RNA–Protein interactions for RNA: ENST00000413971.5

TOP2B-202, Transcript of DNA topoisomerase II beta, humanhuman

TSL 5

Gene TOP2B, Length 2,049 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2B-202ENST00000413971 AEBP2Q6ZN18 517 aaPredicted RBP12.38□□□□□ -0.43
TOP2B-202ENST00000413971 CHIC1Q5VXU3 224 aa11.91□□□□□ -0.5
TOP2B-202ENST00000413971 SENP3Q9H4L4 574 aaPredicted RBP10.53□□□□□ -0.72
TOP2B-202ENST00000413971 PHF23Q9BUL5 403 aaPredicted RBP10.46□□□□□ -0.74
TOP2B-202ENST00000413971 EHMT2Q96KQ7 1210 aa9.95□□□□□ -0.82
TOP2B-202ENST00000413971 DNAJC5BQ9UF47 199 aa9.89□□□□□ -0.83
TOP2B-202ENST00000413971 FOXD1Q16676 465 aa9.8□□□□□ -0.84
TOP2B-202ENST00000413971 ABCC9O60706 1549 aa9.79□□□□□ -0.84
TOP2B-202ENST00000413971 NISCHQ9Y2I1 1504 aa9.77□□□□□ -0.85
TOP2B-202ENST00000413971 PLPPR3Q6T4P5 718 aa9.75□□□□□ -0.85
TOP2B-202ENST00000413971 SLC24A1O60721 1099 aa9.61□□□□□ -0.87
TOP2B-202ENST00000413971 DNAJC5Q9H3Z4 198 aa9.61□□□□□ -0.87
TOP2B-202ENST00000413971 KCNA4P22459 653 aa9.54□□□□□ -0.88
TOP2B-202ENST00000413971 CSRNP3Q8WYN3 585 aa9.39□□□□□ -0.91
TOP2B-202ENST00000413971 PPP6R1Q9UPN7 881 aa9.3□□□□□ -0.92
TOP2B-202ENST00000413971 ADRA2BP18089 450 aa9.28□□□□□ -0.92
TOP2B-202ENST00000413971 POTEDQ86YR6 584 aa9.2□□□□□ -0.94
TOP2B-202ENST00000413971 PIAS4Q8N2W9 510 aaPredicted RBP9.2□□□□□ -0.94
TOP2B-202ENST00000413971 RTN4Q9NQC3 1192 aaKnown RBP9.18□□□□□ -0.94
TOP2B-202ENST00000413971 SLC4A1APQ9BWU0 796 aaKnown RBP9.16□□□□□ -0.94
TOP2B-202ENST00000413971 MSH5O43196 834 aa9.1□□□□□ -0.95
TOP2B-202ENST00000413971 CCDC180Q9P1Z9 1646 aa9.04□□□□□ -0.96
TOP2B-202ENST00000413971 PABPN1Q86U42 306 aaKnown RBP eCLIP9.04□□□□□ -0.96
TOP2B-202ENST00000413971 AMER1Q5JTC6 1135 aaPredicted RBP9.02□□□□□ -0.97
TOP2B-202ENST00000413971 RB1CC1Q8TDY2 1594 aa8.98□□□□□ -0.97
TOP2B-202ENST00000413971 CECR2Q9BXF3 1484 aa8.9□□□□□ -0.98
TOP2B-202ENST00000413971 TRIM41Q8WV44 630 aa8.86□□□□□ -0.99
TOP2B-202ENST00000413971 ZBTB22O15209 634 aa8.83□□□□□ -1
TOP2B-202ENST00000413971 CC2D2AQ9P2K1 1620 aa8.79□□□□□ -1
TOP2B-202ENST00000413971 BICRAQ9NZM4 1560 aa8.76□□□□□ -1.01
TOP2B-202ENST00000413971 NACADO15069 1562 aa8.75□□□□□ -1.01
TOP2B-202ENST00000413971 PPP4R3CPQ6ZMV5 832 aa8.75□□□□□ -1.01
TOP2B-202ENST00000413971 CUX2O14529 1486 aa8.74□□□□□ -1.01
TOP2B-202ENST00000413971 UNC13AQ9UPW8 1703 aa8.74□□□□□ -1.01
TOP2B-202ENST00000413971 NPM3O75607 178 aaKnown RBP8.65□□□□□ -1.02
TOP2B-202ENST00000413971 NCBP3Q53F19 620 aaKnown RBP8.64□□□□□ -1.03
TOP2B-202ENST00000413971 DCAF8L2P0C7V8 631 aa8.6□□□□□ -1.03
TOP2B-202ENST00000413971 EIF4G1Q04637 1599 aaKnown RBP8.59□□□□□ -1.03
TOP2B-202ENST00000413971 SHROOM4Q9ULL8 1493 aa8.56□□□□□ -1.04
TOP2B-202ENST00000413971 ERCC6Q03468 1493 aa8.5□□□□□ -1.05
TOP2B-202ENST00000413971 PRKCSHP14314 528 aaPredicted RBP8.49□□□□□ -1.05
TOP2B-202ENST00000413971 SCAF1Q9H7N4 1312 aaKnown RBP8.48□□□□□ -1.05
TOP2B-202ENST00000413971 MAPK8IP2Q13387 824 aaPredicted RBP8.48□□□□□ -1.05
TOP2B-202ENST00000413971 FOXD4L1Q9NU39 408 aa8.45□□□□□ -1.06
TOP2B-202ENST00000413971 FKBP8Q14318 412 aa8.44□□□□□ -1.06
TOP2B-202ENST00000413971 MYO15BQ96JP2 1530 aa8.4□□□□□ -1.06
TOP2B-202ENST00000413971 DMRT2Q9Y5R5 561 aa8.37□□□□□ -1.07
TOP2B-202ENST00000413971 ILDR1Q86SU0 546 aaPredicted RBP8.35□□□□□ -1.07
TOP2B-202ENST00000413971 PLCB2Q00722 1185 aa8.33□□□□□ -1.08
TOP2B-202ENST00000413971 TAOK2Q9UL54 1235 aa8.3□□□□□ -1.08
TOP2B-202ENST00000413971 BCANQ96GW7 911 aa8.28□□□□□ -1.08
TOP2B-202ENST00000413971 OSCARQ8IYS5 282 aa8.26□□□□□ -1.09
TOP2B-202ENST00000413971 CNKSR2Q8WXI2 1034 aa8.26□□□□□ -1.09
TOP2B-202ENST00000413971 TRHP20396 242 aaPredicted RBP8.25□□□□□ -1.09
TOP2B-202ENST00000413971 SCRIBQ14160 1630 aa8.25□□□□□ -1.09
TOP2B-202ENST00000413971 HAP1P54257 671 aaPredicted RBP8.25□□□□□ -1.09
TOP2B-202ENST00000413971 THOC2Q8NI27 1593 aaKnown RBP8.24□□□□□ -1.09
TOP2B-202ENST00000413971 NESP48681 1621 aa8.21□□□□□ -1.1
TOP2B-202ENST00000413971 DAXXQ9UER7 740 aaPredicted RBP8.2□□□□□ -1.1
TOP2B-202ENST00000413971 TPRNQ4KMQ1 711 aa8.19□□□□□ -1.1
TOP2B-202ENST00000413971 RIMBP3CA6NJZ7 1639 aa8.17□□□□□ -1.1
TOP2B-202ENST00000413971 RIMBP3BA6NNM3 1639 aa8.17□□□□□ -1.1
TOP2B-202ENST00000413971 RIMBP3Q9UFD9 1639 aa8.17□□□□□ -1.1
TOP2B-202ENST00000413971 BAZ1AQ9NRL2 1556 aaPredicted RBP8.17□□□□□ -1.1
TOP2B-202ENST00000413971 TIMELESSQ9UNS1 1208 aa8.13□□□□□ -1.11
TOP2B-202ENST00000413971 HOXD11P31277 338 aaPredicted RBP8.13□□□□□ -1.11
TOP2B-202ENST00000413971 NCAPD3P42695 1498 aa8.12□□□□□ -1.11
TOP2B-202ENST00000413971 CYB5RLQ6IPT4 315 aa8.12□□□□□ -1.11
TOP2B-202ENST00000413971 RNF216Q9NWF9 866 aaPredicted RBP8.12□□□□□ -1.11
TOP2B-202ENST00000413971 SMARCA2P51531 1590 aa8.11□□□□□ -1.11
TOP2B-202ENST00000413971 ARHGEF11O15085 1522 aa8.09□□□□□ -1.12
TOP2B-202ENST00000413971 DCAF8L1A6NGE4 600 aa8.05□□□□□ -1.12
TOP2B-202ENST00000413971 TULP1O00294 542 aaPredicted RBP8.05□□□□□ -1.12
TOP2B-202ENST00000413971 VSIG10Q8N0Z9 540 aa8.04□□□□□ -1.12
TOP2B-202ENST00000413971 KIF21AQ7Z4S6 1674 aa8.03□□□□□ -1.12
TOP2B-202ENST00000413971 DCAF1Q9Y4B6 1507 aa8.02□□□□□ -1.13
TOP2B-202ENST00000413971 PDS5BQ9NTI5 1447 aa8.02□□□□□ -1.13
TOP2B-202ENST00000413971 LAMC3Q9Y6N6 1575 aa8.02□□□□□ -1.13
TOP2B-202ENST00000413971 ARXQ96QS3 562 aa8.01□□□□□ -1.13
TOP2B-202ENST00000413971 SLC4A2P04920 1241 aa7.99□□□□□ -1.13
TOP2B-202ENST00000413971 ATXN8OSP0DMR3 200 aa7.99□□□□□ -1.13
TOP2B-202ENST00000413971 KDM2AQ9Y2K7 1162 aa7.99□□□□□ -1.13
TOP2B-202ENST00000413971 ATAD2BQ9ULI0 1458 aa7.98□□□□□ -1.13
TOP2B-202ENST00000413971 WDR62O43379 1518 aa7.98□□□□□ -1.13
TOP2B-202ENST00000413971 MRC2Q9UBG0 1479 aa7.97□□□□□ -1.13
TOP2B-202ENST00000413971 ARAP1Q96P48 1450 aa7.96□□□□□ -1.14
TOP2B-202ENST00000413971 HMGXB3Q12766 1538 aa7.95□□□□□ -1.14
TOP2B-202ENST00000413971 FBLN2P98095 1184 aa7.95□□□□□ -1.14
TOP2B-202ENST00000413971 ZCCHC6Q5VYS8 1495 aaKnown RBP7.92□□□□□ -1.14
TOP2B-202ENST00000413971 MYCNP04198 464 aaPredicted RBP7.9□□□□□ -1.14
TOP2B-202ENST00000413971 GTF3C3Q9Y5Q9 886 aa7.89□□□□□ -1.15
TOP2B-202ENST00000413971 LMTK3Q96Q04 1460 aa7.85□□□□□ -1.15
TOP2B-202ENST00000413971 KDM4FA0A1W2PPD8 638 aa7.85□□□□□ -1.15
TOP2B-202ENST00000413971 SOCS7O14512 581 aa7.85□□□□□ -1.15
TOP2B-202ENST00000413971 FBXO41Q8TF61 875 aa7.85□□□□□ -1.15
TOP2B-202ENST00000413971 BAZ1BQ9UIG0 1483 aaKnown RBP7.84□□□□□ -1.15
TOP2B-202ENST00000413971 CADPSQ9ULU8 1353 aa7.84□□□□□ -1.15
TOP2B-202ENST00000413971 HOMEZQ8IX15 550 aa7.82□□□□□ -1.16
TOP2B-202ENST00000413971 RSF1Q96T23 1441 aaPredicted RBP7.82□□□□□ -1.16
TOP2B-202ENST00000413971 PKD2Q13563 968 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms