RNA–Protein interactions for RNA: ENST00000405097.5

RDX-202, Transcript of radixin, humanhuman

TSL 1 (best) BASIC

Gene RDX, Length 2,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDX-202ENST00000405097 MAP3K1Q13233 1512 aa29.91■■■□□ 2.38
RDX-202ENST00000405097 LRRC9Q6ZRR7 1453 aa29.89■■■□□ 2.37
RDX-202ENST00000405097 ATP1B4Q9UN42 357 aaPredicted RBP29.88■■■□□ 2.37
RDX-202ENST00000405097 FHAD1B1AJZ9 1412 aa29.87■■■□□ 2.37
RDX-202ENST00000405097 FHOD3Q2V2M9 1422 aa29.85■■■□□ 2.37
RDX-202ENST00000405097 PCF11O94913 1555 aaKnown RBP29.84■■■□□ 2.37
RDX-202ENST00000405097 YTHDC1Q96MU7 727 aaKnown RBP29.84■■■□□ 2.37
RDX-202ENST00000405097 PHLDB1Q86UU1 1377 aa29.82■■■□□ 2.36
RDX-202ENST00000405097 GTF3C3Q9Y5Q9 886 aa29.81■■■□□ 2.36
RDX-202ENST00000405097 URB2Q14146 1524 aaKnown RBP29.81■■■□□ 2.36
RDX-202ENST00000405097 LAMC3Q9Y6N6 1575 aa29.79■■■□□ 2.36
RDX-202ENST00000405097 RAB3GAP2Q9H2M9 1393 aa29.78■■■□□ 2.36
RDX-202ENST00000405097 DNAJC5BQ9UF47 199 aa29.77■■■□□ 2.36
RDX-202ENST00000405097 CUL7Q14999 1698 aa29.77■■■□□ 2.36
RDX-202ENST00000405097 CFAP43Q8NDM7 1665 aa29.75■■■□□ 2.35
RDX-202ENST00000405097 FAM50AQ14320 339 aaKnown RBP29.74■■■□□ 2.35
RDX-202ENST00000405097 TDRD9Q8NDG6 1382 aaKnown RBP29.73■■■□□ 2.35
RDX-202ENST00000405097 EFCAB5A4FU69 1503 aa29.71■■■□□ 2.35
RDX-202ENST00000405097 WDR97A6NE52 1622 aa29.68■■■□□ 2.34
RDX-202ENST00000405097 CTTNBP2Q8WZ74 1663 aa29.68■■■□□ 2.34
RDX-202ENST00000405097 FYCO1Q9BQS8 1478 aa29.67■■■□□ 2.34
RDX-202ENST00000405097 CASKIN1Q8WXD9 1431 aa29.66■■■□□ 2.34
RDX-202ENST00000405097 SETD5Q9C0A6 1442 aa29.65■■■□□ 2.34
RDX-202ENST00000405097 PDS5BQ9NTI5 1447 aa29.63■■■□□ 2.33
RDX-202ENST00000405097 MAPKBP1O60336 1514 aa29.61■■■□□ 2.33
RDX-202ENST00000405097 ABCA5Q8WWZ7 1642 aa29.6■■■□□ 2.33
RDX-202ENST00000405097 GAPVD1Q14C86 1478 aa29.6■■■□□ 2.33
RDX-202ENST00000405097 AQRO60306 1485 aaKnown RBP eCLIP29.6■■■□□ 2.33
RDX-202ENST00000405097 FMN1Q68DA7 1419 aa29.56■■■□□ 2.32
RDX-202ENST00000405097 KIF21AQ7Z4S6 1674 aa29.53■■■□□ 2.32
RDX-202ENST00000405097 SNAPC4Q5SXM2 1469 aa29.51■■■□□ 2.32
RDX-202ENST00000405097 SAMD9Q5K651 1589 aa29.45■■■□□ 2.31
RDX-202ENST00000405097 SIN3AQ96ST3 1273 aa29.45■■■□□ 2.3
RDX-202ENST00000405097 MTUS2Q5JR59 1369 aa29.44■■■□□ 2.3
RDX-202ENST00000405097 FGD6Q6ZV73 1430 aa29.41■■■□□ 2.3
RDX-202ENST00000405097 PELP1Q8IZL8 1130 aaKnown RBP29.4■■■□□ 2.3
RDX-202ENST00000405097 TARBP1Q13395 1621 aaKnown RBP29.4■■■□□ 2.3
RDX-202ENST00000405097 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.4■■■□□ 2.3
RDX-202ENST00000405097 LRRIQ1Q96JM4 1722 aa29.36■■■□□ 2.29
RDX-202ENST00000405097 GRIN2BQ13224 1484 aa29.35■■■□□ 2.29
RDX-202ENST00000405097 NCOA2Q15596 1464 aa29.29■■■□□ 2.28
RDX-202ENST00000405097 PTPRKQ15262 1439 aa29.27■■■□□ 2.28
RDX-202ENST00000405097 PBRM1Q86U86 1689 aa29.23■■■□□ 2.27
RDX-202ENST00000405097 MYOM3Q5VTT5 1437 aa29.23■■■□□ 2.27
RDX-202ENST00000405097 THOC2Q8NI27 1593 aaKnown RBP29.23■■■□□ 2.27
RDX-202ENST00000405097 CCDC18Q5T9S5 1454 aa29.2■■■□□ 2.26
RDX-202ENST00000405097 EHBP1L1Q8N3D4 1523 aa29.19■■■□□ 2.26
RDX-202ENST00000405097 SUPT6HQ7KZ85 1726 aaKnown RBP29.19■■■□□ 2.26
RDX-202ENST00000405097 MRC2Q9UBG0 1479 aa29.18■■■□□ 2.26
RDX-202ENST00000405097 MAGI3Q5TCQ9 1506 aa29.18■■■□□ 2.26
RDX-202ENST00000405097 HFM1A2PYH4 1435 aa29.17■■■□□ 2.26
RDX-202ENST00000405097 TIMELESSQ9UNS1 1208 aa29.16■■■□□ 2.26
RDX-202ENST00000405097 ADAMTS12P58397 1594 aa29.15■■■□□ 2.26
RDX-202ENST00000405097 IQGAP2Q13576 1575 aa29.15■■■□□ 2.26
RDX-202ENST00000405097 PTPN23Q9H3S7 1636 aa29.14■■■□□ 2.25
RDX-202ENST00000405097 UGGT2Q9NYU1 1516 aa29.13■■■□□ 2.25
RDX-202ENST00000405097 PPP1R15AO75807 674 aaPredicted RBP29.13■■■□□ 2.25
RDX-202ENST00000405097 NAIPQ13075 1403 aa29.11■■■□□ 2.25
RDX-202ENST00000405097 ARID3CA6NKF2 412 aa29.1■■■□□ 2.25
RDX-202ENST00000405097 UACAQ9BZF9 1416 aa29.09■■■□□ 2.25
RDX-202ENST00000405097 DDX10Q13206 875 aaKnown RBP29.08■■■□□ 2.25
RDX-202ENST00000405097 HIRIP3Q9BW71 556 aaPredicted RBP29.08■■■□□ 2.25
RDX-202ENST00000405097 ARHGEF11O15085 1522 aa29.08■■■□□ 2.25
RDX-202ENST00000405097 ZNF608Q9ULD9 1512 aaPredicted RBP29.07■■■□□ 2.24
RDX-202ENST00000405097 HECW1Q76N89 1606 aa29.07■■■□□ 2.24
RDX-202ENST00000405097 KCNH8Q96L42 1107 aa29.06■■■□□ 2.24
RDX-202ENST00000405097 EPRSP07814 1512 aaKnown RBP29.05■■■□□ 2.24
RDX-202ENST00000405097 CDK13Q14004 1512 aaKnown RBP29.04■■■□□ 2.24
RDX-202ENST00000405097 TONSLQ96HA7 1378 aa29.03■■■□□ 2.24
RDX-202ENST00000405097 CHIC2Q9UKJ5 165 aa29.03■■■□□ 2.24
RDX-202ENST00000405097 RRP7BPQ9NSQ0 103 aa29.02■■■□□ 2.24
RDX-202ENST00000405097 IFT140Q96RY7 1462 aa28.99■■■□□ 2.23
RDX-202ENST00000405097 WDR62O43379 1518 aa28.97■■■□□ 2.23
RDX-202ENST00000405097 TCOF1Q13428 1488 aaKnown RBP28.96■■■□□ 2.23
RDX-202ENST00000405097 KIAA0586Q9BVV6 1533 aa28.87■■■□□ 2.21
RDX-202ENST00000405097 TRIM52Q96A61 297 aa28.87■■■□□ 2.21
RDX-202ENST00000405097 DISP1Q96F81 1524 aa28.86■■■□□ 2.21
RDX-202ENST00000405097 MIA2Q96PC5 1412 aa28.85■■■□□ 2.21
RDX-202ENST00000405097 KIAA0556O60303 1618 aa28.84■■■□□ 2.21
RDX-202ENST00000405097 KDM6BO15054 1643 aa28.83■■■□□ 2.21
RDX-202ENST00000405097 GCC2Q8IWJ2 1684 aa28.83■■■□□ 2.21
RDX-202ENST00000405097 GRIN2AQ12879 1464 aa28.81■■■□□ 2.2
RDX-202ENST00000405097 EIF4G3O43432 1585 aaKnown RBP28.81■■■□□ 2.2
RDX-202ENST00000405097 DENND4BO75064 1496 aaPredicted RBP28.8■■■□□ 2.2
RDX-202ENST00000405097 SUPT16HQ9Y5B9 1047 aaKnown RBP28.79■■■□□ 2.2
RDX-202ENST00000405097 AKNAQ7Z591 1439 aa28.78■■■□□ 2.2
RDX-202ENST00000405097 KDM5BQ9UGL1 1544 aa28.78■■■□□ 2.2
RDX-202ENST00000405097 NUP153P49790 1475 aaKnown RBP28.77■■■□□ 2.2
RDX-202ENST00000405097 ERCC6Q03468 1493 aa28.75■■■□□ 2.19
RDX-202ENST00000405097 ZNF644Q9H582 1327 aaPredicted RBP28.73■■■□□ 2.19
RDX-202ENST00000405097 MPHOSPH9Q99550 1183 aa28.73■■■□□ 2.19
RDX-202ENST00000405097 ANP32CO43423 234 aa28.72■■■□□ 2.19
RDX-202ENST00000405097 RAPGEF6Q8TEU7 1601 aa28.71■■■□□ 2.19
RDX-202ENST00000405097 FOXD1Q16676 465 aa28.7■■■□□ 2.19
RDX-202ENST00000405097 CHMP7Q8WUX9 453 aaPredicted RBP28.7■■■□□ 2.18
RDX-202ENST00000405097 DAPK1P53355 1430 aa28.69■■■□□ 2.18
RDX-202ENST00000405097 FBLN2P98095 1184 aa28.68■■■□□ 2.18
RDX-202ENST00000405097 CDK11AQ9UQ88 783 aaPredicted RBP28.66■■■□□ 2.18
RDX-202ENST00000405097 ABCC5O15440 1437 aa28.66■■■□□ 2.18
RDX-202ENST00000405097 CCER2I3L3R5 266 aa28.64■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms