RNA–Protein interactions for RNA: ENST00000413129.1

AL139039.3-201, humanhuman

TSL 1 (best) BASIC

Gene AL139039.3, Length 1,475 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL139039.3-201ENST00000413129 SPDYE4A6NLX3 237 aa12.91□□□□□ -0.34
AL139039.3-201ENST00000413129 MSH5O43196 834 aa12.91□□□□□ -0.34
AL139039.3-201ENST00000413129 NBR1Q14596 966 aa12.91□□□□□ -0.34
AL139039.3-201ENST00000413129 DMRT2Q9Y5R5 561 aa12.91□□□□□ -0.34
AL139039.3-201ENST00000413129 TMEM132AQ24JP5 1023 aa12.9□□□□□ -0.34
AL139039.3-201ENST00000413129 MROH2BQ7Z745 1585 aa12.9□□□□□ -0.34
AL139039.3-201ENST00000413129 FANCD2Q9BXW9 1451 aa12.87□□□□□ -0.35
AL139039.3-201ENST00000413129 ARHGEF11O15085 1522 aa12.85□□□□□ -0.35
AL139039.3-201ENST00000413129 PROM2Q8N271 834 aa12.84□□□□□ -0.35
AL139039.3-201ENST00000413129 SPRYD3Q8NCJ5 442 aa12.84□□□□□ -0.35
AL139039.3-201ENST00000413129 C14orf37Q86TY3 774 aa12.81□□□□□ -0.36
AL139039.3-201ENST00000413129 CFTRP13569 1480 aa12.81□□□□□ -0.36
AL139039.3-201ENST00000413129 ECM2O94769 699 aaPredicted RBP12.79□□□□□ -0.36
AL139039.3-201ENST00000413129 URB2Q14146 1524 aaKnown RBP12.77□□□□□ -0.37
AL139039.3-201ENST00000413129 TRHP20396 242 aaPredicted RBP12.77□□□□□ -0.37
AL139039.3-201ENST00000413129 CYB5RLQ6IPT4 315 aa12.75□□□□□ -0.37
AL139039.3-201ENST00000413129 SAMD1Q6SPF0 538 aaPredicted RBP12.75□□□□□ -0.37
AL139039.3-201ENST00000413129 IFT140Q96RY7 1462 aa12.73□□□□□ -0.37
AL139039.3-201ENST00000413129 WIZO95785 1651 aa12.72□□□□□ -0.37
AL139039.3-201ENST00000413129 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.71□□□□□ -0.38
AL139039.3-201ENST00000413129 HNRNPUL2Q1KMD3 747 aaKnown RBP12.71□□□□□ -0.38
AL139039.3-201ENST00000413129 RSF1Q96T23 1441 aaPredicted RBP12.68□□□□□ -0.38
AL139039.3-201ENST00000413129 ZNF219Q9P2Y4 722 aaPredicted RBP12.68□□□□□ -0.38
AL139039.3-201ENST00000413129 PRDM2Q13029 1718 aa12.68□□□□□ -0.38
AL139039.3-201ENST00000413129 ARAP1Q96P48 1450 aa12.67□□□□□ -0.38
AL139039.3-201ENST00000413129 ZNF608Q9ULD9 1512 aaPredicted RBP12.66□□□□□ -0.38
AL139039.3-201ENST00000413129 RGL2O15211 777 aa12.65□□□□□ -0.38
AL139039.3-201ENST00000413129 ABCC8Q09428 1581 aa12.63□□□□□ -0.39
AL139039.3-201ENST00000413129 SPOCK2Q92563 424 aa12.63□□□□□ -0.39
AL139039.3-201ENST00000413129 EIF4G3O43432 1585 aaKnown RBP12.62□□□□□ -0.39
AL139039.3-201ENST00000413129 CHD1O14646 1710 aa12.61□□□□□ -0.39
AL139039.3-201ENST00000413129 RANGAP1P46060 587 aaPredicted RBP12.61□□□□□ -0.39
AL139039.3-201ENST00000413129 MKRN4PQ13434 485 aaPredicted RBP12.59□□□□□ -0.39
AL139039.3-201ENST00000413129 KLHL34Q8N239 644 aa12.59□□□□□ -0.39
AL139039.3-201ENST00000413129 TOP2AP11388 1531 aaKnown RBP12.58□□□□□ -0.4
AL139039.3-201ENST00000413129 TOPBP1Q92547 1522 aa12.58□□□□□ -0.4
AL139039.3-201ENST00000413129 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.57□□□□□ -0.4
AL139039.3-201ENST00000413129 PODXL2Q9NZ53 605 aa12.57□□□□□ -0.4
AL139039.3-201ENST00000413129 CHGAP10645 457 aaKnown RBP12.53□□□□□ -0.4
AL139039.3-201ENST00000413129 U3KPZ7 1027 aaPredicted RBP12.53□□□□□ -0.4
AL139039.3-201ENST00000413129 DNMBPQ6XZF7 1577 aa12.52□□□□□ -0.41
AL139039.3-201ENST00000413129 TARBP1Q13395 1621 aaKnown RBP12.51□□□□□ -0.41
AL139039.3-201ENST00000413129 AQRO60306 1485 aaKnown RBP eCLIP12.49□□□□□ -0.41
AL139039.3-201ENST00000413129 SUPT5HO00267 1087 aaKnown RBP12.48□□□□□ -0.41
AL139039.3-201ENST00000413129 CLASP1Q7Z460 1538 aa12.48□□□□□ -0.41
AL139039.3-201ENST00000413129 WDR97A6NE52 1622 aa12.47□□□□□ -0.41
AL139039.3-201ENST00000413129 SYNJ1O43426 1573 aa12.46□□□□□ -0.41
AL139039.3-201ENST00000413129 POLA1P09884 1462 aaPredicted RBP12.41□□□□□ -0.42
AL139039.3-201ENST00000413129 CCDC88BA6NC98 1476 aa12.4□□□□□ -0.42
AL139039.3-201ENST00000413129 MAGI1Q96QZ7 1491 aaPredicted RBP12.4□□□□□ -0.42
AL139039.3-201ENST00000413129 CHMP7Q8WUX9 453 aaPredicted RBP12.39□□□□□ -0.43
AL139039.3-201ENST00000413129 SNAPC4Q5SXM2 1469 aa12.38□□□□□ -0.43
AL139039.3-201ENST00000413129 GAPVD1Q14C86 1478 aa12.37□□□□□ -0.43
AL139039.3-201ENST00000413129 DCAF8L1A6NGE4 600 aa12.36□□□□□ -0.43
AL139039.3-201ENST00000413129 SOGA1O94964 1423 aa12.36□□□□□ -0.43
AL139039.3-201ENST00000413129 SYNJ2O15056 1496 aa12.35□□□□□ -0.43
AL139039.3-201ENST00000413129 TDRD9Q8NDG6 1382 aaKnown RBP12.34□□□□□ -0.43
AL139039.3-201ENST00000413129 GRIN2BQ13224 1484 aa12.33□□□□□ -0.44
AL139039.3-201ENST00000413129 RAD54L2Q9Y4B4 1467 aa12.31□□□□□ -0.44
AL139039.3-201ENST00000413129 HS6ST3Q8IZP7 471 aa12.3□□□□□ -0.44
AL139039.3-201ENST00000413129 APLP2Q06481 763 aa12.26□□□□□ -0.45
AL139039.3-201ENST00000413129 CIZ1Q9ULV3 898 aaPredicted RBP12.26□□□□□ -0.45
AL139039.3-201ENST00000413129 FGD5Q6ZNL6 1462 aa12.25□□□□□ -0.45
AL139039.3-201ENST00000413129 PLCD3Q8N3E9 789 aa12.25□□□□□ -0.45
AL139039.3-201ENST00000413129 ILDR1Q86SU0 546 aaPredicted RBP12.24□□□□□ -0.45
AL139039.3-201ENST00000413129 KIF13AQ9H1H9 1805 aa12.24□□□□□ -0.45
AL139039.3-201ENST00000413129 PBRM1Q86U86 1689 aa12.23□□□□□ -0.45
AL139039.3-201ENST00000413129 UBTFP17480 764 aaKnown RBP12.23□□□□□ -0.45
AL139039.3-201ENST00000413129 BRPF1P55201 1214 aaPredicted RBP12.23□□□□□ -0.45
AL139039.3-201ENST00000413129 TRIM26Q12899 539 aaPredicted RBP12.2□□□□□ -0.46
AL139039.3-201ENST00000413129 NPM2Q86SE8 214 aaKnown RBP12.2□□□□□ -0.46
AL139039.3-201ENST00000413129 STAG3Q9UJ98 1225 aa12.17□□□□□ -0.46
AL139039.3-201ENST00000413129 CEP170Q5SW79 1584 aa12.17□□□□□ -0.46
AL139039.3-201ENST00000413129 NKX1-1Q15270 411 aaPredicted RBP12.16□□□□□ -0.46
AL139039.3-201ENST00000413129 GRIN2AQ12879 1464 aa12.16□□□□□ -0.46
AL139039.3-201ENST00000413129 CUX1P39880 1505 aa12.16□□□□□ -0.46
AL139039.3-201ENST00000413129 ERCC6L2Q5T890 1561 aa12.15□□□□□ -0.46
AL139039.3-201ENST00000413129 SHROOM2Q13796 1616 aa12.15□□□□□ -0.46
AL139039.3-201ENST00000413129 ABCA5Q8WWZ7 1642 aa12.15□□□□□ -0.46
AL139039.3-201ENST00000413129 GTPBP6O43824 516 aaPredicted RBP12.14□□□□□ -0.47
AL139039.3-201ENST00000413129 LMOD2Q6P5Q4 547 aa12.14□□□□□ -0.47
AL139039.3-201ENST00000413129 NUP160Q12769 1436 aa12.14□□□□□ -0.47
AL139039.3-201ENST00000413129 ABCA10Q8WWZ4 1543 aa12.14□□□□□ -0.47
AL139039.3-201ENST00000413129 ABCC10Q5T3U5 1492 aa12.13□□□□□ -0.47
AL139039.3-201ENST00000413129 KDM4FA0A1W2PPD8 638 aa12.13□□□□□ -0.47
AL139039.3-201ENST00000413129 MIER1Q8N108 512 aa12.12□□□□□ -0.47
AL139039.3-201ENST00000413129 KDM6BO15054 1643 aa12.11□□□□□ -0.47
AL139039.3-201ENST00000413129 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.1□□□□□ -0.47
AL139039.3-201ENST00000413129 MAPKBP1O60336 1514 aa12.1□□□□□ -0.47
AL139039.3-201ENST00000413129 FAM69CQ0P6D2 419 aa12.09□□□□□ -0.47
AL139039.3-201ENST00000413129 NEUROD2Q15784 382 aa12.08□□□□□ -0.47
AL139039.3-201ENST00000413129 ADAMTS12P58397 1594 aa12.08□□□□□ -0.48
AL139039.3-201ENST00000413129 P3H3Q8IVL6 736 aa12.08□□□□□ -0.48
AL139039.3-201ENST00000413129 DIP2BQ9P265 1576 aa12.07□□□□□ -0.48
AL139039.3-201ENST00000413129 HRCP23327 699 aa12.06□□□□□ -0.48
AL139039.3-201ENST00000413129 RNF25Q96BH1 459 aaPredicted RBP12.06□□□□□ -0.48
AL139039.3-201ENST00000413129 FHAD1B1AJZ9 1412 aa12.06□□□□□ -0.48
AL139039.3-201ENST00000413129 POLA2Q14181 598 aa12.05□□□□□ -0.48
AL139039.3-201ENST00000413129 PRG4Q92954 1404 aaPredicted RBP12.03□□□□□ -0.48
AL139039.3-201ENST00000413129 JPH4Q96JJ6 628 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms