RNA–Protein interactions for RNA: ENST00000409673.7

SCRN3-202, Transcript of secernin 3, humanhuman

TSL 2 BASIC

Gene SCRN3, Length 1,788 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN3-202ENST00000409673 RRBP1Q9P2E9 1410 aaKnown RBP15.51■□□□□ 0.07
SCRN3-202ENST00000409673 DNMBPQ6XZF7 1577 aa15.44■□□□□ 0.06
SCRN3-202ENST00000409673 RAD54L2Q9Y4B4 1467 aa15.42■□□□□ 0.06
SCRN3-202ENST00000409673 CUX1P39880 1505 aa15.42■□□□□ 0.06
SCRN3-202ENST00000409673 ZNF608Q9ULD9 1512 aaPredicted RBP15.42■□□□□ 0.06
SCRN3-202ENST00000409673 POLA1P09884 1462 aaPredicted RBP15.4■□□□□ 0.06
SCRN3-202ENST00000409673 IFT140Q96RY7 1462 aa15.39■□□□□ 0.05
SCRN3-202ENST00000409673 FGD5Q6ZNL6 1462 aa15.38■□□□□ 0.05
SCRN3-202ENST00000409673 KIF27Q86VH2 1401 aa15.37■□□□□ 0.05
SCRN3-202ENST00000409673 TDRD9Q8NDG6 1382 aaKnown RBP15.37■□□□□ 0.05
SCRN3-202ENST00000409673 KANK4Q5T7N3 995 aaPredicted RBP15.37■□□□□ 0.05
SCRN3-202ENST00000409673 DNAJC5Q9H3Z4 198 aa15.37■□□□□ 0.05
SCRN3-202ENST00000409673 AQRO60306 1485 aaKnown RBP eCLIP15.37■□□□□ 0.05
SCRN3-202ENST00000409673 SUPT16HQ9Y5B9 1047 aaKnown RBP15.36■□□□□ 0.05
SCRN3-202ENST00000409673 ARHGAP35Q9NRY4 1499 aa15.36■□□□□ 0.05
SCRN3-202ENST00000409673 CCNB3Q8WWL7 1395 aa15.36■□□□□ 0.05
SCRN3-202ENST00000409673 RANGAP1P46060 587 aaPredicted RBP15.36■□□□□ 0.05
SCRN3-202ENST00000409673 MAP3K1Q13233 1512 aa15.34■□□□□ 0.05
SCRN3-202ENST00000409673 MAPKBP1O60336 1514 aa15.31■□□□□ 0.04
SCRN3-202ENST00000409673 FBLN2P98095 1184 aa15.3■□□□□ 0.04
SCRN3-202ENST00000409673 TIAM1Q13009 1591 aa15.3■□□□□ 0.04
SCRN3-202ENST00000409673 TARBP1Q13395 1621 aaKnown RBP15.29■□□□□ 0.04
SCRN3-202ENST00000409673 POTEDQ86YR6 584 aa15.26■□□□□ 0.03
SCRN3-202ENST00000409673 EIF4G3O43432 1585 aaKnown RBP15.25■□□□□ 0.03
SCRN3-202ENST00000409673 RAB3GAP2Q9H2M9 1393 aa15.25■□□□□ 0.03
SCRN3-202ENST00000409673 OSCARQ8IYS5 282 aa15.24■□□□□ 0.03
SCRN3-202ENST00000409673 CFAP43Q8NDM7 1665 aa15.24■□□□□ 0.03
SCRN3-202ENST00000409673 BCL11AQ9H165 835 aa15.23■□□□□ 0.03
SCRN3-202ENST00000409673 ANP32EQ9BTT0 268 aa15.21■□□□□ 0.02
SCRN3-202ENST00000409673 LRRC9Q6ZRR7 1453 aa15.19■□□□□ 0.02
SCRN3-202ENST00000409673 TSHZ2Q9NRE2 1034 aa15.19■□□□□ 0.02
SCRN3-202ENST00000409673 SETD5Q9C0A6 1442 aa15.19■□□□□ 0.02
SCRN3-202ENST00000409673 GAPVD1Q14C86 1478 aa15.18■□□□□ 0.02
SCRN3-202ENST00000409673 CHMP7Q8WUX9 453 aaPredicted RBP15.17■□□□□ 0.02
SCRN3-202ENST00000409673 ABCA10Q8WWZ4 1543 aa15.17■□□□□ 0.02
SCRN3-202ENST00000409673 WDR97A6NE52 1622 aa15.16■□□□□ 0.02
SCRN3-202ENST00000409673 SNAPC4Q5SXM2 1469 aa15.16■□□□□ 0.02
SCRN3-202ENST00000409673 GRIN2BQ13224 1484 aa15.14■□□□□ 0.01
SCRN3-202ENST00000409673 IGF1RP08069 1367 aa15.13■□□□□ 0.01
SCRN3-202ENST00000409673 PCF11O94913 1555 aaKnown RBP15.13■□□□□ 0.01
SCRN3-202ENST00000409673 FHAD1B1AJZ9 1412 aa15.12■□□□□ 0.01
SCRN3-202ENST00000409673 PHLDB1Q86UU1 1377 aa15.11■□□□□ 0.01
SCRN3-202ENST00000409673 ITGAEP38570 1179 aa15.11■□□□□ 0.01
SCRN3-202ENST00000409673 TIMELESSQ9UNS1 1208 aa15.1■□□□□ 0.01
SCRN3-202ENST00000409673 ERICH6Q7L0X2 663 aa15.09■□□□□ 0.01
SCRN3-202ENST00000409673 KCNH8Q96L42 1107 aa15.08■□□□□ 0.01
SCRN3-202ENST00000409673 CARMIL1Q5VZK9 1371 aa15.07■□□□□ 0
SCRN3-202ENST00000409673 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.07■□□□□ 0
SCRN3-202ENST00000409673 ABCA5Q8WWZ7 1642 aa15.06■□□□□ 0
SCRN3-202ENST00000409673 EFCAB5A4FU69 1503 aa15.06■□□□□ 0
SCRN3-202ENST00000409673 MAGI1Q96QZ7 1491 aaPredicted RBP15.05■□□□□ -0
SCRN3-202ENST00000409673 FYCO1Q9BQS8 1478 aa15.05■□□□□ -0
SCRN3-202ENST00000409673 PPP1R15AO75807 674 aaPredicted RBP15.05■□□□□ -0
SCRN3-202ENST00000409673 CHD1O14646 1710 aa15.04■□□□□ -0
SCRN3-202ENST00000409673 SYNJ2O15056 1496 aa15.03■□□□□ -0
SCRN3-202ENST00000409673 CCER2I3L3R5 266 aa15.03■□□□□ -0
SCRN3-202ENST00000409673 PBRM1Q86U86 1689 aa15.03■□□□□ -0
SCRN3-202ENST00000409673 DDX10Q13206 875 aaKnown RBP15.01□□□□□ -0.01
SCRN3-202ENST00000409673 SIN3AQ96ST3 1273 aa15□□□□□ -0.01
SCRN3-202ENST00000409673 CASKIN1Q8WXD9 1431 aa14.99□□□□□ -0.01
SCRN3-202ENST00000409673 FKBP8Q14318 412 aa14.98□□□□□ -0.01
SCRN3-202ENST00000409673 CTTNBP2Q8WZ74 1663 aa14.98□□□□□ -0.01
SCRN3-202ENST00000409673 FAM50AQ14320 339 aaKnown RBP14.97□□□□□ -0.01
SCRN3-202ENST00000409673 CUL7Q14999 1698 aa14.97□□□□□ -0.01
SCRN3-202ENST00000409673 GRIN2AQ12879 1464 aa14.95□□□□□ -0.02
SCRN3-202ENST00000409673 FHOD3Q2V2M9 1422 aa14.94□□□□□ -0.02
SCRN3-202ENST00000409673 NEFLP07196 543 aa14.94□□□□□ -0.02
SCRN3-202ENST00000409673 BCANQ96GW7 911 aa14.94□□□□□ -0.02
SCRN3-202ENST00000409673 ADAMTS12P58397 1594 aa14.94□□□□□ -0.02
SCRN3-202ENST00000409673 CYB5RLQ6IPT4 315 aa14.93□□□□□ -0.02
SCRN3-202ENST00000409673 CCDC18Q5T9S5 1454 aa14.93□□□□□ -0.02
SCRN3-202ENST00000409673 FGD6Q6ZV73 1430 aa14.93□□□□□ -0.02
SCRN3-202ENST00000409673 PTPN23Q9H3S7 1636 aa14.93□□□□□ -0.02
SCRN3-202ENST00000409673 ANP32CO43423 234 aa14.93□□□□□ -0.02
SCRN3-202ENST00000409673 MYT1LQ9UL68 1186 aa14.93□□□□□ -0.02
SCRN3-202ENST00000409673 HFM1A2PYH4 1435 aa14.91□□□□□ -0.02
SCRN3-202ENST00000409673 UACAQ9BZF9 1416 aa14.91□□□□□ -0.02
SCRN3-202ENST00000409673 ARHGEF11O15085 1522 aa14.9□□□□□ -0.02
SCRN3-202ENST00000409673 TONSLQ96HA7 1378 aa14.89□□□□□ -0.03
SCRN3-202ENST00000409673 FMN1Q68DA7 1419 aa14.88□□□□□ -0.03
SCRN3-202ENST00000409673 KDM5BQ9UGL1 1544 aa14.88□□□□□ -0.03
SCRN3-202ENST00000409673 RIMBP3CA6NJZ7 1639 aa14.87□□□□□ -0.03
SCRN3-202ENST00000409673 RIMBP3BA6NNM3 1639 aa14.87□□□□□ -0.03
SCRN3-202ENST00000409673 RIMBP3Q9UFD9 1639 aa14.87□□□□□ -0.03
SCRN3-202ENST00000409673 CEP170Q5SW79 1584 aa14.87□□□□□ -0.03
SCRN3-202ENST00000409673 CLASP1Q7Z460 1538 aa14.86□□□□□ -0.03
SCRN3-202ENST00000409673 SAMD9Q5K651 1589 aa14.86□□□□□ -0.03
SCRN3-202ENST00000409673 NUP160Q12769 1436 aa14.86□□□□□ -0.03
SCRN3-202ENST00000409673 LRRIQ1Q96JM4 1722 aa14.86□□□□□ -0.03
SCRN3-202ENST00000409673 RBM19Q9Y4C8 960 aaKnown RBP14.85□□□□□ -0.03
SCRN3-202ENST00000409673 JPH4Q96JJ6 628 aa14.84□□□□□ -0.03
SCRN3-202ENST00000409673 PTPRKQ15262 1439 aa14.83□□□□□ -0.03
SCRN3-202ENST00000409673 TRIM52Q96A61 297 aa14.83□□□□□ -0.03
SCRN3-202ENST00000409673 NAIPQ13075 1403 aa14.83□□□□□ -0.04
SCRN3-202ENST00000409673 P3H3Q8IVL6 736 aa14.83□□□□□ -0.04
SCRN3-202ENST00000409673 SUPT6HQ7KZ85 1726 aaKnown RBP14.82□□□□□ -0.04
SCRN3-202ENST00000409673 GCC2Q8IWJ2 1684 aa14.82□□□□□ -0.04
SCRN3-202ENST00000409673 HECW1Q76N89 1606 aa14.82□□□□□ -0.04
SCRN3-202ENST00000409673 EHBP1L1Q8N3D4 1523 aa14.82□□□□□ -0.04
SCRN3-202ENST00000409673 PRKCSHP14314 528 aaPredicted RBP14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms