RNA–Protein interactions for RNA: ENST00000408005.2

THSD7A-201, Transcript of thrombospondin type 1 domain containing 7A, humanhuman

TSL 1 (best)

Gene THSD7A, Length 1,684 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THSD7A-201ENST00000408005 TOPBP1Q92547 1522 aa14.38□□□□□ -0.11
THSD7A-201ENST00000408005 TARBP1Q13395 1621 aaKnown RBP14.37□□□□□ -0.11
THSD7A-201ENST00000408005 ZBTB22O15209 634 aa14.36□□□□□ -0.11
THSD7A-201ENST00000408005 AQRO60306 1485 aaKnown RBP eCLIP14.33□□□□□ -0.12
THSD7A-201ENST00000408005 ZNF219Q9P2Y4 722 aaPredicted RBP14.31□□□□□ -0.12
THSD7A-201ENST00000408005 FBLN2P98095 1184 aa14.29□□□□□ -0.12
THSD7A-201ENST00000408005 DNMBPQ6XZF7 1577 aa14.28□□□□□ -0.12
THSD7A-201ENST00000408005 TOP2AP11388 1531 aaKnown RBP14.28□□□□□ -0.12
THSD7A-201ENST00000408005 APLP2Q06481 763 aa14.27□□□□□ -0.12
THSD7A-201ENST00000408005 KIF13AQ9H1H9 1805 aa14.27□□□□□ -0.13
THSD7A-201ENST00000408005 SYNJ1O43426 1573 aa14.27□□□□□ -0.13
THSD7A-201ENST00000408005 NPM3O75607 178 aaKnown RBP14.24□□□□□ -0.13
THSD7A-201ENST00000408005 ABCC8Q09428 1581 aa14.23□□□□□ -0.13
THSD7A-201ENST00000408005 GAPVD1Q14C86 1478 aa14.22□□□□□ -0.13
THSD7A-201ENST00000408005 SNAPC4Q5SXM2 1469 aa14.21□□□□□ -0.13
THSD7A-201ENST00000408005 HAX1O00165 279 aa14.19□□□□□ -0.14
THSD7A-201ENST00000408005 POLA1P09884 1462 aaPredicted RBP14.18□□□□□ -0.14
THSD7A-201ENST00000408005 PLSCR2Q9NRY7 297 aa14.14□□□□□ -0.15
THSD7A-201ENST00000408005 WDR97A6NE52 1622 aa14.14□□□□□ -0.15
THSD7A-201ENST00000408005 RAD54L2Q9Y4B4 1467 aa14.13□□□□□ -0.15
THSD7A-201ENST00000408005 MAGI1Q96QZ7 1491 aaPredicted RBP14.12□□□□□ -0.15
THSD7A-201ENST00000408005 ERCC6L2Q5T890 1561 aa14.12□□□□□ -0.15
THSD7A-201ENST00000408005 TDRD9Q8NDG6 1382 aaKnown RBP14.1□□□□□ -0.15
THSD7A-201ENST00000408005 KDM4FA0A1W2PPD8 638 aa14.1□□□□□ -0.15
THSD7A-201ENST00000408005 SYNJ2O15056 1496 aa14.08□□□□□ -0.16
THSD7A-201ENST00000408005 PBRM1Q86U86 1689 aa14.08□□□□□ -0.16
THSD7A-201ENST00000408005 CCDC88BA6NC98 1476 aa14.07□□□□□ -0.16
THSD7A-201ENST00000408005 CHMP7Q8WUX9 453 aaPredicted RBP14.06□□□□□ -0.16
THSD7A-201ENST00000408005 GRIN2BQ13224 1484 aa14.03□□□□□ -0.16
THSD7A-201ENST00000408005 SOGA1O94964 1423 aa14.02□□□□□ -0.16
THSD7A-201ENST00000408005 KDM6BO15054 1643 aa14□□□□□ -0.17
THSD7A-201ENST00000408005 CEP170Q5SW79 1584 aa13.99□□□□□ -0.17
THSD7A-201ENST00000408005 PIP4P2Q8N4L2 257 aa13.99□□□□□ -0.17
THSD7A-201ENST00000408005 FGD5Q6ZNL6 1462 aa13.98□□□□□ -0.17
THSD7A-201ENST00000408005 HECW2Q9P2P5 1572 aa13.97□□□□□ -0.17
THSD7A-201ENST00000408005 SHROOM2Q13796 1616 aa13.96□□□□□ -0.17
THSD7A-201ENST00000408005 DIP2BQ9P265 1576 aa13.96□□□□□ -0.18
THSD7A-201ENST00000408005 FOXD4L1Q9NU39 408 aa13.95□□□□□ -0.18
THSD7A-201ENST00000408005 TSPOAP1O95153 1857 aa13.93□□□□□ -0.18
THSD7A-201ENST00000408005 ABCC10Q5T3U5 1492 aa13.92□□□□□ -0.18
THSD7A-201ENST00000408005 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.91□□□□□ -0.18
THSD7A-201ENST00000408005 HNRNPUL2Q1KMD3 747 aaKnown RBP13.91□□□□□ -0.18
THSD7A-201ENST00000408005 ABCA5Q8WWZ7 1642 aa13.9□□□□□ -0.18
THSD7A-201ENST00000408005 MAPKBP1O60336 1514 aa13.88□□□□□ -0.19
THSD7A-201ENST00000408005 CUX1P39880 1505 aa13.88□□□□□ -0.19
THSD7A-201ENST00000408005 GRIN2AQ12879 1464 aa13.88□□□□□ -0.19
THSD7A-201ENST00000408005 LHX8Q68G74 356 aa13.88□□□□□ -0.19
THSD7A-201ENST00000408005 ADGRL1O94910 1474 aa13.87□□□□□ -0.19
THSD7A-201ENST00000408005 AKT1S1Q96B36 256 aa13.87□□□□□ -0.19
THSD7A-201ENST00000408005 NUP160Q12769 1436 aa13.86□□□□□ -0.19
THSD7A-201ENST00000408005 FAM69CQ0P6D2 419 aa13.85□□□□□ -0.19
THSD7A-201ENST00000408005 ADAMTS12P58397 1594 aa13.85□□□□□ -0.19
THSD7A-201ENST00000408005 ADCY10Q96PN6 1610 aa13.8□□□□□ -0.2
THSD7A-201ENST00000408005 FBXO41Q8TF61 875 aa13.79□□□□□ -0.2
THSD7A-201ENST00000408005 PPRC1Q5VV67 1664 aaKnown RBP13.77□□□□□ -0.2
THSD7A-201ENST00000408005 ABCA10Q8WWZ4 1543 aa13.77□□□□□ -0.2
THSD7A-201ENST00000408005 EVX2Q03828 476 aa13.77□□□□□ -0.21
THSD7A-201ENST00000408005 SAMD1Q6SPF0 538 aaPredicted RBP13.75□□□□□ -0.21
THSD7A-201ENST00000408005 FKBP8Q14318 412 aa13.74□□□□□ -0.21
THSD7A-201ENST00000408005 PRG4Q92954 1404 aaPredicted RBP13.74□□□□□ -0.21
THSD7A-201ENST00000408005 REM2Q8IYK8 340 aaPredicted RBP13.72□□□□□ -0.21
THSD7A-201ENST00000408005 POLA2Q14181 598 aa13.72□□□□□ -0.21
THSD7A-201ENST00000408005 SLC4A2P04920 1241 aa13.71□□□□□ -0.21
THSD7A-201ENST00000408005 LMTK3Q96Q04 1460 aa13.71□□□□□ -0.22
THSD7A-201ENST00000408005 FXR2P51116 673 aaKnown RBP eCLIP13.69□□□□□ -0.22
THSD7A-201ENST00000408005 RUSC2Q8N2Y8 1516 aa13.68□□□□□ -0.22
THSD7A-201ENST00000408005 FHAD1B1AJZ9 1412 aa13.66□□□□□ -0.22
THSD7A-201ENST00000408005 NPM1P06748 294 aaKnown RBP eCLIP13.65□□□□□ -0.22
THSD7A-201ENST00000408005 COL17A1Q9UMD9 1497 aaPredicted RBP13.61□□□□□ -0.23
THSD7A-201ENST00000408005 GLI2P10070 1586 aa13.6□□□□□ -0.23
THSD7A-201ENST00000408005 TOP2BQ02880 1626 aa13.6□□□□□ -0.23
THSD7A-201ENST00000408005 JPH4Q96JJ6 628 aa13.59□□□□□ -0.23
THSD7A-201ENST00000408005 ERICH3Q5RHP9 1530 aa13.59□□□□□ -0.23
THSD7A-201ENST00000408005 PITPNM1O00562 1244 aa13.56□□□□□ -0.24
THSD7A-201ENST00000408005 MAP3K4Q9Y6R4 1608 aa13.56□□□□□ -0.24
THSD7A-201ENST00000408005 SOCS7O14512 581 aa13.55□□□□□ -0.24
THSD7A-201ENST00000408005 ILDR2Q71H61 639 aa13.55□□□□□ -0.24
THSD7A-201ENST00000408005 CUL7Q14999 1698 aa13.55□□□□□ -0.24
THSD7A-201ENST00000408005 BIVM-ERCC5R4GMW8 1640 aa13.52□□□□□ -0.25
THSD7A-201ENST00000408005 WRNQ14191 1432 aaPredicted RBP eCLIP13.51□□□□□ -0.25
THSD7A-201ENST00000408005 PLCB2Q00722 1185 aa13.5□□□□□ -0.25
THSD7A-201ENST00000408005 ASXL2Q76L83 1435 aa13.5□□□□□ -0.25
THSD7A-201ENST00000408005 KIF21BO75037 1637 aa13.5□□□□□ -0.25
THSD7A-201ENST00000408005 ABCC2Q92887 1545 aa13.49□□□□□ -0.25
THSD7A-201ENST00000408005 PRKCSHP14314 528 aaPredicted RBP13.48□□□□□ -0.25
THSD7A-201ENST00000408005 PLB1Q6P1J6 1458 aa13.48□□□□□ -0.25
THSD7A-201ENST00000408005 GABBR2O75899 941 aa13.46□□□□□ -0.26
THSD7A-201ENST00000408005 TEX14Q8IWB6 1497 aa13.46□□□□□ -0.26
THSD7A-201ENST00000408005 DISP3Q9P2K9 1392 aa13.44□□□□□ -0.26
THSD7A-201ENST00000408005 BCANQ96GW7 911 aa13.44□□□□□ -0.26
THSD7A-201ENST00000408005 EPRSP07814 1512 aaKnown RBP13.43□□□□□ -0.26
THSD7A-201ENST00000408005 PCF11O94913 1555 aaKnown RBP13.41□□□□□ -0.26
THSD7A-201ENST00000408005 SPATA31D1Q6ZQQ2 1576 aa13.41□□□□□ -0.26
THSD7A-201ENST00000408005 ADAMTSL3P82987 1691 aa13.41□□□□□ -0.26
THSD7A-201ENST00000408005 KIAA0586Q9BVV6 1533 aa13.41□□□□□ -0.26
THSD7A-201ENST00000408005 PTPRMP28827 1452 aa13.38□□□□□ -0.27
THSD7A-201ENST00000408005 PTPRGP23470 1445 aa13.38□□□□□ -0.27
THSD7A-201ENST00000408005 ZCCHC11Q5TAX3 1644 aaKnown RBP13.38□□□□□ -0.27
THSD7A-201ENST00000408005 UHRF1BP1LA0JNW5 1464 aa13.37□□□□□ -0.27
THSD7A-201ENST00000408005 TAOK2Q9UL54 1235 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms