RNA–Protein interactions for RNA: ENST00000415191.6

C2CD3-205, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 2

Gene C2CD3, Length 2,587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-205ENST00000415191 FHAD1B1AJZ9 1412 aa28.44■■■□□ 2.14
C2CD3-205ENST00000415191 TOPBP1Q92547 1522 aa28.42■■■□□ 2.14
C2CD3-205ENST00000415191 P3H3Q8IVL6 736 aa28.42■■■□□ 2.14
C2CD3-205ENST00000415191 ABCA10Q8WWZ4 1543 aa28.42■■■□□ 2.14
C2CD3-205ENST00000415191 POLA1P09884 1462 aaPredicted RBP28.42■■■□□ 2.14
C2CD3-205ENST00000415191 NESP48681 1621 aa28.4■■■□□ 2.14
C2CD3-205ENST00000415191 RAB3GAP2Q9H2M9 1393 aa28.39■■■□□ 2.14
C2CD3-205ENST00000415191 PCF11O94913 1555 aaKnown RBP28.39■■■□□ 2.13
C2CD3-205ENST00000415191 PHLDB1Q86UU1 1377 aa28.37■■■□□ 2.13
C2CD3-205ENST00000415191 CFAP43Q8NDM7 1665 aa28.37■■■□□ 2.13
C2CD3-205ENST00000415191 ATP1B4Q9UN42 357 aaPredicted RBP28.33■■■□□ 2.13
C2CD3-205ENST00000415191 FHOD3Q2V2M9 1422 aa28.33■■■□□ 2.13
C2CD3-205ENST00000415191 CUL7Q14999 1698 aa28.3■■■□□ 2.12
C2CD3-205ENST00000415191 FAM50AQ14320 339 aaKnown RBP28.28■■■□□ 2.12
C2CD3-205ENST00000415191 SETD5Q9C0A6 1442 aa28.28■■■□□ 2.12
C2CD3-205ENST00000415191 EFCAB5A4FU69 1503 aa28.27■■■□□ 2.12
C2CD3-205ENST00000415191 MAPKBP1O60336 1514 aa28.27■■■□□ 2.12
C2CD3-205ENST00000415191 CTTNBP2Q8WZ74 1663 aa28.25■■■□□ 2.11
C2CD3-205ENST00000415191 FYCO1Q9BQS8 1478 aa28.24■■■□□ 2.11
C2CD3-205ENST00000415191 CASKIN1Q8WXD9 1431 aa28.21■■■□□ 2.11
C2CD3-205ENST00000415191 URB2Q14146 1524 aaKnown RBP28.19■■■□□ 2.1
C2CD3-205ENST00000415191 LAMC3Q9Y6N6 1575 aa28.18■■■□□ 2.1
C2CD3-205ENST00000415191 AQRO60306 1485 aaKnown RBP eCLIP28.18■■■□□ 2.1
C2CD3-205ENST00000415191 WDR97A6NE52 1622 aa28.17■■■□□ 2.1
C2CD3-205ENST00000415191 FMN1Q68DA7 1419 aa28.11■■■□□ 2.09
C2CD3-205ENST00000415191 TDRD9Q8NDG6 1382 aaKnown RBP28.1■■■□□ 2.09
C2CD3-205ENST00000415191 ABCA5Q8WWZ7 1642 aa28.08■■■□□ 2.09
C2CD3-205ENST00000415191 SIN3AQ96ST3 1273 aa28.06■■■□□ 2.08
C2CD3-205ENST00000415191 SNAPC4Q5SXM2 1469 aa28.05■■■□□ 2.08
C2CD3-205ENST00000415191 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.04■■■□□ 2.08
C2CD3-205ENST00000415191 GAPVD1Q14C86 1478 aa28.04■■■□□ 2.08
C2CD3-205ENST00000415191 PDS5BQ9NTI5 1447 aa28.01■■■□□ 2.07
C2CD3-205ENST00000415191 SAMD9Q5K651 1589 aa28■■■□□ 2.07
C2CD3-205ENST00000415191 FGD6Q6ZV73 1430 aa27.99■■■□□ 2.07
C2CD3-205ENST00000415191 MTUS2Q5JR59 1369 aa27.98■■■□□ 2.07
C2CD3-205ENST00000415191 LRRIQ1Q96JM4 1722 aa27.94■■■□□ 2.06
C2CD3-205ENST00000415191 DNAJC5BQ9UF47 199 aa27.94■■■□□ 2.06
C2CD3-205ENST00000415191 KIF21AQ7Z4S6 1674 aa27.93■■■□□ 2.06
C2CD3-205ENST00000415191 TIMELESSQ9UNS1 1208 aa27.9■■■□□ 2.06
C2CD3-205ENST00000415191 GRIN2BQ13224 1484 aa27.89■■■□□ 2.06
C2CD3-205ENST00000415191 NCOA2Q15596 1464 aa27.85■■■□□ 2.05
C2CD3-205ENST00000415191 CCDC18Q5T9S5 1454 aa27.84■■■□□ 2.05
C2CD3-205ENST00000415191 TARBP1Q13395 1621 aaKnown RBP27.84■■■□□ 2.05
C2CD3-205ENST00000415191 PTPRKQ15262 1439 aa27.84■■■□□ 2.05
C2CD3-205ENST00000415191 THOC2Q8NI27 1593 aaKnown RBP27.84■■■□□ 2.05
C2CD3-205ENST00000415191 MYOM3Q5VTT5 1437 aa27.82■■■□□ 2.04
C2CD3-205ENST00000415191 SUPT6HQ7KZ85 1726 aaKnown RBP27.81■■■□□ 2.04
C2CD3-205ENST00000415191 HFM1A2PYH4 1435 aa27.81■■■□□ 2.04
C2CD3-205ENST00000415191 PPP1R15AO75807 674 aaPredicted RBP27.8■■■□□ 2.04
C2CD3-205ENST00000415191 DDX10Q13206 875 aaKnown RBP27.79■■■□□ 2.04
C2CD3-205ENST00000415191 EHBP1L1Q8N3D4 1523 aa27.79■■■□□ 2.04
C2CD3-205ENST00000415191 PTPN23Q9H3S7 1636 aa27.78■■■□□ 2.04
C2CD3-205ENST00000415191 KCNH8Q96L42 1107 aa27.78■■■□□ 2.04
C2CD3-205ENST00000415191 UACAQ9BZF9 1416 aa27.75■■■□□ 2.03
C2CD3-205ENST00000415191 PBRM1Q86U86 1689 aa27.74■■■□□ 2.03
C2CD3-205ENST00000415191 NAIPQ13075 1403 aa27.72■■■□□ 2.03
C2CD3-205ENST00000415191 TONSLQ96HA7 1378 aa27.71■■■□□ 2.03
C2CD3-205ENST00000415191 HIRIP3Q9BW71 556 aaPredicted RBP27.71■■■□□ 2.03
C2CD3-205ENST00000415191 UGGT2Q9NYU1 1516 aa27.71■■■□□ 2.03
C2CD3-205ENST00000415191 MAGI3Q5TCQ9 1506 aa27.71■■■□□ 2.03
C2CD3-205ENST00000415191 SUPT16HQ9Y5B9 1047 aaKnown RBP27.68■■■□□ 2.02
C2CD3-205ENST00000415191 ARHGEF11O15085 1522 aa27.67■■■□□ 2.02
C2CD3-205ENST00000415191 IQGAP2Q13576 1575 aa27.66■■■□□ 2.02
C2CD3-205ENST00000415191 HECW1Q76N89 1606 aa27.65■■■□□ 2.02
C2CD3-205ENST00000415191 ADAMTS12P58397 1594 aa27.64■■■□□ 2.01
C2CD3-205ENST00000415191 EPRSP07814 1512 aaKnown RBP27.59■■■□□ 2.01
C2CD3-205ENST00000415191 RRP7BPQ9NSQ0 103 aa27.58■■■□□ 2.01
C2CD3-205ENST00000415191 MRC2Q9UBG0 1479 aa27.58■■■□□ 2.01
C2CD3-205ENST00000415191 TCOF1Q13428 1488 aaKnown RBP27.57■■■□□ 2
C2CD3-205ENST00000415191 CHIC2Q9UKJ5 165 aa27.56■■■□□ 2
C2CD3-205ENST00000415191 CDK13Q14004 1512 aaKnown RBP27.55■■■□□ 2
C2CD3-205ENST00000415191 ARID3CA6NKF2 412 aa27.53■■■□□ 2
C2CD3-205ENST00000415191 GCC2Q8IWJ2 1684 aa27.52■■■□□ 2
C2CD3-205ENST00000415191 WDR62O43379 1518 aa27.52■■■□□ 2
C2CD3-205ENST00000415191 ANP32CO43423 234 aa27.5■■□□□ 1.99
C2CD3-205ENST00000415191 KDM5BQ9UGL1 1544 aa27.47■■□□□ 1.99
C2CD3-205ENST00000415191 CCER2I3L3R5 266 aa27.46■■□□□ 1.99
C2CD3-205ENST00000415191 MIA2Q96PC5 1412 aa27.46■■□□□ 1.99
C2CD3-205ENST00000415191 TRIM52Q96A61 297 aa27.46■■□□□ 1.99
C2CD3-205ENST00000415191 ZNF608Q9ULD9 1512 aaPredicted RBP27.45■■□□□ 1.99
C2CD3-205ENST00000415191 AKNAQ7Z591 1439 aa27.45■■□□□ 1.98
C2CD3-205ENST00000415191 KDM6BO15054 1643 aa27.44■■□□□ 1.98
C2CD3-205ENST00000415191 IFT140Q96RY7 1462 aa27.42■■□□□ 1.98
C2CD3-205ENST00000415191 DENND4BO75064 1496 aaPredicted RBP27.41■■□□□ 1.98
C2CD3-205ENST00000415191 KIAA0586Q9BVV6 1533 aa27.36■■□□□ 1.97
C2CD3-205ENST00000415191 KIAA0556O60303 1618 aa27.36■■□□□ 1.97
C2CD3-205ENST00000415191 DISP1Q96F81 1524 aa27.35■■□□□ 1.97
C2CD3-205ENST00000415191 MPHOSPH9Q99550 1183 aa27.34■■□□□ 1.97
C2CD3-205ENST00000415191 NUP153P49790 1475 aaKnown RBP27.29■■□□□ 1.96
C2CD3-205ENST00000415191 DAPK1P53355 1430 aa27.29■■□□□ 1.96
C2CD3-205ENST00000415191 GRIN2AQ12879 1464 aa27.28■■□□□ 1.96
C2CD3-205ENST00000415191 FOXD1Q16676 465 aa27.27■■□□□ 1.96
C2CD3-205ENST00000415191 RAPGEF6Q8TEU7 1601 aa27.27■■□□□ 1.96
C2CD3-205ENST00000415191 HSPA5P11021 654 aaKnown RBP27.27■■□□□ 1.96
C2CD3-205ENST00000415191 FKBP8Q14318 412 aa27.26■■□□□ 1.95
C2CD3-205ENST00000415191 EIF4G3O43432 1585 aaKnown RBP27.26■■□□□ 1.95
C2CD3-205ENST00000415191 DNMT1P26358 1616 aaKnown RBP27.25■■□□□ 1.95
C2CD3-205ENST00000415191 ROCK1Q13464 1354 aa27.25■■□□□ 1.95
C2CD3-205ENST00000415191 ZNF644Q9H582 1327 aaPredicted RBP27.24■■□□□ 1.95
C2CD3-205ENST00000415191 BCANQ96GW7 911 aa27.24■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms