RNA–Protein interactions for RNA: ENST00000413971.5

TOP2B-202, Transcript of DNA topoisomerase II beta, humanhuman

TSL 5

Gene TOP2B, Length 2,049 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2B-202ENST00000413971 CEP164Q9UPV0 1460 aa7.79□□□□□ -1.16
TOP2B-202ENST00000413971 PAXIP1Q6ZW49 1069 aaPredicted RBP7.79□□□□□ -1.16
TOP2B-202ENST00000413971 ATF5Q9Y2D1 282 aaPredicted RBP7.78□□□□□ -1.16
TOP2B-202ENST00000413971 ILDR2Q71H61 639 aa7.78□□□□□ -1.16
TOP2B-202ENST00000413971 CFAP44Q96MT7 982 aa7.78□□□□□ -1.16
TOP2B-202ENST00000413971 RNF39Q9H2S5 420 aa7.78□□□□□ -1.16
TOP2B-202ENST00000413971 FBXO3Q9UK99 471 aa7.78□□□□□ -1.16
TOP2B-202ENST00000413971 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.77□□□□□ -1.172e-7■■■■□ 20.3
TOP2B-202ENST00000413971 ERCC6L2Q5T890 1561 aa7.76□□□□□ -1.17
TOP2B-202ENST00000413971 SMARCA4P51532 1647 aa7.75□□□□□ -1.17
TOP2B-202ENST00000413971 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.75□□□□□ -1.17
TOP2B-202ENST00000413971 VASPP50552 380 aaPredicted RBP7.74□□□□□ -1.17
TOP2B-202ENST00000413971 IFNLR1Q8IU57 520 aaPredicted RBP7.74□□□□□ -1.17
TOP2B-202ENST00000413971 ZNF608Q9ULD9 1512 aaPredicted RBP7.74□□□□□ -1.17
TOP2B-202ENST00000413971 NPM1P06748 294 aaKnown RBP eCLIP7.73□□□□□ -1.17
TOP2B-202ENST00000413971 TMEM132AQ24JP5 1023 aa7.73□□□□□ -1.17
TOP2B-202ENST00000413971 FANCD2Q9BXW9 1451 aa7.73□□□□□ -1.17
TOP2B-202ENST00000413971 BBXQ8WY36 941 aaPredicted RBP7.73□□□□□ -1.17
TOP2B-202ENST00000413971 CACNB1Q02641 598 aaPredicted RBP7.72□□□□□ -1.17
TOP2B-202ENST00000413971 TSHZ2Q9NRE2 1034 aa7.71□□□□□ -1.17
TOP2B-202ENST00000413971 URB2Q14146 1524 aaKnown RBP7.71□□□□□ -1.17
TOP2B-202ENST00000413971 PEG3Q9GZU2 1588 aa7.7□□□□□ -1.18
TOP2B-202ENST00000413971 HECW2Q9P2P5 1572 aa7.7□□□□□ -1.18
TOP2B-202ENST00000413971 ERICH6Q7L0X2 663 aa7.69□□□□□ -1.18
TOP2B-202ENST00000413971 CHD1O14646 1710 aa7.69□□□□□ -1.18
TOP2B-202ENST00000413971 IFT140Q96RY7 1462 aa7.68□□□□□ -1.18
TOP2B-202ENST00000413971 C1QBPQ07021 282 aaKnown RBP7.68□□□□□ -1.18
TOP2B-202ENST00000413971 NBR1Q14596 966 aa7.67□□□□□ -1.18
TOP2B-202ENST00000413971 C14orf37Q86TY3 774 aa7.67□□□□□ -1.18
TOP2B-202ENST00000413971 DISP3Q9P2K9 1392 aa7.66□□□□□ -1.18
TOP2B-202ENST00000413971 SYNJ2O15056 1496 aa7.63□□□□□ -1.19
TOP2B-202ENST00000413971 EIF4G3O43432 1585 aaKnown RBP7.62□□□□□ -1.19
TOP2B-202ENST00000413971 GAPVD1Q14C86 1478 aa7.62□□□□□ -1.19
TOP2B-202ENST00000413971 CLASP1Q7Z460 1538 aa7.62□□□□□ -1.19
TOP2B-202ENST00000413971 SPDYE4A6NLX3 237 aa7.61□□□□□ -1.19
TOP2B-202ENST00000413971 U3KPZ7 1027 aaPredicted RBP7.61□□□□□ -1.19
TOP2B-202ENST00000413971 SPRYD3Q8NCJ5 442 aa7.6□□□□□ -1.19
TOP2B-202ENST00000413971 PODXL2Q9NZ53 605 aa7.6□□□□□ -1.19
TOP2B-202ENST00000413971 AQRO60306 1485 aaKnown RBP eCLIP7.59□□□□□ -1.194e-7■■■■□ 20.9
TOP2B-202ENST00000413971 KIF13AQ9H1H9 1805 aa7.59□□□□□ -1.19
TOP2B-202ENST00000413971 CFTRP13569 1480 aa7.59□□□□□ -1.19
TOP2B-202ENST00000413971 RANGAP1P46060 587 aaPredicted RBP7.57□□□□□ -1.2
TOP2B-202ENST00000413971 ADGRL1O94910 1474 aa7.57□□□□□ -1.2
TOP2B-202ENST00000413971 ECM2O94769 699 aaPredicted RBP7.57□□□□□ -1.2
TOP2B-202ENST00000413971 PROM2Q8N271 834 aa7.56□□□□□ -1.2
TOP2B-202ENST00000413971 KDM6BO15054 1643 aa7.55□□□□□ -1.2
TOP2B-202ENST00000413971 SYNJ1O43426 1573 aa7.54□□□□□ -1.2
TOP2B-202ENST00000413971 FAM69CQ0P6D2 419 aa7.54□□□□□ -1.2
TOP2B-202ENST00000413971 MROH2BQ7Z745 1585 aa7.54□□□□□ -1.2
TOP2B-202ENST00000413971 SUPT5HO00267 1087 aaKnown RBP7.53□□□□□ -1.2
TOP2B-202ENST00000413971 RGL2O15211 777 aa7.52□□□□□ -1.2
TOP2B-202ENST00000413971 CHMP7Q8WUX9 453 aaPredicted RBP7.52□□□□□ -1.2
TOP2B-202ENST00000413971 TOPBP1Q92547 1522 aa7.5□□□□□ -1.21
TOP2B-202ENST00000413971 ABCC10Q5T3U5 1492 aa7.49□□□□□ -1.21
TOP2B-202ENST00000413971 TARBP1Q13395 1621 aaKnown RBP7.47□□□□□ -1.21
TOP2B-202ENST00000413971 SNAPC4Q5SXM2 1469 aa7.47□□□□□ -1.21
TOP2B-202ENST00000413971 SPATA31D1Q6ZQQ2 1576 aa7.46□□□□□ -1.21
TOP2B-202ENST00000413971 SPINK5Q9NQ38 1064 aaPredicted RBP7.45□□□□□ -1.22
TOP2B-202ENST00000413971 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.44□□□□□ -1.22
TOP2B-202ENST00000413971 CAPN15O75808 1086 aa7.44□□□□□ -1.22
TOP2B-202ENST00000413971 MKRN4PQ13434 485 aaPredicted RBP7.44□□□□□ -1.22
TOP2B-202ENST00000413971 HNRNPUL2Q1KMD3 747 aaKnown RBP7.44□□□□□ -1.22
TOP2B-202ENST00000413971 ABCC8Q09428 1581 aa7.44□□□□□ -1.22
TOP2B-202ENST00000413971 TDRD9Q8NDG6 1382 aaKnown RBP7.44□□□□□ -1.22
TOP2B-202ENST00000413971 CHGAP10645 457 aaKnown RBP7.44□□□□□ -1.22
TOP2B-202ENST00000413971 ZNF219Q9P2Y4 722 aaPredicted RBP7.44□□□□□ -1.22
TOP2B-202ENST00000413971 SAMD1Q6SPF0 538 aaPredicted RBP7.43□□□□□ -1.22
TOP2B-202ENST00000413971 SPOCK2Q92563 424 aa7.43□□□□□ -1.22
TOP2B-202ENST00000413971 DIP2BQ9P265 1576 aa7.42□□□□□ -1.22
TOP2B-202ENST00000413971 MAGI1Q96QZ7 1491 aaPredicted RBP7.42□□□□□ -1.22
TOP2B-202ENST00000413971 KLHL34Q8N239 644 aa7.42□□□□□ -1.22
TOP2B-202ENST00000413971 CERKQ8TCT0 537 aa7.42□□□□□ -1.22
TOP2B-202ENST00000413971 APLP2Q06481 763 aa7.4□□□□□ -1.22
TOP2B-202ENST00000413971 UBTFP17480 764 aaKnown RBP7.4□□□□□ -1.23
TOP2B-202ENST00000413971 DNMBPQ6XZF7 1577 aa7.39□□□□□ -1.23
TOP2B-202ENST00000413971 MAPKBP1O60336 1514 aa7.39□□□□□ -1.23
TOP2B-202ENST00000413971 TSPOAP1O95153 1857 aa7.38□□□□□ -1.23
TOP2B-202ENST00000413971 POLA1P09884 1462 aaPredicted RBP7.38□□□□□ -1.23
TOP2B-202ENST00000413971 TRIM26Q12899 539 aaPredicted RBP7.38□□□□□ -1.23
TOP2B-202ENST00000413971 RAD54L2Q9Y4B4 1467 aa7.37□□□□□ -1.23
TOP2B-202ENST00000413971 WIZO95785 1651 aa7.37□□□□□ -1.23
TOP2B-202ENST00000413971 PRDM2Q13029 1718 aa7.36□□□□□ -1.23
TOP2B-202ENST00000413971 NPM2Q86SE8 214 aaKnown RBP7.36□□□□□ -1.23
TOP2B-202ENST00000413971 CEP170Q5SW79 1584 aa7.36□□□□□ -1.23
TOP2B-202ENST00000413971 TOP2BQ02880 1626 aa7.36□□□□□ -1.23
TOP2B-202ENST00000413971 GRIN2BQ13224 1484 aa7.35□□□□□ -1.23
TOP2B-202ENST00000413971 SOGA1O94964 1423 aa7.35□□□□□ -1.23
TOP2B-202ENST00000413971 DSG3P32926 999 aa7.35□□□□□ -1.23
TOP2B-202ENST00000413971 WDR97A6NE52 1622 aa7.34□□□□□ -1.24
TOP2B-202ENST00000413971 BRPF1P55201 1214 aaPredicted RBP7.32□□□□□ -1.24
TOP2B-202ENST00000413971 COL17A1Q9UMD9 1497 aaPredicted RBP7.32□□□□□ -1.24
TOP2B-202ENST00000413971 HRCP23327 699 aa7.3□□□□□ -1.24
TOP2B-202ENST00000413971 SHROOM2Q13796 1616 aa7.29□□□□□ -1.24
TOP2B-202ENST00000413971 ABCB7O75027 752 aa7.29□□□□□ -1.24
TOP2B-202ENST00000413971 PCF11O94913 1555 aaKnown RBP7.27□□□□□ -1.25
TOP2B-202ENST00000413971 NUP160Q12769 1436 aa7.27□□□□□ -1.25
TOP2B-202ENST00000413971 HS6ST3Q8IZP7 471 aa7.27□□□□□ -1.25
TOP2B-202ENST00000413971 PRG4Q92954 1404 aaPredicted RBP7.26□□□□□ -1.25
TOP2B-202ENST00000413971 PPRC1Q5VV67 1664 aaKnown RBP7.26□□□□□ -1.25
TOP2B-202ENST00000413971 GRIN2AQ12879 1464 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms