RNA–Protein interactions for RNA: ENST00000410055.5

PDK1-203, Transcript of pyruvate dehydrogenase kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDK1, Length 2,990 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDK1-203ENST00000410055 TSHZ2Q9NRE2 1034 aa24.15■■□□□ 1.46
PDK1-203ENST00000410055 RAD54L2Q9Y4B4 1467 aa24.14■■□□□ 1.46
PDK1-203ENST00000410055 NESP48681 1621 aa24.13■■□□□ 1.45
PDK1-203ENST00000410055 RRBP1Q9P2E9 1410 aaKnown RBP24.11■■□□□ 1.45
PDK1-203ENST00000410055 PRDM2Q13029 1718 aa24.05■■□□□ 1.44
PDK1-203ENST00000410055 CLSPNQ9HAW4 1339 aa24.04■■□□□ 1.44
PDK1-203ENST00000410055 FHOD3Q2V2M9 1422 aa24.02■■□□□ 1.44
PDK1-203ENST00000410055 RAB3GAP2Q9H2M9 1393 aa24.02■■□□□ 1.44
PDK1-203ENST00000410055 DNAJC5BQ9UF47 199 aa24.01■■□□□ 1.43
PDK1-203ENST00000410055 PHLDB1Q86UU1 1377 aa23.99■■□□□ 1.43
PDK1-203ENST00000410055 SUPT16HQ9Y5B9 1047 aaKnown RBP23.97■■□□□ 1.43
PDK1-203ENST00000410055 SIN3AQ96ST3 1273 aa23.96■■□□□ 1.43
PDK1-203ENST00000410055 TIAM1Q13009 1591 aa23.96■■□□□ 1.43
PDK1-203ENST00000410055 TDRD9Q8NDG6 1382 aaKnown RBP23.95■■□□□ 1.42
PDK1-203ENST00000410055 POLA1P09884 1462 aaPredicted RBP23.95■■□□□ 1.42
PDK1-203ENST00000410055 LRRC9Q6ZRR7 1453 aa23.94■■□□□ 1.42
PDK1-203ENST00000410055 TOPBP1Q92547 1522 aa23.93■■□□□ 1.42
PDK1-203ENST00000410055 FHAD1B1AJZ9 1412 aa23.92■■□□□ 1.42
PDK1-203ENST00000410055 ANO8Q9HCE9 1232 aaPredicted RBP23.88■■□□□ 1.41
PDK1-203ENST00000410055 SETD5Q9C0A6 1442 aa23.86■■□□□ 1.41
PDK1-203ENST00000410055 DNMBPQ6XZF7 1577 aa23.86■■□□□ 1.41
PDK1-203ENST00000410055 PCF11O94913 1555 aaKnown RBP23.85■■□□□ 1.41
PDK1-203ENST00000410055 HIRIP3Q9BW71 556 aaPredicted RBP23.85■■□□□ 1.41
PDK1-203ENST00000410055 ABCA10Q8WWZ4 1543 aa23.82■■□□□ 1.4
PDK1-203ENST00000410055 ARID3CA6NKF2 412 aa23.81■■□□□ 1.4
PDK1-203ENST00000410055 MTUS2Q5JR59 1369 aa23.76■■□□□ 1.39
PDK1-203ENST00000410055 URB2Q14146 1524 aaKnown RBP23.76■■□□□ 1.39
PDK1-203ENST00000410055 MAP3K1Q13233 1512 aa23.74■■□□□ 1.39
PDK1-203ENST00000410055 DDX10Q13206 875 aaKnown RBP23.74■■□□□ 1.39
PDK1-203ENST00000410055 KCNH8Q96L42 1107 aa23.73■■□□□ 1.39
PDK1-203ENST00000410055 MAPKBP1O60336 1514 aa23.73■■□□□ 1.39
PDK1-203ENST00000410055 CASKIN1Q8WXD9 1431 aa23.69■■□□□ 1.38
PDK1-203ENST00000410055 GAPVD1Q14C86 1478 aa23.67■■□□□ 1.38
PDK1-203ENST00000410055 FYCO1Q9BQS8 1478 aa23.67■■□□□ 1.38
PDK1-203ENST00000410055 FMN1Q68DA7 1419 aa23.66■■□□□ 1.38
PDK1-203ENST00000410055 CHIC2Q9UKJ5 165 aa23.65■■□□□ 1.38
PDK1-203ENST00000410055 BCANQ96GW7 911 aa23.64■■□□□ 1.38
PDK1-203ENST00000410055 PDS5BQ9NTI5 1447 aa23.63■■□□□ 1.37
PDK1-203ENST00000410055 CFAP43Q8NDM7 1665 aa23.63■■□□□ 1.37
PDK1-203ENST00000410055 CUL7Q14999 1698 aa23.62■■□□□ 1.37
PDK1-203ENST00000410055 EFCAB5A4FU69 1503 aa23.61■■□□□ 1.37
PDK1-203ENST00000410055 WDR97A6NE52 1622 aa23.61■■□□□ 1.37
PDK1-203ENST00000410055 LAMC3Q9Y6N6 1575 aa23.59■■□□□ 1.37
PDK1-203ENST00000410055 CTTNBP2Q8WZ74 1663 aa23.59■■□□□ 1.37
PDK1-203ENST00000410055 RRP7BPQ9NSQ0 103 aa23.59■■□□□ 1.37
PDK1-203ENST00000410055 FGD6Q6ZV73 1430 aa23.59■■□□□ 1.37
PDK1-203ENST00000410055 PPP1R15AO75807 674 aaPredicted RBP23.53■■□□□ 1.36
PDK1-203ENST00000410055 AQRO60306 1485 aaKnown RBP eCLIP23.53■■□□□ 1.364e-7■■■□□ 17.4
PDK1-203ENST00000410055 TONSLQ96HA7 1378 aa23.52■■□□□ 1.36
PDK1-203ENST00000410055 SNAPC4Q5SXM2 1469 aa23.52■■□□□ 1.36
PDK1-203ENST00000410055 TRIM52Q96A61 297 aa23.52■■□□□ 1.36
PDK1-203ENST00000410055 CCDC136Q96JN2 1154 aa23.52■■□□□ 1.36
PDK1-203ENST00000410055 PTPRKQ15262 1439 aa23.52■■□□□ 1.36
PDK1-203ENST00000410055 RBM19Q9Y4C8 960 aaKnown RBP23.49■■□□□ 1.35
PDK1-203ENST00000410055 NCOA2Q15596 1464 aa23.49■■□□□ 1.35
PDK1-203ENST00000410055 KIF21AQ7Z4S6 1674 aa23.48■■□□□ 1.35
PDK1-203ENST00000410055 SALL2Q9Y467 1007 aaPredicted RBP23.47■■□□□ 1.35
PDK1-203ENST00000410055 CCDC18Q5T9S5 1454 aa23.47■■□□□ 1.35
PDK1-203ENST00000410055 ABCA5Q8WWZ7 1642 aa23.46■■□□□ 1.35
PDK1-203ENST00000410055 MSH5O43196 834 aa23.43■■□□□ 1.34
PDK1-203ENST00000410055 MYOM3Q5VTT5 1437 aa23.42■■□□□ 1.34
PDK1-203ENST00000410055 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.4■■□□□ 1.34
PDK1-203ENST00000410055 TIMELESSQ9UNS1 1208 aa23.4■■□□□ 1.34
PDK1-203ENST00000410055 GRIN2BQ13224 1484 aa23.39■■□□□ 1.34
PDK1-203ENST00000410055 LRRIQ1Q96JM4 1722 aa23.38■■□□□ 1.33
PDK1-203ENST00000410055 FOXD1Q16676 465 aa23.37■■□□□ 1.33
PDK1-203ENST00000410055 ANP32CO43423 234 aa23.37■■□□□ 1.33
PDK1-203ENST00000410055 SAMD9Q5K651 1589 aa23.37■■□□□ 1.33
PDK1-203ENST00000410055 NAIPQ13075 1403 aa23.36■■□□□ 1.33
PDK1-203ENST00000410055 FBLN2P98095 1184 aa23.36■■□□□ 1.33
PDK1-203ENST00000410055 HFM1A2PYH4 1435 aa23.36■■□□□ 1.33
PDK1-203ENST00000410055 UACAQ9BZF9 1416 aa23.34■■□□□ 1.33
PDK1-203ENST00000410055 MAGI3Q5TCQ9 1506 aa23.32■■□□□ 1.32
PDK1-203ENST00000410055 CDK13Q14004 1512 aaKnown RBP23.32■■□□□ 1.32
PDK1-203ENST00000410055 DEKP35659 375 aaKnown RBP23.31■■□□□ 1.32
PDK1-203ENST00000410055 SUPT6HQ7KZ85 1726 aaKnown RBP23.31■■□□□ 1.32
PDK1-203ENST00000410055 TARBP1Q13395 1621 aaKnown RBP23.31■■□□□ 1.32
PDK1-203ENST00000410055 PTPN23Q9H3S7 1636 aa23.31■■□□□ 1.32
PDK1-203ENST00000410055 EHBP1L1Q8N3D4 1523 aa23.28■■□□□ 1.32
PDK1-203ENST00000410055 ZNF608Q9ULD9 1512 aaPredicted RBP23.27■■□□□ 1.32
PDK1-203ENST00000410055 ZNF644Q9H582 1327 aaPredicted RBP23.26■■□□□ 1.31
PDK1-203ENST00000410055 IQGAP2Q13576 1575 aa23.24■■□□□ 1.31
PDK1-203ENST00000410055 EPRSP07814 1512 aaKnown RBP23.24■■□□□ 1.31
PDK1-203ENST00000410055 FKBP8Q14318 412 aa23.23■■□□□ 1.31
PDK1-203ENST00000410055 ZNF777Q9ULD5 760 aaPredicted RBP23.22■■□□□ 1.31
PDK1-203ENST00000410055 UGGT2Q9NYU1 1516 aa23.22■■□□□ 1.31
PDK1-203ENST00000410055 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.22■■□□□ 1.31
PDK1-203ENST00000410055 MPHOSPH9Q99550 1183 aa23.21■■□□□ 1.31
PDK1-203ENST00000410055 PBRM1Q86U86 1689 aa23.21■■□□□ 1.31
PDK1-203ENST00000410055 MRC2Q9UBG0 1479 aa23.21■■□□□ 1.31
PDK1-203ENST00000410055 CHMP7Q8WUX9 453 aaPredicted RBP23.17■■□□□ 1.3
PDK1-203ENST00000410055 HSPA5P11021 654 aaKnown RBP23.17■■□□□ 1.3
PDK1-203ENST00000410055 HECW1Q76N89 1606 aa23.17■■□□□ 1.3
PDK1-203ENST00000410055 THOC2Q8NI27 1593 aaKnown RBP23.17■■□□□ 1.3
PDK1-203ENST00000410055 UBE2Q2Q8WVN8 375 aa23.16■■□□□ 1.3
PDK1-203ENST00000410055 CNGB1Q14028 1251 aaPredicted RBP23.16■■□□□ 1.3
PDK1-203ENST00000410055 L3MBTL2Q969R5 705 aa23.15■■□□□ 1.3
PDK1-203ENST00000410055 ADAMTS12P58397 1594 aa23.14■■□□□ 1.3
PDK1-203ENST00000410055 KDM6BO15054 1643 aa23.12■■□□□ 1.29
PDK1-203ENST00000410055 SLC4A1APQ9BWU0 796 aaKnown RBP23.12■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms