RNA–Protein interactions for RNA: ENST00000411973.3

TRAPPC12-203, Transcript of trafficking protein particle complex 12, humanhuman

TSL 5

Gene TRAPPC12, Length 838 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-203ENST00000411973 RIMBP3BA6NNM3 1639 aa25.66■■□□□ 1.7
TRAPPC12-203ENST00000411973 SHROOM2Q13796 1616 aa25.66■■□□□ 1.7
TRAPPC12-203ENST00000411973 RIMBP3Q9UFD9 1639 aa25.66■■□□□ 1.7
TRAPPC12-203ENST00000411973 FAM9AQ8IZU1 332 aaPredicted RBP25.66■■□□□ 1.7
TRAPPC12-203ENST00000411973 JPH4Q96JJ6 628 aa25.59■■□□□ 1.69
TRAPPC12-203ENST00000411973 KIF21BO75037 1637 aa25.57■■□□□ 1.68
TRAPPC12-203ENST00000411973 IQGAP2Q13576 1575 aa25.55■■□□□ 1.68
TRAPPC12-203ENST00000411973 CTTNBP2Q8WZ74 1663 aa25.54■■□□□ 1.68
TRAPPC12-203ENST00000411973 PRG4Q92954 1404 aaPredicted RBP25.51■■□□□ 1.67
TRAPPC12-203ENST00000411973 ERCC6L2Q5T890 1561 aa25.5■■□□□ 1.67
TRAPPC12-203ENST00000411973 ARAP1Q96P48 1450 aa25.48■■□□□ 1.67
TRAPPC12-203ENST00000411973 UGGT2Q9NYU1 1516 aa25.44■■□□□ 1.66
TRAPPC12-203ENST00000411973 GOLGA3Q08378 1498 aa25.41■■□□□ 1.66
TRAPPC12-203ENST00000411973 CYB5RLQ6IPT4 315 aa25.41■■□□□ 1.66
TRAPPC12-203ENST00000411973 CARMIL2Q6F5E8 1435 aa25.37■■□□□ 1.65
TRAPPC12-203ENST00000411973 DISP1Q96F81 1524 aa25.37■■□□□ 1.65
TRAPPC12-203ENST00000411973 KIAA0556O60303 1618 aa25.3■■□□□ 1.64
TRAPPC12-203ENST00000411973 UBTFP17480 764 aaKnown RBP25.3■■□□□ 1.64
TRAPPC12-203ENST00000411973 TNIKQ9UKE5 1360 aa25.28■■□□□ 1.64
TRAPPC12-203ENST00000411973 EHMT2Q96KQ7 1210 aa25.26■■□□□ 1.63
TRAPPC12-203ENST00000411973 PTPRGP23470 1445 aa25.24■■□□□ 1.63
TRAPPC12-203ENST00000411973 SAMD9Q5K651 1589 aa25.22■■□□□ 1.63
TRAPPC12-203ENST00000411973 EFCAB5A4FU69 1503 aa25.16■■□□□ 1.62
TRAPPC12-203ENST00000411973 RANGAP1P46060 587 aaPredicted RBP25.11■■□□□ 1.61
TRAPPC12-203ENST00000411973 ADCY10Q96PN6 1610 aa25.11■■□□□ 1.61
TRAPPC12-203ENST00000411973 TTBK1Q5TCY1 1321 aaPredicted RBP25.11■■□□□ 1.61
TRAPPC12-203ENST00000411973 P3H3Q8IVL6 736 aa25.09■■□□□ 1.61
TRAPPC12-203ENST00000411973 UACAQ9BZF9 1416 aa25.09■■□□□ 1.61
TRAPPC12-203ENST00000411973 UHRF1BP1LA0JNW5 1464 aa25.08■■□□□ 1.6
TRAPPC12-203ENST00000411973 FHOD3Q2V2M9 1422 aa25.04■■□□□ 1.6
TRAPPC12-203ENST00000411973 ARHGAP35Q9NRY4 1499 aa25.04■■□□□ 1.6
TRAPPC12-203ENST00000411973 ABCC2Q92887 1545 aa25.04■■□□□ 1.6
TRAPPC12-203ENST00000411973 ABCA8O94911 1581 aa25.03■■□□□ 1.6
TRAPPC12-203ENST00000411973 PLB1Q6P1J6 1458 aa25.02■■□□□ 1.6
TRAPPC12-203ENST00000411973 LOC105371045A0A1W2PR82 267 aa25.01■■□□□ 1.59
TRAPPC12-203ENST00000411973 NPM1P06748 294 aaKnown RBP eCLIP24.98■■□□□ 1.59
TRAPPC12-203ENST00000411973 KDM5BQ9UGL1 1544 aa24.96■■□□□ 1.59
TRAPPC12-203ENST00000411973 CLIP1P30622 1438 aa24.95■■□□□ 1.59
TRAPPC12-203ENST00000411973 MAPKBP1O60336 1514 aa24.93■■□□□ 1.58
TRAPPC12-203ENST00000411973 RAPGEF6Q8TEU7 1601 aa24.92■■□□□ 1.58
TRAPPC12-203ENST00000411973 FMN1Q68DA7 1419 aa24.91■■□□□ 1.58
TRAPPC12-203ENST00000411973 CEP162Q5TB80 1403 aa24.89■■□□□ 1.58
TRAPPC12-203ENST00000411973 ZCCHC11Q5TAX3 1644 aaKnown RBP24.89■■□□□ 1.57
TRAPPC12-203ENST00000411973 NUP153P49790 1475 aaKnown RBP24.83■■□□□ 1.57
TRAPPC12-203ENST00000411973 ATP10BO94823 1461 aa24.81■■□□□ 1.56
TRAPPC12-203ENST00000411973 ASXL2Q76L83 1435 aa24.8■■□□□ 1.56
TRAPPC12-203ENST00000411973 TRHP20396 242 aaPredicted RBP24.78■■□□□ 1.56
TRAPPC12-203ENST00000411973 ABCC10Q5T3U5 1492 aa24.77■■□□□ 1.56
TRAPPC12-203ENST00000411973 HECW1Q76N89 1606 aa24.75■■□□□ 1.55
TRAPPC12-203ENST00000411973 KIF13AQ9H1H9 1805 aa24.75■■□□□ 1.55
TRAPPC12-203ENST00000411973 CASKIN1Q8WXD9 1431 aa24.74■■□□□ 1.55
TRAPPC12-203ENST00000411973 DIP2BQ9P265 1576 aa24.74■■□□□ 1.55
TRAPPC12-203ENST00000411973 ARID3CA6NKF2 412 aa24.73■■□□□ 1.55
TRAPPC12-203ENST00000411973 WDR7Q9Y4E6 1490 aa24.72■■□□□ 1.55
TRAPPC12-203ENST00000411973 PCF11O94913 1555 aaKnown RBP24.71■■□□□ 1.55
TRAPPC12-203ENST00000411973 FYCO1Q9BQS8 1478 aa24.7■■□□□ 1.54
TRAPPC12-203ENST00000411973 EPRSP07814 1512 aaKnown RBP24.69■■□□□ 1.54
TRAPPC12-203ENST00000411973 FAM69CQ0P6D2 419 aa24.67■■□□□ 1.54
TRAPPC12-203ENST00000411973 GLI2P10070 1586 aa24.67■■□□□ 1.54
TRAPPC12-203ENST00000411973 CDK13Q14004 1512 aaKnown RBP24.66■■□□□ 1.54
TRAPPC12-203ENST00000411973 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.66■■□□□ 1.54
TRAPPC12-203ENST00000411973 HNRNPUL2Q1KMD3 747 aaKnown RBP24.66■■□□□ 1.54
TRAPPC12-203ENST00000411973 ATP1B4Q9UN42 357 aaPredicted RBP24.66■■□□□ 1.54
TRAPPC12-203ENST00000411973 LRRIQ1Q96JM4 1722 aa24.66■■□□□ 1.54
TRAPPC12-203ENST00000411973 CCDC18Q5T9S5 1454 aa24.62■■□□□ 1.53
TRAPPC12-203ENST00000411973 PLEKHD1A6NEE1 506 aa24.61■■□□□ 1.53
TRAPPC12-203ENST00000411973 VPS8Q8N3P4 1428 aa24.6■■□□□ 1.53
TRAPPC12-203ENST00000411973 KCNH8Q96L42 1107 aa24.58■■□□□ 1.53
TRAPPC12-203ENST00000411973 CDK11AQ9UQ88 783 aaPredicted RBP24.57■■□□□ 1.52
TRAPPC12-203ENST00000411973 MAP3K4Q9Y6R4 1608 aa24.55■■□□□ 1.52
TRAPPC12-203ENST00000411973 CFAP43Q8NDM7 1665 aa24.53■■□□□ 1.52
TRAPPC12-203ENST00000411973 ABCA9Q8IUA7 1624 aa24.51■■□□□ 1.51
TRAPPC12-203ENST00000411973 TSPOAP1O95153 1857 aa24.51■■□□□ 1.51
TRAPPC12-203ENST00000411973 TROQ12816 1431 aaPredicted RBP24.49■■□□□ 1.51
TRAPPC12-203ENST00000411973 PPRC1Q5VV67 1664 aaKnown RBP24.48■■□□□ 1.51
TRAPPC12-203ENST00000411973 CD109Q6YHK3 1445 aa24.46■■□□□ 1.51
TRAPPC12-203ENST00000411973 MAGI3Q5TCQ9 1506 aa24.45■■□□□ 1.5
TRAPPC12-203ENST00000411973 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.44■■□□□ 1.5
TRAPPC12-203ENST00000411973 TEX14Q8IWB6 1497 aa24.41■■□□□ 1.5
TRAPPC12-203ENST00000411973 KIF14Q15058 1648 aa24.41■■□□□ 1.5
TRAPPC12-203ENST00000411973 TIAM1Q13009 1591 aa24.4■■□□□ 1.5
TRAPPC12-203ENST00000411973 MAP3K1Q13233 1512 aa24.4■■□□□ 1.5
TRAPPC12-203ENST00000411973 TTC37Q6PGP7 1564 aa24.39■■□□□ 1.5
TRAPPC12-203ENST00000411973 MTUS2Q5JR59 1369 aa24.35■■□□□ 1.49
TRAPPC12-203ENST00000411973 EHBP1L1Q8N3D4 1523 aa24.34■■□□□ 1.49
TRAPPC12-203ENST00000411973 PLCH2O75038 1416 aa24.31■■□□□ 1.48
TRAPPC12-203ENST00000411973 MYO5CQ9NQX4 1742 aa24.31■■□□□ 1.48
TRAPPC12-203ENST00000411973 ARAP3Q8WWN8 1544 aa24.3■■□□□ 1.48
TRAPPC12-203ENST00000411973 LRRC9Q6ZRR7 1453 aa24.29■■□□□ 1.48
TRAPPC12-203ENST00000411973 PHLDB1Q86UU1 1377 aa24.29■■□□□ 1.48
TRAPPC12-203ENST00000411973 NEO1Q92859 1461 aa24.28■■□□□ 1.48
TRAPPC12-203ENST00000411973 APLP2Q06481 763 aa24.27■■□□□ 1.48
TRAPPC12-203ENST00000411973 KDM6BO15054 1643 aa24.26■■□□□ 1.47
TRAPPC12-203ENST00000411973 FANCAO15360 1455 aa24.25■■□□□ 1.47
TRAPPC12-203ENST00000411973 CFAP74Q9C0B2 1584 aa24.25■■□□□ 1.47
TRAPPC12-203ENST00000411973 CDC42BPAQ5VT25 1732 aa24.24■■□□□ 1.47
TRAPPC12-203ENST00000411973 KANK4Q5T7N3 995 aaPredicted RBP24.23■■□□□ 1.47
TRAPPC12-203ENST00000411973 PREX2Q70Z35 1606 aa24.23■■□□□ 1.47
TRAPPC12-203ENST00000411973 SUPT6HQ7KZ85 1726 aaKnown RBP24.23■■□□□ 1.47
TRAPPC12-203ENST00000411973 CDC42BPBQ9Y5S2 1711 aa24.23■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 120 ms