RNA–Protein interactions for RNA: ENST00000415374.5

PNPT1-202, Transcript of polyribonucleotide nucleotidyltransferase 1, humanhuman

TSL 5

Gene PNPT1, Length 3,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNPT1-202ENST00000415374 ACIN1Q9UKV3 1341 aaKnown RBP12.45□□□□□ -0.42
PNPT1-202ENST00000415374 CCNB3Q8WWL7 1395 aa12.45□□□□□ -0.42
PNPT1-202ENST00000415374 POLA1P09884 1462 aaPredicted RBP12.41□□□□□ -0.42
PNPT1-202ENST00000415374 DHX57Q6P158 1386 aaKnown RBP12.4□□□□□ -0.42
PNPT1-202ENST00000415374 ERICH3Q5RHP9 1530 aa12.39□□□□□ -0.43
PNPT1-202ENST00000415374 PHLDB1Q86UU1 1377 aa12.39□□□□□ -0.43
PNPT1-202ENST00000415374 CNGB1Q14028 1251 aaPredicted RBP12.39□□□□□ -0.43
PNPT1-202ENST00000415374 TOPBP1Q92547 1522 aa12.38□□□□□ -0.43
PNPT1-202ENST00000415374 RAB3GAP2Q9H2M9 1393 aa12.37□□□□□ -0.43
PNPT1-202ENST00000415374 RRP7BPQ9NSQ0 103 aa12.37□□□□□ -0.43
PNPT1-202ENST00000415374 MTUS2Q5JR59 1369 aa12.36□□□□□ -0.43
PNPT1-202ENST00000415374 PRDM2Q13029 1718 aa12.36□□□□□ -0.43
PNPT1-202ENST00000415374 TRIM52Q96A61 297 aa12.35□□□□□ -0.43
PNPT1-202ENST00000415374 AQRO60306 1485 aaKnown RBP eCLIP12.34□□□□□ -0.433e-10■■■■□ 22.4
PNPT1-202ENST00000415374 DDX10Q13206 875 aaKnown RBP12.32□□□□□ -0.44
PNPT1-202ENST00000415374 URB2Q14146 1524 aaKnown RBP12.32□□□□□ -0.44
PNPT1-202ENST00000415374 AEBP2Q6ZN18 517 aaPredicted RBP12.31□□□□□ -0.44
PNPT1-202ENST00000415374 KCNH8Q96L42 1107 aa12.31□□□□□ -0.44
PNPT1-202ENST00000415374 ZNF777Q9ULD5 760 aaPredicted RBP12.31□□□□□ -0.44
PNPT1-202ENST00000415374 FOXD1Q16676 465 aa12.29□□□□□ -0.44
PNPT1-202ENST00000415374 PDS5BQ9NTI5 1447 aa12.29□□□□□ -0.44
PNPT1-202ENST00000415374 GAPVD1Q14C86 1478 aa12.28□□□□□ -0.44
PNPT1-202ENST00000415374 FHAD1B1AJZ9 1412 aa12.27□□□□□ -0.45
PNPT1-202ENST00000415374 LAMC3Q9Y6N6 1575 aa12.27□□□□□ -0.45
PNPT1-202ENST00000415374 LRRC9Q6ZRR7 1453 aa12.27□□□□□ -0.45
PNPT1-202ENST00000415374 DNMBPQ6XZF7 1577 aa12.25□□□□□ -0.45
PNPT1-202ENST00000415374 RRBP1Q9P2E9 1410 aaKnown RBP12.25□□□□□ -0.45
PNPT1-202ENST00000415374 PCF11O94913 1555 aaKnown RBP12.24□□□□□ -0.45
PNPT1-202ENST00000415374 CHMP7Q8WUX9 453 aaPredicted RBP12.24□□□□□ -0.45
PNPT1-202ENST00000415374 SETD5Q9C0A6 1442 aa12.23□□□□□ -0.45
PNPT1-202ENST00000415374 POLR3GLQ9BT43 218 aa12.23□□□□□ -0.45
PNPT1-202ENST00000415374 ABCA10Q8WWZ4 1543 aa12.22□□□□□ -0.45
PNPT1-202ENST00000415374 TIAM1Q13009 1591 aa12.22□□□□□ -0.45
PNPT1-202ENST00000415374 ZNF326Q5BKZ1 582 aaKnown RBP12.21□□□□□ -0.45
PNPT1-202ENST00000415374 BCANQ96GW7 911 aa12.2□□□□□ -0.46
PNPT1-202ENST00000415374 ERCC6Q03468 1493 aa12.2□□□□□ -0.46
PNPT1-202ENST00000415374 ZNF644Q9H582 1327 aaPredicted RBP12.19□□□□□ -0.46
PNPT1-202ENST00000415374 ZNF608Q9ULD9 1512 aaPredicted RBP12.19□□□□□ -0.46
PNPT1-202ENST00000415374 SENP3-EIF4A1A0A087X0R7 540 aa12.17□□□□□ -0.46
PNPT1-202ENST00000415374 TONSLQ96HA7 1378 aa12.17□□□□□ -0.46
PNPT1-202ENST00000415374 FMN1Q68DA7 1419 aa12.16□□□□□ -0.46
PNPT1-202ENST00000415374 KIF21AQ7Z4S6 1674 aa12.14□□□□□ -0.47
PNPT1-202ENST00000415374 CASKIN1Q8WXD9 1431 aa12.13□□□□□ -0.47
PNPT1-202ENST00000415374 FGD6Q6ZV73 1430 aa12.13□□□□□ -0.47
PNPT1-202ENST00000415374 PTPRKQ15262 1439 aa12.12□□□□□ -0.47
PNPT1-202ENST00000415374 CLSPNQ9HAW4 1339 aa12.12□□□□□ -0.47
PNPT1-202ENST00000415374 CDK13Q14004 1512 aaKnown RBP12.11□□□□□ -0.47
PNPT1-202ENST00000415374 NCOA2Q15596 1464 aa12.1□□□□□ -0.47
PNPT1-202ENST00000415374 FYCO1Q9BQS8 1478 aa12.09□□□□□ -0.47
PNPT1-202ENST00000415374 MAPKBP1O60336 1514 aa12.08□□□□□ -0.48
PNPT1-202ENST00000415374 PPP1R15AO75807 674 aaPredicted RBP12.07□□□□□ -0.48
PNPT1-202ENST00000415374 WDR97A6NE52 1622 aa12.07□□□□□ -0.48
PNPT1-202ENST00000415374 SLC4A1APQ9BWU0 796 aaKnown RBP12.06□□□□□ -0.48
PNPT1-202ENST00000415374 CFDP1Q9UEE9 299 aaPredicted RBP12.06□□□□□ -0.48
PNPT1-202ENST00000415374 CCDC18Q5T9S5 1454 aa12.06□□□□□ -0.48
PNPT1-202ENST00000415374 SNAPC4Q5SXM2 1469 aa12.04□□□□□ -0.48
PNPT1-202ENST00000415374 MRC2Q9UBG0 1479 aa12.04□□□□□ -0.48
PNPT1-202ENST00000415374 ANP32CO43423 234 aa12.04□□□□□ -0.48
PNPT1-202ENST00000415374 JPH4Q96JJ6 628 aa12.04□□□□□ -0.48
PNPT1-202ENST00000415374 MYOM3Q5VTT5 1437 aa12.04□□□□□ -0.48
PNPT1-202ENST00000415374 CDK11AQ9UQ88 783 aaPredicted RBP12.03□□□□□ -0.48
PNPT1-202ENST00000415374 MPHOSPH9Q99550 1183 aa12.02□□□□□ -0.49
PNPT1-202ENST00000415374 KDM2AQ9Y2K7 1162 aa12.02□□□□□ -0.49
PNPT1-202ENST00000415374 CUL7Q14999 1698 aa12.02□□□□□ -0.49
PNPT1-202ENST00000415374 EFCAB5A4FU69 1503 aa12.01□□□□□ -0.49
PNPT1-202ENST00000415374 GRIN2BQ13224 1484 aa12.01□□□□□ -0.49
PNPT1-202ENST00000415374 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.01□□□□□ -0.494e-6■■□□□ 11.9
PNPT1-202ENST00000415374 IRX6P78412 446 aaPredicted RBP12□□□□□ -0.49
PNPT1-202ENST00000415374 L3MBTL2Q969R5 705 aa12□□□□□ -0.49
PNPT1-202ENST00000415374 PRG4Q92954 1404 aaPredicted RBP12□□□□□ -0.49
PNPT1-202ENST00000415374 MAGI3Q5TCQ9 1506 aa12□□□□□ -0.49
PNPT1-202ENST00000415374 ABCA5Q8WWZ7 1642 aa11.99□□□□□ -0.49
PNPT1-202ENST00000415374 NAIPQ13075 1403 aa11.98□□□□□ -0.49
PNPT1-202ENST00000415374 CTTNBP2Q8WZ74 1663 aa11.98□□□□□ -0.49
PNPT1-202ENST00000415374 HSPA5P11021 654 aaKnown RBP11.98□□□□□ -0.49
PNPT1-202ENST00000415374 PLB1Q6P1J6 1458 aa11.98□□□□□ -0.49
PNPT1-202ENST00000415374 MYT1LQ9UL68 1186 aa11.98□□□□□ -0.49
PNPT1-202ENST00000415374 HNRNPMP52272 730 aaKnown RBP eCLIP11.97□□□□□ -0.49
PNPT1-202ENST00000415374 EPRSP07814 1512 aaKnown RBP11.97□□□□□ -0.49
PNPT1-202ENST00000415374 PLEKHD1A6NEE1 506 aa11.97□□□□□ -0.49
PNPT1-202ENST00000415374 FKBP8Q14318 412 aa11.96□□□□□ -0.49
PNPT1-202ENST00000415374 THOC2Q8NI27 1593 aaKnown RBP11.96□□□□□ -0.49
PNPT1-202ENST00000415374 IQGAP2Q13576 1575 aa11.96□□□□□ -0.49
PNPT1-202ENST00000415374 TARBP1Q13395 1621 aaKnown RBP11.96□□□□□ -0.5
PNPT1-202ENST00000415374 WDR62O43379 1518 aa11.96□□□□□ -0.5
PNPT1-202ENST00000415374 FAM9BQ8IZU0 186 aa11.95□□□□□ -0.5
PNPT1-202ENST00000415374 MAP3K1Q13233 1512 aa11.95□□□□□ -0.5
PNPT1-202ENST00000415374 CFAP43Q8NDM7 1665 aa11.95□□□□□ -0.5
PNPT1-202ENST00000415374 HNRNPUQ00839 825 aaKnown RBP eCLIP11.94□□□□□ -0.5
PNPT1-202ENST00000415374 RGL3Q3MIN7 710 aa11.94□□□□□ -0.5
PNPT1-202ENST00000415374 SUPT16HQ9Y5B9 1047 aaKnown RBP11.94□□□□□ -0.5
PNPT1-202ENST00000415374 HFM1A2PYH4 1435 aa11.93□□□□□ -0.5
PNPT1-202ENST00000415374 UACAQ9BZF9 1416 aa11.92□□□□□ -0.5
PNPT1-202ENST00000415374 PKD2Q13563 968 aa11.92□□□□□ -0.5
PNPT1-202ENST00000415374 SENP3Q9H4L4 574 aaPredicted RBP11.92□□□□□ -0.5
PNPT1-202ENST00000415374 IFT140Q96RY7 1462 aa11.92□□□□□ -0.5
PNPT1-202ENST00000415374 EIF4G2P78344 907 aaKnown RBP eCLIP11.91□□□□□ -0.5
PNPT1-202ENST00000415374 NBPF8Q3BBV2 869 aa11.9□□□□□ -0.5
PNPT1-202ENST00000415374 GRIN2AQ12879 1464 aa11.9□□□□□ -0.5
PNPT1-202ENST00000415374 PTPN23Q9H3S7 1636 aa11.9□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms