RNA–Protein interactions for RNA: ENST00000404867.7

SLIT3-202, Transcript of slit guidance ligand 3, humanhuman

TSL 5 BASIC

Gene SLIT3, Length 8,903 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIT3-202ENST00000404867 PABPN1Q86U42 306 aaKnown RBP eCLIP12.04□□□□□ -0.48
SLIT3-202ENST00000404867 HNRNPUQ00839 825 aaKnown RBP eCLIP12.04□□□□□ -0.48
SLIT3-202ENST00000404867 PTMAP06454 111 aaKnown RBP12.03□□□□□ -0.48
SLIT3-202ENST00000404867 LOC105371045A0A1W2PR82 267 aa12.03□□□□□ -0.48
SLIT3-202ENST00000404867 CLIP1P30622 1438 aa12.02□□□□□ -0.48
SLIT3-202ENST00000404867 WRNQ14191 1432 aaPredicted RBP eCLIP12.01□□□□□ -0.49
SLIT3-202ENST00000404867 TOP2AP11388 1531 aaKnown RBP12□□□□□ -0.49
SLIT3-202ENST00000404867 DNTTIP2Q5QJE6 756 aaKnown RBP11.99□□□□□ -0.49
SLIT3-202ENST00000404867 TMC1Q8TDI8 760 aa11.99□□□□□ -0.49
SLIT3-202ENST00000404867 WDR43Q15061 677 aaKnown RBP eCLIP11.99□□□□□ -0.49
SLIT3-202ENST00000404867 NBR1Q14596 966 aa11.99□□□□□ -0.49
SLIT3-202ENST00000404867 CDCA8Q53HL2 280 aa11.98□□□□□ -0.49
SLIT3-202ENST00000404867 MSNP26038 577 aaKnown RBP11.96□□□□□ -0.49
SLIT3-202ENST00000404867 ABCC8Q09428 1581 aa11.96□□□□□ -0.49
SLIT3-202ENST00000404867 NAP1L5Q96NT1 182 aaPredicted RBP11.96□□□□□ -0.5
SLIT3-202ENST00000404867 NOP58Q9Y2X3 529 aaKnown RBP11.94□□□□□ -0.5
SLIT3-202ENST00000404867 CEP162Q5TB80 1403 aa11.94□□□□□ -0.5
SLIT3-202ENST00000404867 MTUS2Q5JR59 1369 aa11.94□□□□□ -0.5
SLIT3-202ENST00000404867 TNIKQ9UKE5 1360 aa11.94□□□□□ -0.5
SLIT3-202ENST00000404867 ZNF326Q5BKZ1 582 aaKnown RBP11.93□□□□□ -0.5
SLIT3-202ENST00000404867 NPM1P06748 294 aaKnown RBP eCLIP11.93□□□□□ -0.5
SLIT3-202ENST00000404867 SMARCA4P51532 1647 aa11.92□□□□□ -0.5
SLIT3-202ENST00000404867 CNGB1Q14028 1251 aaPredicted RBP11.91□□□□□ -0.5
SLIT3-202ENST00000404867 ESF1Q9H501 851 aaKnown RBP11.9□□□□□ -0.5
SLIT3-202ENST00000404867 RSPH6AQ9H0K4 717 aa11.89□□□□□ -0.51
SLIT3-202ENST00000404867 SYAP1Q96A49 352 aaPredicted RBP11.89□□□□□ -0.51
SLIT3-202ENST00000404867 HAP1P54257 671 aaPredicted RBP11.89□□□□□ -0.51
SLIT3-202ENST00000404867 PPP4R2Q9NY27 417 aa11.88□□□□□ -0.51
SLIT3-202ENST00000404867 LAS1LQ9Y4W2 734 aaKnown RBP11.88□□□□□ -0.51
SLIT3-202ENST00000404867 CALRP27797 417 aaKnown RBP11.87□□□□□ -0.51
SLIT3-202ENST00000404867 TIMELESSQ9UNS1 1208 aa11.87□□□□□ -0.51
SLIT3-202ENST00000404867 MRS2Q9HD23 443 aa11.86□□□□□ -0.51
SLIT3-202ENST00000404867 KIAA2012Q0VF49 1180 aa11.86□□□□□ -0.51
SLIT3-202ENST00000404867 PNNQ9H307 717 aaKnown RBP11.86□□□□□ -0.51
SLIT3-202ENST00000404867 A0A0U1RQG5 324 aaPredicted RBP11.86□□□□□ -0.51
SLIT3-202ENST00000404867 SETQ01105 290 aaPredicted RBP11.85□□□□□ -0.51
SLIT3-202ENST00000404867 HTATSF1O43719 755 aaKnown RBP11.84□□□□□ -0.51
SLIT3-202ENST00000404867 PDS5BQ9NTI5 1447 aa11.83□□□□□ -0.51
SLIT3-202ENST00000404867 CCDC34Q96HJ3 373 aa11.83□□□□□ -0.52
SLIT3-202ENST00000404867 EIF4G2P78344 907 aaKnown RBP eCLIP11.83□□□□□ -0.52
SLIT3-202ENST00000404867 GOLGA6L1Q8N7Z2 621 aa11.83□□□□□ -0.52
SLIT3-202ENST00000404867 TSPY4P0CV99 314 aa11.83□□□□□ -0.52
SLIT3-202ENST00000404867 TSPY10P0CW01 314 aa11.83□□□□□ -0.52
SLIT3-202ENST00000404867 GBP4Q96PP9 640 aa11.83□□□□□ -0.52
SLIT3-202ENST00000404867 CFAP53Q96M91 514 aa11.83□□□□□ -0.52
SLIT3-202ENST00000404867 TNNT3P45378 269 aaPredicted RBP11.83□□□□□ -0.52
SLIT3-202ENST00000404867 PHF14O94880 888 aa11.82□□□□□ -0.52
SLIT3-202ENST00000404867 MCCP23508 829 aa11.82□□□□□ -0.52
SLIT3-202ENST00000404867 FMN1Q68DA7 1419 aa11.81□□□□□ -0.52
SLIT3-202ENST00000404867 SCAF1Q9H7N4 1312 aaKnown RBP11.81□□□□□ -0.52
SLIT3-202ENST00000404867 HSCBQ8IWL3 235 aa11.81□□□□□ -0.52
SLIT3-202ENST00000404867 GOLGA6L3A6NEY3 463 aa11.8□□□□□ -0.52
SLIT3-202ENST00000404867 ERCC6Q03468 1493 aa11.8□□□□□ -0.52
SLIT3-202ENST00000404867 FBLN2P98095 1184 aa11.8□□□□□ -0.52
SLIT3-202ENST00000404867 MTERF4Q7Z6M4 381 aaKnown RBP11.8□□□□□ -0.52
SLIT3-202ENST00000404867 CHMP4AQ9BY43 222 aa11.8□□□□□ -0.52
SLIT3-202ENST00000404867 BCL11AQ9H165 835 aa11.79□□□□□ -0.52
SLIT3-202ENST00000404867 CSPP1Q1MSJ5 1256 aa11.79□□□□□ -0.52
SLIT3-202ENST00000404867 FAM9BQ8IZU0 186 aa11.78□□□□□ -0.52
SLIT3-202ENST00000404867 FTSJ3Q8IY81 847 aaKnown RBP11.77□□□□□ -0.52
SLIT3-202ENST00000404867 CHMP7Q8WUX9 453 aaPredicted RBP11.76□□□□□ -0.53
SLIT3-202ENST00000404867 CCER2I3L3R5 266 aa11.75□□□□□ -0.53
SLIT3-202ENST00000404867 CHMP4CQ96CF2 233 aa11.75□□□□□ -0.53
SLIT3-202ENST00000404867 GOLGA6L4A6NEF3 574 aa11.75□□□□□ -0.53
SLIT3-202ENST00000404867 TPM4P67936 248 aa11.75□□□□□ -0.53
SLIT3-202ENST00000404867 CARMIL2Q6F5E8 1435 aa11.74□□□□□ -0.53
SLIT3-202ENST00000404867 HSP90AB1P08238 724 aaKnown RBP11.73□□□□□ -0.53
SLIT3-202ENST00000404867 PHLDB1Q86UU1 1377 aa11.73□□□□□ -0.53
SLIT3-202ENST00000404867 DDX10Q13206 875 aaKnown RBP11.72□□□□□ -0.53
SLIT3-202ENST00000404867 ARHGAP35Q9NRY4 1499 aa11.72□□□□□ -0.53
SLIT3-202ENST00000404867 GPS2Q13227 327 aa11.72□□□□□ -0.53
SLIT3-202ENST00000404867 VPS8Q8N3P4 1428 aa11.71□□□□□ -0.53
SLIT3-202ENST00000404867 MAP7D2Q96T17 732 aa11.71□□□□□ -0.54
SLIT3-202ENST00000404867 WIZO95785 1651 aa11.71□□□□□ -0.54
SLIT3-202ENST00000404867 KANK1Q14678 1352 aa11.7□□□□□ -0.54
SLIT3-202ENST00000404867 PLEKHD1A6NEE1 506 aa11.69□□□□□ -0.54
SLIT3-202ENST00000404867 TCERG1O14776 1098 aaKnown RBP11.68□□□□□ -0.54
SLIT3-202ENST00000404867 DEKP35659 375 aaKnown RBP11.68□□□□□ -0.54
SLIT3-202ENST00000404867 KNSTRNQ9Y448 316 aa11.68□□□□□ -0.54
SLIT3-202ENST00000404867 NOM1Q5C9Z4 860 aaKnown RBP11.67□□□□□ -0.54
SLIT3-202ENST00000404867 ARXQ96QS3 562 aa11.67□□□□□ -0.54
SLIT3-202ENST00000404867 HSP90AA2PQ14568 343 aaPredicted RBP11.67□□□□□ -0.54
SLIT3-202ENST00000404867 DDX11L8A8MPP1 907 aa11.67□□□□□ -0.54
SLIT3-202ENST00000404867 CUX1P39880 1505 aa11.67□□□□□ -0.54
SLIT3-202ENST00000404867 HDAC5Q9UQL6 1122 aa11.67□□□□□ -0.54
SLIT3-202ENST00000404867 SKOR2Q2VWA4 1001 aaPredicted RBP11.67□□□□□ -0.54
SLIT3-202ENST00000404867 CCDC18Q5T9S5 1454 aa11.66□□□□□ -0.54
SLIT3-202ENST00000404867 NUDCQ9Y266 331 aa11.66□□□□□ -0.54
SLIT3-202ENST00000404867 STAG3Q9UJ98 1225 aa11.66□□□□□ -0.54
SLIT3-202ENST00000404867 CALD1Q05682 793 aaKnown RBP11.65□□□□□ -0.54
SLIT3-202ENST00000404867 DRC7Q8IY82 874 aa11.64□□□□□ -0.55
SLIT3-202ENST00000404867 KIF3AQ9Y496 699 aa11.64□□□□□ -0.55
SLIT3-202ENST00000404867 CCDC70Q6NSX1 233 aa11.63□□□□□ -0.55
SLIT3-202ENST00000404867 CCNB3Q8WWL7 1395 aa11.63□□□□□ -0.55
SLIT3-202ENST00000404867 MROH2BQ7Z745 1585 aa11.63□□□□□ -0.55
SLIT3-202ENST00000404867 CCDC88BA6NC98 1476 aa11.63□□□□□ -0.55
SLIT3-202ENST00000404867 KIF21BO75037 1637 aa11.63□□□□□ -0.55
SLIT3-202ENST00000404867 TEX35Q5T0J7 233 aa11.63□□□□□ -0.55
SLIT3-202ENST00000404867 NOC3LQ8WTT2 800 aaKnown RBP11.62□□□□□ -0.55
SLIT3-202ENST00000404867 RSPH4AQ5TD94 716 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms