RNA–Protein interactions for RNA: ENST00000412710.1

CUBNP1-201, Transcript of cubilin pseudogene 1, humanhuman

BASIC

Gene CUBNP1, Length 1,790 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUBNP1-201ENST00000412710 AQRO60306 1485 aaKnown RBP eCLIP13.11□□□□□ -0.31
CUBNP1-201ENST00000412710 FGD5Q6ZNL6 1462 aa13.1□□□□□ -0.31
CUBNP1-201ENST00000412710 EFCAB5A4FU69 1503 aa13.1□□□□□ -0.31
CUBNP1-201ENST00000412710 ADRA2BP18089 450 aa13.09□□□□□ -0.31
CUBNP1-201ENST00000412710 MAPKBP1O60336 1514 aa13.09□□□□□ -0.31
CUBNP1-201ENST00000412710 TIMELESSQ9UNS1 1208 aa13.08□□□□□ -0.32
CUBNP1-201ENST00000412710 CC2D2AQ9P2K1 1620 aa13.08□□□□□ -0.32
CUBNP1-201ENST00000412710 SETD5Q9C0A6 1442 aa13.07□□□□□ -0.32
CUBNP1-201ENST00000412710 RANGAP1P46060 587 aaPredicted RBP13.07□□□□□ -0.32
CUBNP1-201ENST00000412710 RAB3GAP2Q9H2M9 1393 aa13.06□□□□□ -0.32
CUBNP1-201ENST00000412710 YTHDC1Q96MU7 727 aaKnown RBP13.06□□□□□ -0.32
CUBNP1-201ENST00000412710 FYCO1Q9BQS8 1478 aa13.06□□□□□ -0.32
CUBNP1-201ENST00000412710 CUL7Q14999 1698 aa13.06□□□□□ -0.32
CUBNP1-201ENST00000412710 ABCA10Q8WWZ4 1543 aa13.06□□□□□ -0.32
CUBNP1-201ENST00000412710 DNMBPQ6XZF7 1577 aa13.05□□□□□ -0.32
CUBNP1-201ENST00000412710 CASKIN1Q8WXD9 1431 aa13.02□□□□□ -0.32
CUBNP1-201ENST00000412710 PCF11O94913 1555 aaKnown RBP13.02□□□□□ -0.33
CUBNP1-201ENST00000412710 FANCD2Q9BXW9 1451 aa13□□□□□ -0.33
CUBNP1-201ENST00000412710 PHLDB1Q86UU1 1377 aa13□□□□□ -0.33
CUBNP1-201ENST00000412710 FOXD1Q16676 465 aa13□□□□□ -0.33
CUBNP1-201ENST00000412710 PPP6R1Q9UPN7 881 aa12.99□□□□□ -0.33
CUBNP1-201ENST00000412710 CTTNBP2Q8WZ74 1663 aa12.99□□□□□ -0.33
CUBNP1-201ENST00000412710 THOC2Q8NI27 1593 aaKnown RBP12.96□□□□□ -0.33
CUBNP1-201ENST00000412710 TOPBP1Q92547 1522 aa12.96□□□□□ -0.33
CUBNP1-201ENST00000412710 WDR97A6NE52 1622 aa12.96□□□□□ -0.34
CUBNP1-201ENST00000412710 FMN1Q68DA7 1419 aa12.95□□□□□ -0.34
CUBNP1-201ENST00000412710 POLA1P09884 1462 aaPredicted RBP12.95□□□□□ -0.34
CUBNP1-201ENST00000412710 SAMD9Q5K651 1589 aa12.92□□□□□ -0.34
CUBNP1-201ENST00000412710 SNAPC4Q5SXM2 1469 aa12.92□□□□□ -0.34
CUBNP1-201ENST00000412710 KIF21AQ7Z4S6 1674 aa12.9□□□□□ -0.34
CUBNP1-201ENST00000412710 LAMC3Q9Y6N6 1575 aa12.9□□□□□ -0.34
CUBNP1-201ENST00000412710 SUPT16HQ9Y5B9 1047 aaKnown RBP12.9□□□□□ -0.34
CUBNP1-201ENST00000412710 FGD6Q6ZV73 1430 aa12.89□□□□□ -0.35
CUBNP1-201ENST00000412710 ABCA5Q8WWZ7 1642 aa12.89□□□□□ -0.35
CUBNP1-201ENST00000412710 HFM1A2PYH4 1435 aa12.88□□□□□ -0.35
CUBNP1-201ENST00000412710 FHOD3Q2V2M9 1422 aa12.88□□□□□ -0.35
CUBNP1-201ENST00000412710 RAD54L2Q9Y4B4 1467 aa12.87□□□□□ -0.35
CUBNP1-201ENST00000412710 CCER2I3L3R5 266 aa12.86□□□□□ -0.35
CUBNP1-201ENST00000412710 PPP1R15AO75807 674 aaPredicted RBP12.86□□□□□ -0.35
CUBNP1-201ENST00000412710 UACAQ9BZF9 1416 aa12.85□□□□□ -0.35
CUBNP1-201ENST00000412710 GRIN2BQ13224 1484 aa12.85□□□□□ -0.35
CUBNP1-201ENST00000412710 ITGAEP38570 1179 aa12.84□□□□□ -0.35
CUBNP1-201ENST00000412710 ARHGEF11O15085 1522 aa12.84□□□□□ -0.35
CUBNP1-201ENST00000412710 EHBP1L1Q8N3D4 1523 aa12.83□□□□□ -0.35
CUBNP1-201ENST00000412710 PTPN23Q9H3S7 1636 aa12.83□□□□□ -0.36
CUBNP1-201ENST00000412710 FAM50AQ14320 339 aaKnown RBP12.83□□□□□ -0.36
CUBNP1-201ENST00000412710 AKNAQ7Z591 1439 aa12.82□□□□□ -0.36
CUBNP1-201ENST00000412710 SUPT6HQ7KZ85 1726 aaKnown RBP12.82□□□□□ -0.36
CUBNP1-201ENST00000412710 CCDC18Q5T9S5 1454 aa12.82□□□□□ -0.36
CUBNP1-201ENST00000412710 MYOM3Q5VTT5 1437 aa12.82□□□□□ -0.36
CUBNP1-201ENST00000412710 URB2Q14146 1524 aaKnown RBP12.81□□□□□ -0.36
CUBNP1-201ENST00000412710 KCNA4P22459 653 aa12.81□□□□□ -0.36
CUBNP1-201ENST00000412710 TCOF1Q13428 1488 aaKnown RBP12.8□□□□□ -0.36
CUBNP1-201ENST00000412710 LRRIQ1Q96JM4 1722 aa12.8□□□□□ -0.36
CUBNP1-201ENST00000412710 UGGT2Q9NYU1 1516 aa12.79□□□□□ -0.36
CUBNP1-201ENST00000412710 NCOA2Q15596 1464 aa12.78□□□□□ -0.36
CUBNP1-201ENST00000412710 NAIPQ13075 1403 aa12.78□□□□□ -0.36
CUBNP1-201ENST00000412710 MTUS2Q5JR59 1369 aa12.78□□□□□ -0.36
CUBNP1-201ENST00000412710 SIN3AQ96ST3 1273 aa12.78□□□□□ -0.36
CUBNP1-201ENST00000412710 GAPVD1Q14C86 1478 aa12.78□□□□□ -0.36
CUBNP1-201ENST00000412710 GCC2Q8IWJ2 1684 aa12.77□□□□□ -0.37
CUBNP1-201ENST00000412710 PTPRKQ15262 1439 aa12.76□□□□□ -0.37
CUBNP1-201ENST00000412710 PDS5BQ9NTI5 1447 aa12.75□□□□□ -0.37
CUBNP1-201ENST00000412710 KDM5BQ9UGL1 1544 aa12.75□□□□□ -0.37
CUBNP1-201ENST00000412710 NESP48681 1621 aa12.75□□□□□ -0.37
CUBNP1-201ENST00000412710 HECW1Q76N89 1606 aa12.75□□□□□ -0.37
CUBNP1-201ENST00000412710 TONSLQ96HA7 1378 aa12.75□□□□□ -0.37
CUBNP1-201ENST00000412710 P3H3Q8IVL6 736 aa12.74□□□□□ -0.37
CUBNP1-201ENST00000412710 TARBP1Q13395 1621 aaKnown RBP12.73□□□□□ -0.37
CUBNP1-201ENST00000412710 DDX10Q13206 875 aaKnown RBP12.73□□□□□ -0.37
CUBNP1-201ENST00000412710 MIA2Q96PC5 1412 aa12.73□□□□□ -0.37
CUBNP1-201ENST00000412710 SLC24A1O60721 1099 aa12.72□□□□□ -0.37
CUBNP1-201ENST00000412710 ANP32CO43423 234 aa12.71□□□□□ -0.37
CUBNP1-201ENST00000412710 TSHZ2Q9NRE2 1034 aa12.71□□□□□ -0.37
CUBNP1-201ENST00000412710 KCNH8Q96L42 1107 aa12.69□□□□□ -0.38
CUBNP1-201ENST00000412710 ATP1B4Q9UN42 357 aaPredicted RBP12.68□□□□□ -0.38
CUBNP1-201ENST00000412710 MAGI3Q5TCQ9 1506 aa12.68□□□□□ -0.38
CUBNP1-201ENST00000412710 IQGAP2Q13576 1575 aa12.67□□□□□ -0.38
CUBNP1-201ENST00000412710 PBRM1Q86U86 1689 aa12.66□□□□□ -0.38
CUBNP1-201ENST00000412710 TDRD9Q8NDG6 1382 aaKnown RBP12.66□□□□□ -0.38
CUBNP1-201ENST00000412710 ADAMTS12P58397 1594 aa12.65□□□□□ -0.38
CUBNP1-201ENST00000412710 WDR62O43379 1518 aa12.65□□□□□ -0.38
CUBNP1-201ENST00000412710 EPRSP07814 1512 aaKnown RBP12.65□□□□□ -0.38
CUBNP1-201ENST00000412710 ROCK1Q13464 1354 aa12.64□□□□□ -0.39
CUBNP1-201ENST00000412710 DENND4BO75064 1496 aaPredicted RBP12.64□□□□□ -0.39
CUBNP1-201ENST00000412710 NEFLP07196 543 aa12.63□□□□□ -0.39
CUBNP1-201ENST00000412710 ERICH6BQ5W0A0 696 aa12.6□□□□□ -0.39
CUBNP1-201ENST00000412710 FKBP8Q14318 412 aa12.59□□□□□ -0.39
CUBNP1-201ENST00000412710 DNMT1P26358 1616 aaKnown RBP12.58□□□□□ -0.4
CUBNP1-201ENST00000412710 POLR1AO95602 1720 aaPredicted RBP12.57□□□□□ -0.4
CUBNP1-201ENST00000412710 CNTLNQ9NXG0 1405 aa12.56□□□□□ -0.4
CUBNP1-201ENST00000412710 RPRD2Q5VT52 1461 aaKnown RBP12.56□□□□□ -0.4
CUBNP1-201ENST00000412710 NCOA1Q15788 1441 aa12.56□□□□□ -0.4
CUBNP1-201ENST00000412710 ANP32EQ9BTT0 268 aa12.56□□□□□ -0.4
CUBNP1-201ENST00000412710 KDM6BO15054 1643 aa12.55□□□□□ -0.4
CUBNP1-201ENST00000412710 MRC2Q9UBG0 1479 aa12.55□□□□□ -0.4
CUBNP1-201ENST00000412710 KIAA0586Q9BVV6 1533 aa12.55□□□□□ -0.4
CUBNP1-201ENST00000412710 EIF4G2P78344 907 aaKnown RBP eCLIP12.54□□□□□ -0.4
CUBNP1-201ENST00000412710 DAPK1P53355 1430 aa12.54□□□□□ -0.4
CUBNP1-201ENST00000412710 ANKRD30BQ9BXX2 1392 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms