13.11□□□□□ -0.31
VSIG1-202ENST00000415430 GOLGA3Q08378 1498 aa13.1□□□□□ -0.31
VSIG1-202ENST00000415430 ADCY10Q96PN6 1610 aa13.09□□□□□ -0.31
VSIG1-202ENST00000415430 ZNF608Q9ULD9 1512 aaPredicted RBP13.09□□□□□ -0.31
VSIG1-202ENST00000415430 GRIN2AQ12879 1464 aa13.09□□□□□ -0.31
VSIG1-202ENST00000415430 IQGAP2Q13576 1575 aa13.08□□□□□ -0.32
VSIG1-202ENST00000415430 PLEKHG5O94827 1062 aa13.07□□□□□ -0.32
VSIG1-202ENST00000415430 KIAA0556O60303 1618 aa13.07□□□□□ -0.32
VSIG1-202ENST00000415430 ANP32EQ9BTT0 268 aa13.04□□□□□ -0.32
VSIG1-202ENST00000415430 SNAPC4Q5SXM2 1469 aa13.03□□□□□ -0.32
VSIG1-202ENST00000415430 TNIKQ9UKE5 1360 aa13.03□□□□□ -0.32
VSIG1-202ENST00000415430 KIAA0586Q9BVV6 1533 aa13.01□□□□□ -0.33
VSIG1-202ENST00000415430 ACIN1Q9UKV3 1341 aaKnown RBP13□□□□□ -0.33
VSIG1-202ENST00000415430 ABCA8O94911 1581 aa12.99□□□□□ -0.33
VSIG1-202ENST00000415430 GTF3C3Q9Y5Q9 886 aa12.97□□□□□ -0.33
VSIG1-202ENST00000415430 DISP1Q96F81 1524 aa12.96□□□□□ -0.33
VSIG1-202ENST00000415430 UHRF1BP1LA0JNW5 1464 aa12.95□□□□□ -0.34
VSIG1-202ENST00000415430 ARHGEF11O15085 1522 aa12.94□□□□□ -0.34
VSIG1-202ENST00000415430 KDM5BQ9UGL1 1544 aa12.94□□□□□ -0.34
VSIG1-202ENST00000415430 SLC4A1APQ9BWU0 796 aaKnown RBP12.93□□□□□ -0.34
VSIG1-202ENST00000415430 UBE2Q2Q8WVN8 375 aa12.92□□□□□ -0.34
VSIG1-202ENST00000415430 ARAP1Q96P48 1450 aa12.92□□□□□ -0.34
VSIG1-202ENST00000415430 PODXL2Q9NZ53 605 aa12.91□□□□□ -0.34
VSIG1-202ENST00000415430 CARMIL1Q5VZK9 1371 aa12.87□□□□□ -0.35
VSIG1-202ENST00000415430 ARHGAP35Q9NRY4 1499 aa12.87□□□□□ -0.35
VSIG1-202ENST00000415430 RAPGEF6Q8TEU7 1601 aa12.87□□□□□ -0.35
VSIG1-202ENST00000415430 HECW1Q76N89 1606 aa12.86□□□□□ -0.35
VSIG1-202ENST00000415430 FYCO1Q9BQS8 1478 aa12.86□□□□□ -0.35
VSIG1-202ENST00000415430 ANO8Q9HCE9 1232 aaPredicted RBP12.86□□□□□ -0.35
VSIG1-202ENST00000415430 NEUROD1Q13562 356 aa12.84□□□□□ -0.35
VSIG1-202ENST00000415430 RTN4Q9NQC3 1192 aaKnown RBP12.83□□□□□ -0.36
VSIG1-202ENST00000415430 PCF11O94913 1555 aaKnown RBP12.82□□□□□ -0.36
VSIG1-202ENST00000415430 PCGF6Q9BYE7 350 aa12.82□□□□□ -0.36
VSIG1-202ENST00000415430 ARAP3Q8WWN8 1544 aa12.82□□□□□ -0.36
VSIG1-202ENST00000415430 TIAM1Q13009 1591 aa12.79□□□□□ -0.36
VSIG1-202ENST00000415430 CROCC2H7BZ55 1655 aa12.78□□□□□ -0.36
VSIG1-202ENST00000415430 GLI2P10070 1586 aa12.78□□□□□ -0.36
VSIG1-202ENST00000415430 BCORL1Q5H9F3 1711 aa12.77□□□□□ -0.36
VSIG1-202ENST00000415430 TRIM41Q8WV44 630 aa12.77□□□□□ -0.37
VSIG1-202ENST00000415430 CASKIN1Q8WXD9 1431 aa12.76□□□□□ -0.37
VSIG1-202ENST00000415430 CCDC18Q5T9S5 1454 aa12.75□□□□□ -0.37
VSIG1-202ENST00000415430 MAPKBP1O60336 1514 aa12.75□□□□□ -0.37
VSIG1-202ENST00000415430 ZCCHC11Q5TAX3 1644 aaKnown RBP12.75□□□□□ -0.37
VSIG1-202ENST00000415430 ABCC2Q92887 1545 aa12.75□□□□□ -0.37
VSIG1-202ENST00000415430 ZBTB22O15209 634 aa12.74□□□□□ -0.37
VSIG1-202ENST00000415430 RIMBP3CA6NJZ7 1639 aa12.74□□□□□ -0.37
VSIG1-202ENST00000415430 RIMBP3BA6NNM3 1639 aa12.74□□□□□ -0.37
VSIG1-202ENST00000415430 RIMBP3Q9UFD9 1639 aa12.74□□□□□ -0.37
VSIG1-202ENST00000415430 PKNOX2Q96KN3 472 aa12.73□□□□□ -0.37
VSIG1-202ENST00000415430 ITSN2Q9NZM3 1697 aa12.73□□□□□ -0.37
VSIG1-202ENST00000415430 TDRD9Q8NDG6 1382 aaKnown RBP12.73□□□□□ -0.37
VSIG1-202ENST00000415430 CEP162Q5TB80 1403 aa12.73□□□□□ -0.37
VSIG1-202ENST00000415430 NCBP3Q53F19 620 aaKnown RBP12.72□□□□□ -0.37
VSIG1-202ENST00000415430 VPS8Q8N3P4 1428 aa12.72□□□□□ -0.37
VSIG1-202ENST00000415430 MAP3K4Q9Y6R4 1608 aa12.71□□□□□ -0.37
VSIG1-202ENST00000415430 ABCA9Q8IUA7 1624 aa12.71□□□□□ -0.37
VSIG1-202ENST00000415430 CDC42BPAQ5VT25 1732 aa12.69□□□□□ -0.38
VSIG1-202ENST00000415430 PREX2Q70Z35 1606 aa12.69□□□□□ -0.38
VSIG1-202ENST00000415430 EHBP1L1Q8N3D4 1523 aa12.69□□□□□ -0.38
VSIG1-202ENST00000415430 PPRC1Q5VV67 1664 aaKnown RBP12.68□□□□□ -0.38
VSIG1-202ENST00000415430 ERCC6L2Q5T890 1561 aa12.68□□□□□ -0.38
VSIG1-202ENST00000415430 ZEB1P37275 1124 aaPredicted RBP12.68□□□□□ -0.38
VSIG1-202ENST00000415430 SUPT6HQ7KZ85 1726 aaKnown RBP12.67□□□□□ -0.38
VSIG1-202ENST00000415430 RANGAP1P46060 587 aaPredicted RBP12.67□□□□□ -0.38
VSIG1-202ENST00000415430 MAST1Q9Y2H9 1570 aa12.66□□□□□ -0.38
VSIG1-202ENST00000415430 FMN1Q68DA7 1419 aa12.66□□□□□ -0.38
VSIG1-202ENST00000415430 KIF13AQ9H1H9 1805 aa12.66□□□□□ -0.38
VSIG1-202ENST00000415430 CFAP74Q9C0B2 1584 aa12.65□□□□□ -0.38
VSIG1-202ENST00000415430 FOXD1Q16676 465 aa12.64□□□□□ -0.39
VSIG1-202ENST00000415430 CDC42BPBQ9Y5S2 1711 aa12.64□□□□□ -0.39
VSIG1-202ENST00000415430 NUP153P49790 1475 aaKnown RBP12.63□□□□□ -0.39
VSIG1-202ENST00000415430 TCOF1Q13428 1488 aaKnown RBP12.63□□□□□ -0.39
VSIG1-202ENST00000415430 LOC105371045A0A1W2PR82 267 aa12.63□□□□□ -0.39
VSIG1-202ENST00000415430 MAGI3Q5TCQ9 1506 aa12.63□□□□□ -0.39
VSIG1-202ENST00000415430 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.63□□□□□ -0.39
VSIG1-202ENST00000415430 ADGBQ8N7X0 1667 aa12.62□□□□□ -0.39
VSIG1-202ENST00000415430 MYO5CQ9NQX4 1742 aa12.62□□□□□ -0.39
VSIG1-202ENST00000415430 GCC2Q8IWJ2 1684 aa12.6□□□□□ -0.39
VSIG1-202ENST00000415430 CLIP1P30622 1438 aa12.6□□□□□ -0.39
VSIG1-202ENST00000415430 ARHGEF5Q12774 1597 aa12.59□□□□□ -0.39
VSIG1-202ENST00000415430 ABCC10Q5T3U5 1492 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms