RNA–Protein interactions for RNA: ENST00000409857.7

GCFC2-202, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 5 BASIC

Gene GCFC2, Length 2,516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-202ENST00000409857 CTTNBP2Q8WZ74 1663 aa27.11■■□□□ 1.93
GCFC2-202ENST00000409857 GOLGA3Q08378 1498 aa27.09■■□□□ 1.93
GCFC2-202ENST00000409857 KIAA0586Q9BVV6 1533 aa27.08■■□□□ 1.93
GCFC2-202ENST00000409857 SHROOM2Q13796 1616 aa27.02■■□□□ 1.92
GCFC2-202ENST00000409857 IQGAP2Q13576 1575 aa27.01■■□□□ 1.91
GCFC2-202ENST00000409857 LOC105371045A0A1W2PR82 267 aa26.95■■□□□ 1.9
GCFC2-202ENST00000409857 UGGT2Q9NYU1 1516 aa26.89■■□□□ 1.9
GCFC2-202ENST00000409857 PPARGC1BQ86YN6 1023 aaKnown RBP26.89■■□□□ 1.89
GCFC2-202ENST00000409857 JPH4Q96JJ6 628 aa26.88■■□□□ 1.89
GCFC2-202ENST00000409857 UBTFP17480 764 aaKnown RBP26.87■■□□□ 1.89
GCFC2-202ENST00000409857 DNAJC5Q9H3Z4 198 aa26.86■■□□□ 1.89
GCFC2-202ENST00000409857 TNIKQ9UKE5 1360 aa26.82■■□□□ 1.88
GCFC2-202ENST00000409857 EHMT2Q96KQ7 1210 aa26.81■■□□□ 1.88
GCFC2-202ENST00000409857 ARHGEF11O15085 1522 aa26.81■■□□□ 1.88
GCFC2-202ENST00000409857 PRG4Q92954 1404 aaPredicted RBP26.81■■□□□ 1.88
GCFC2-202ENST00000409857 RIMBP3CA6NJZ7 1639 aa26.79■■□□□ 1.88
GCFC2-202ENST00000409857 RIMBP3BA6NNM3 1639 aa26.79■■□□□ 1.88
GCFC2-202ENST00000409857 RIMBP3Q9UFD9 1639 aa26.79■■□□□ 1.88
GCFC2-202ENST00000409857 SAMD9Q5K651 1589 aa26.76■■□□□ 1.87
GCFC2-202ENST00000409857 DISP1Q96F81 1524 aa26.76■■□□□ 1.87
GCFC2-202ENST00000409857 ERCC6L2Q5T890 1561 aa26.76■■□□□ 1.87
GCFC2-202ENST00000409857 CARMIL2Q6F5E8 1435 aa26.76■■□□□ 1.87
GCFC2-202ENST00000409857 KIAA0556O60303 1618 aa26.75■■□□□ 1.87
GCFC2-202ENST00000409857 EFCAB5A4FU69 1503 aa26.73■■□□□ 1.87
GCFC2-202ENST00000409857 ARAP1Q96P48 1450 aa26.62■■□□□ 1.85
GCFC2-202ENST00000409857 ARHGAP35Q9NRY4 1499 aa26.6■■□□□ 1.85
GCFC2-202ENST00000409857 CLIP1P30622 1438 aa26.57■■□□□ 1.84
GCFC2-202ENST00000409857 CEP162Q5TB80 1403 aa26.57■■□□□ 1.84
GCFC2-202ENST00000409857 RANGAP1P46060 587 aaPredicted RBP26.56■■□□□ 1.84
GCFC2-202ENST00000409857 PTPRGP23470 1445 aa26.55■■□□□ 1.84
GCFC2-202ENST00000409857 FHOD3Q2V2M9 1422 aa26.51■■□□□ 1.83
GCFC2-202ENST00000409857 P3H3Q8IVL6 736 aa26.49■■□□□ 1.83
GCFC2-202ENST00000409857 TRIM26Q12899 539 aaPredicted RBP26.47■■□□□ 1.83
GCFC2-202ENST00000409857 CYB5RLQ6IPT4 315 aa26.44■■□□□ 1.82
GCFC2-202ENST00000409857 ABCA8O94911 1581 aa26.44■■□□□ 1.82
GCFC2-202ENST00000409857 FMN1Q68DA7 1419 aa26.43■■□□□ 1.82
GCFC2-202ENST00000409857 UHRF1BP1LA0JNW5 1464 aa26.42■■□□□ 1.82
GCFC2-202ENST00000409857 UACAQ9BZF9 1416 aa26.41■■□□□ 1.82
GCFC2-202ENST00000409857 ADCY10Q96PN6 1610 aa26.39■■□□□ 1.82
GCFC2-202ENST00000409857 ABCC2Q92887 1545 aa26.39■■□□□ 1.82
GCFC2-202ENST00000409857 RAPGEF6Q8TEU7 1601 aa26.39■■□□□ 1.81
GCFC2-202ENST00000409857 PLB1Q6P1J6 1458 aa26.37■■□□□ 1.81
GCFC2-202ENST00000409857 TTBK1Q5TCY1 1321 aaPredicted RBP26.36■■□□□ 1.81
GCFC2-202ENST00000409857 HECW1Q76N89 1606 aa26.28■■□□□ 1.8
GCFC2-202ENST00000409857 CASKIN1Q8WXD9 1431 aa26.28■■□□□ 1.8
GCFC2-202ENST00000409857 PCF11O94913 1555 aaKnown RBP26.28■■□□□ 1.8
GCFC2-202ENST00000409857 KDM5BQ9UGL1 1544 aa26.27■■□□□ 1.8
GCFC2-202ENST00000409857 FYCO1Q9BQS8 1478 aa26.26■■□□□ 1.79
GCFC2-202ENST00000409857 NUP153P49790 1475 aaKnown RBP26.25■■□□□ 1.79
GCFC2-202ENST00000409857 VPS8Q8N3P4 1428 aa26.25■■□□□ 1.79
GCFC2-202ENST00000409857 ZCCHC11Q5TAX3 1644 aaKnown RBP26.23■■□□□ 1.79
GCFC2-202ENST00000409857 LRRIQ1Q96JM4 1722 aa26.19■■□□□ 1.78
GCFC2-202ENST00000409857 NPM1P06748 294 aaKnown RBP eCLIP26.17■■□□□ 1.78
GCFC2-202ENST00000409857 ATP10BO94823 1461 aa26.17■■□□□ 1.78
GCFC2-202ENST00000409857 MAPKBP1O60336 1514 aa26.17■■□□□ 1.78
GCFC2-202ENST00000409857 EPRSP07814 1512 aaKnown RBP26.16■■□□□ 1.78
GCFC2-202ENST00000409857 CCDC18Q5T9S5 1454 aa26.15■■□□□ 1.78
GCFC2-202ENST00000409857 CDK13Q14004 1512 aaKnown RBP26.09■■□□□ 1.77
GCFC2-202ENST00000409857 ATP1B4Q9UN42 357 aaPredicted RBP26.07■■□□□ 1.76
GCFC2-202ENST00000409857 CFAP43Q8NDM7 1665 aa26.06■■□□□ 1.76
GCFC2-202ENST00000409857 ASXL2Q76L83 1435 aa26.05■■□□□ 1.76
GCFC2-202ENST00000409857 MAP3K1Q13233 1512 aa26.04■■□□□ 1.76
GCFC2-202ENST00000409857 ARID3CA6NKF2 412 aa26.02■■□□□ 1.76
GCFC2-202ENST00000409857 WDR7Q9Y4E6 1490 aa26.02■■□□□ 1.76
GCFC2-202ENST00000409857 TIAM1Q13009 1591 aa26■■□□□ 1.75
GCFC2-202ENST00000409857 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.99■■□□□ 1.75
GCFC2-202ENST00000409857 HNRNPUL2Q1KMD3 747 aaKnown RBP25.99■■□□□ 1.75
GCFC2-202ENST00000409857 CDK11AQ9UQ88 783 aaPredicted RBP25.98■■□□□ 1.75
GCFC2-202ENST00000409857 PLEKHD1A6NEE1 506 aa25.95■■□□□ 1.74
GCFC2-202ENST00000409857 ZEB1P37275 1124 aaPredicted RBP25.94■■□□□ 1.74
GCFC2-202ENST00000409857 ABCC10Q5T3U5 1492 aa25.94■■□□□ 1.74
GCFC2-202ENST00000409857 DIP2BQ9P265 1576 aa25.94■■□□□ 1.74
GCFC2-202ENST00000409857 GLI2P10070 1586 aa25.92■■□□□ 1.74
GCFC2-202ENST00000409857 TROQ12816 1431 aaPredicted RBP25.92■■□□□ 1.74
GCFC2-202ENST00000409857 MAGI3Q5TCQ9 1506 aa25.92■■□□□ 1.74
GCFC2-202ENST00000409857 KIF13AQ9H1H9 1805 aa25.91■■□□□ 1.74
GCFC2-202ENST00000409857 EHBP1L1Q8N3D4 1523 aa25.89■■□□□ 1.74
GCFC2-202ENST00000409857 APLP2Q06481 763 aa25.88■■□□□ 1.73
GCFC2-202ENST00000409857 KIF14Q15058 1648 aa25.86■■□□□ 1.73
GCFC2-202ENST00000409857 LRRC9Q6ZRR7 1453 aa25.86■■□□□ 1.73
GCFC2-202ENST00000409857 ABCA9Q8IUA7 1624 aa25.85■■□□□ 1.73
GCFC2-202ENST00000409857 MTUS2Q5JR59 1369 aa25.84■■□□□ 1.73
GCFC2-202ENST00000409857 MAP3K4Q9Y6R4 1608 aa25.82■■□□□ 1.72
GCFC2-202ENST00000409857 KCNH8Q96L42 1107 aa25.8■■□□□ 1.72
GCFC2-202ENST00000409857 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.8■■□□□ 1.72
GCFC2-202ENST00000409857 SUPT6HQ7KZ85 1726 aaKnown RBP25.79■■□□□ 1.72
GCFC2-202ENST00000409857 FAM69CQ0P6D2 419 aa25.78■■□□□ 1.72
GCFC2-202ENST00000409857 TTC37Q6PGP7 1564 aa25.77■■□□□ 1.72
GCFC2-202ENST00000409857 KANK4Q5T7N3 995 aaPredicted RBP25.75■■□□□ 1.71
GCFC2-202ENST00000409857 MYO5CQ9NQX4 1742 aa25.73■■□□□ 1.71
GCFC2-202ENST00000409857 TRHP20396 242 aaPredicted RBP25.72■■□□□ 1.71
GCFC2-202ENST00000409857 CD109Q6YHK3 1445 aa25.7■■□□□ 1.7
GCFC2-202ENST00000409857 NCOA2Q15596 1464 aa25.7■■□□□ 1.7
GCFC2-202ENST00000409857 PPRC1Q5VV67 1664 aaKnown RBP25.69■■□□□ 1.7
GCFC2-202ENST00000409857 ARAP3Q8WWN8 1544 aa25.69■■□□□ 1.7
GCFC2-202ENST00000409857 CDC42BPAQ5VT25 1732 aa25.69■■□□□ 1.7
GCFC2-202ENST00000409857 PREX2Q70Z35 1606 aa25.67■■□□□ 1.7
GCFC2-202ENST00000409857 TSPOAP1O95153 1857 aa25.67■■□□□ 1.7
GCFC2-202ENST00000409857 ITSN2Q9NZM3 1697 aa25.66■■□□□ 1.7
GCFC2-202ENST00000409857 PLCH2O75038 1416 aa25.64■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms