RNA–Protein interactions for RNA: ENST00000405315.8

NUCB1-201, Transcript of nucleobindin 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NUCB1, Length 2,668 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCB1-201ENST00000405315 RAB3GAP2Q9H2M9 1393 aa21.33■■□□□ 1.01
NUCB1-201ENST00000405315 FHAD1B1AJZ9 1412 aa21.32■■□□□ 1
NUCB1-201ENST00000405315 DNMBPQ6XZF7 1577 aa21.32■■□□□ 1
NUCB1-201ENST00000405315 MAPKBP1O60336 1514 aa21.29■■□□□ 1
NUCB1-201ENST00000405315 PHLDB1Q86UU1 1377 aa21.28■■□□□ 1
NUCB1-201ENST00000405315 RAD54L2Q9Y4B4 1467 aa21.27■■□□□ 1
NUCB1-201ENST00000405315 ABCA10Q8WWZ4 1543 aa21.26■□□□□ 0.99
NUCB1-201ENST00000405315 TOPBP1Q92547 1522 aa21.25■□□□□ 0.99
NUCB1-201ENST00000405315 SETD5Q9C0A6 1442 aa21.25■□□□□ 0.99
NUCB1-201ENST00000405315 POLA1P09884 1462 aaPredicted RBP21.24■□□□□ 0.99
NUCB1-201ENST00000405315 P3H3Q8IVL6 736 aa21.24■□□□□ 0.99
NUCB1-201ENST00000405315 CUL7Q14999 1698 aa21.23■□□□□ 0.99
NUCB1-201ENST00000405315 CTTNBP2Q8WZ74 1663 aa21.23■□□□□ 0.99
NUCB1-201ENST00000405315 FHOD3Q2V2M9 1422 aa21.23■□□□□ 0.99
NUCB1-201ENST00000405315 EFCAB5A4FU69 1503 aa21.22■□□□□ 0.99
NUCB1-201ENST00000405315 FYCO1Q9BQS8 1478 aa21.21■□□□□ 0.99
NUCB1-201ENST00000405315 FAM50AQ14320 339 aaKnown RBP21.2■□□□□ 0.98
NUCB1-201ENST00000405315 NESP48681 1621 aa21.19■□□□□ 0.98
NUCB1-201ENST00000405315 ATP1B4Q9UN42 357 aaPredicted RBP21.18■□□□□ 0.98
NUCB1-201ENST00000405315 CASKIN1Q8WXD9 1431 aa21.15■□□□□ 0.98
NUCB1-201ENST00000405315 AQRO60306 1485 aaKnown RBP eCLIP21.14■□□□□ 0.971e-6■■■■■ 26.9
NUCB1-201ENST00000405315 WDR97A6NE52 1622 aa21.14■□□□□ 0.97
NUCB1-201ENST00000405315 URB2Q14146 1524 aaKnown RBP21.06■□□□□ 0.96
NUCB1-201ENST00000405315 FMN1Q68DA7 1419 aa21.06■□□□□ 0.96
NUCB1-201ENST00000405315 LAMC3Q9Y6N6 1575 aa21.06■□□□□ 0.96
NUCB1-201ENST00000405315 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.05■□□□□ 0.962e-6■■□□□ 13.2
NUCB1-201ENST00000405315 SIN3AQ96ST3 1273 aa21.05■□□□□ 0.96
NUCB1-201ENST00000405315 SNAPC4Q5SXM2 1469 aa21.05■□□□□ 0.96
NUCB1-201ENST00000405315 ABCA5Q8WWZ7 1642 aa21.04■□□□□ 0.96
NUCB1-201ENST00000405315 SAMD9Q5K651 1589 aa21.01■□□□□ 0.95
NUCB1-201ENST00000405315 FGD6Q6ZV73 1430 aa21.01■□□□□ 0.95
NUCB1-201ENST00000405315 LRRIQ1Q96JM4 1722 aa21■□□□□ 0.95
NUCB1-201ENST00000405315 MTUS2Q5JR59 1369 aa20.97■□□□□ 0.95
NUCB1-201ENST00000405315 TDRD9Q8NDG6 1382 aaKnown RBP20.96■□□□□ 0.95
NUCB1-201ENST00000405315 GAPVD1Q14C86 1478 aa20.96■□□□□ 0.95
NUCB1-201ENST00000405315 TIMELESSQ9UNS1 1208 aa20.95■□□□□ 0.94
NUCB1-201ENST00000405315 CCDC18Q5T9S5 1454 aa20.93■□□□□ 0.94
NUCB1-201ENST00000405315 SUPT16HQ9Y5B9 1047 aaKnown RBP20.93■□□□□ 0.94
NUCB1-201ENST00000405315 THOC2Q8NI27 1593 aaKnown RBP20.92■□□□□ 0.94
NUCB1-201ENST00000405315 GRIN2BQ13224 1484 aa20.92■□□□□ 0.94
NUCB1-201ENST00000405315 KCNH8Q96L42 1107 aa20.91■□□□□ 0.94
NUCB1-201ENST00000405315 SUPT6HQ7KZ85 1726 aaKnown RBP20.9■□□□□ 0.94
NUCB1-201ENST00000405315 PTPN23Q9H3S7 1636 aa20.9■□□□□ 0.94
NUCB1-201ENST00000405315 KIF21AQ7Z4S6 1674 aa20.9■□□□□ 0.94
NUCB1-201ENST00000405315 DDX10Q13206 875 aaKnown RBP20.9■□□□□ 0.94
NUCB1-201ENST00000405315 NCOA2Q15596 1464 aa20.89■□□□□ 0.94
NUCB1-201ENST00000405315 HFM1A2PYH4 1435 aa20.88■□□□□ 0.93
NUCB1-201ENST00000405315 PDS5BQ9NTI5 1447 aa20.88■□□□□ 0.93
NUCB1-201ENST00000405315 EHBP1L1Q8N3D4 1523 aa20.88■□□□□ 0.93
NUCB1-201ENST00000405315 PTPRKQ15262 1439 aa20.88■□□□□ 0.93
NUCB1-201ENST00000405315 MYOM3Q5VTT5 1437 aa20.87■□□□□ 0.93
NUCB1-201ENST00000405315 PPP1R15AO75807 674 aaPredicted RBP20.87■□□□□ 0.93
NUCB1-201ENST00000405315 UACAQ9BZF9 1416 aa20.85■□□□□ 0.93
NUCB1-201ENST00000405315 TONSLQ96HA7 1378 aa20.83■□□□□ 0.93
NUCB1-201ENST00000405315 TARBP1Q13395 1621 aaKnown RBP20.83■□□□□ 0.92
NUCB1-201ENST00000405315 MYT1Q01538 1121 aa20.81■□□□□ 0.92
NUCB1-201ENST00000405315 NAIPQ13075 1403 aa20.81■□□□□ 0.92
NUCB1-201ENST00000405315 UGGT2Q9NYU1 1516 aa20.81■□□□□ 0.92
NUCB1-201ENST00000405315 HIRIP3Q9BW71 556 aaPredicted RBP20.81■□□□□ 0.92
NUCB1-201ENST00000405315 PBRM1Q86U86 1689 aa20.8■□□□□ 0.92
NUCB1-201ENST00000405315 MAGI3Q5TCQ9 1506 aa20.79■□□□□ 0.92
NUCB1-201ENST00000405315 ARHGEF11O15085 1522 aa20.77■□□□□ 0.92
NUCB1-201ENST00000405315 HECW1Q76N89 1606 aa20.76■□□□□ 0.91
NUCB1-201ENST00000405315 GCC2Q8IWJ2 1684 aa20.73■□□□□ 0.91
NUCB1-201ENST00000405315 IQGAP2Q13576 1575 aa20.73■□□□□ 0.91
NUCB1-201ENST00000405315 DNAJC5BQ9UF47 199 aa20.72■□□□□ 0.91
NUCB1-201ENST00000405315 ADAMTS12P58397 1594 aa20.71■□□□□ 0.91
NUCB1-201ENST00000405315 TCOF1Q13428 1488 aaKnown RBP20.7■□□□□ 0.9
NUCB1-201ENST00000405315 ANP32CO43423 234 aa20.7■□□□□ 0.9
NUCB1-201ENST00000405315 CCER2I3L3R5 266 aa20.69■□□□□ 0.9
NUCB1-201ENST00000405315 KDM5BQ9UGL1 1544 aa20.68■□□□□ 0.9
NUCB1-201ENST00000405315 EPRSP07814 1512 aaKnown RBP20.67■□□□□ 0.9
NUCB1-201ENST00000405315 CDK13Q14004 1512 aaKnown RBP20.65■□□□□ 0.9
NUCB1-201ENST00000405315 RRP7BPQ9NSQ0 103 aa20.65■□□□□ 0.9
NUCB1-201ENST00000405315 WDR62O43379 1518 aa20.64■□□□□ 0.9
NUCB1-201ENST00000405315 CHIC2Q9UKJ5 165 aa20.63■□□□□ 0.89
NUCB1-201ENST00000405315 AKNAQ7Z591 1439 aa20.62■□□□□ 0.89
NUCB1-201ENST00000405315 KDM6BO15054 1643 aa20.62■□□□□ 0.89
NUCB1-201ENST00000405315 DENND4BO75064 1496 aaPredicted RBP20.6■□□□□ 0.89
NUCB1-201ENST00000405315 MRC2Q9UBG0 1479 aa20.59■□□□□ 0.89
NUCB1-201ENST00000405315 MIA2Q96PC5 1412 aa20.59■□□□□ 0.89
NUCB1-201ENST00000405315 FKBP8Q14318 412 aa20.57■□□□□ 0.88
NUCB1-201ENST00000405315 TRIM52Q96A61 297 aa20.57■□□□□ 0.88
NUCB1-201ENST00000405315 BCANQ96GW7 911 aa20.57■□□□□ 0.88
NUCB1-201ENST00000405315 TSHZ2Q9NRE2 1034 aa20.57■□□□□ 0.88
NUCB1-201ENST00000405315 ARID3CA6NKF2 412 aa20.55■□□□□ 0.88
NUCB1-201ENST00000405315 KIAA0556O60303 1618 aa20.51■□□□□ 0.87
NUCB1-201ENST00000405315 NEFLP07196 543 aa20.5■□□□□ 0.87
NUCB1-201ENST00000405315 HSPA5P11021 654 aaKnown RBP20.49■□□□□ 0.87
NUCB1-201ENST00000405315 MPHOSPH9Q99550 1183 aa20.49■□□□□ 0.87
NUCB1-201ENST00000405315 ZNF608Q9ULD9 1512 aaPredicted RBP20.48■□□□□ 0.87
NUCB1-201ENST00000405315 DNMT1P26358 1616 aaKnown RBP20.48■□□□□ 0.87
NUCB1-201ENST00000405315 DAPK1P53355 1430 aa20.47■□□□□ 0.87
NUCB1-201ENST00000405315 IFT140Q96RY7 1462 aa20.47■□□□□ 0.87
NUCB1-201ENST00000405315 DISP1Q96F81 1524 aa20.46■□□□□ 0.87
NUCB1-201ENST00000405315 WASHC2AQ641Q2 1341 aa20.46■□□□□ 0.87
NUCB1-201ENST00000405315 KIAA0586Q9BVV6 1533 aa20.45■□□□□ 0.86
NUCB1-201ENST00000405315 RAPGEF6Q8TEU7 1601 aa20.45■□□□□ 0.86
NUCB1-201ENST00000405315 ROCK1Q13464 1354 aa20.44■□□□□ 0.86
NUCB1-201ENST00000405315 NUP153P49790 1475 aaKnown RBP20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms