RNA–Protein interactions for RNA: ENST00000404525.5

LTBP1-202, Transcript of latent transforming growth factor beta binding protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LTBP1, Length 5,092 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP1-202ENST00000404525 PEG3Q9GZU2 1588 aa11.26□□□□□ -0.61
LTBP1-202ENST00000404525 ZNF777Q9ULD5 760 aaPredicted RBP11.21□□□□□ -0.61
LTBP1-202ENST00000404525 NESP48681 1621 aa11.2□□□□□ -0.62
LTBP1-202ENST00000404525 DNAJC5BQ9UF47 199 aa11.2□□□□□ -0.62
LTBP1-202ENST00000404525 MTUS2Q5JR59 1369 aa11.2□□□□□ -0.62
LTBP1-202ENST00000404525 TRIM52Q96A61 297 aa11.2□□□□□ -0.62
LTBP1-202ENST00000404525 FGD5Q6ZNL6 1462 aa11.2□□□□□ -0.62
LTBP1-202ENST00000404525 LAMC3Q9Y6N6 1575 aa11.19□□□□□ -0.62
LTBP1-202ENST00000404525 SLC4A1APQ9BWU0 796 aaKnown RBP11.18□□□□□ -0.62
LTBP1-202ENST00000404525 MRC2Q9UBG0 1479 aa11.18□□□□□ -0.62
LTBP1-202ENST00000404525 ANP32CO43423 234 aa11.16□□□□□ -0.62
LTBP1-202ENST00000404525 RAPGEF2Q9Y4G8 1499 aa11.16□□□□□ -0.62
LTBP1-202ENST00000404525 PLEKHD1A6NEE1 506 aa11.16□□□□□ -0.62
LTBP1-202ENST00000404525 RBM19Q9Y4C8 960 aaKnown RBP11.16□□□□□ -0.62
LTBP1-202ENST00000404525 CARMIL2Q6F5E8 1435 aa11.15□□□□□ -0.62
LTBP1-202ENST00000404525 FHAD1B1AJZ9 1412 aa11.14□□□□□ -0.63
LTBP1-202ENST00000404525 GAPVD1Q14C86 1478 aa11.13□□□□□ -0.63
LTBP1-202ENST00000404525 RAD54L2Q9Y4B4 1467 aa11.11□□□□□ -0.63
LTBP1-202ENST00000404525 TOPBP1Q92547 1522 aa11.09□□□□□ -0.63
LTBP1-202ENST00000404525 IFT140Q96RY7 1462 aa11.08□□□□□ -0.64
LTBP1-202ENST00000404525 DNMBPQ6XZF7 1577 aa11.08□□□□□ -0.64
LTBP1-202ENST00000404525 KCNH8Q96L42 1107 aa11.08□□□□□ -0.64
LTBP1-202ENST00000404525 DDX10Q13206 875 aaKnown RBP11.07□□□□□ -0.64
LTBP1-202ENST00000404525 TOP2BQ02880 1626 aa11.07□□□□□ -0.64
LTBP1-202ENST00000404525 TSPY4P0CV99 314 aa11.06□□□□□ -0.64
LTBP1-202ENST00000404525 TSPY10P0CW01 314 aa11.06□□□□□ -0.64
LTBP1-202ENST00000404525 SYNJ1O43426 1573 aa11.06□□□□□ -0.64
LTBP1-202ENST00000404525 ZNF326Q5BKZ1 582 aaKnown RBP11.06□□□□□ -0.64
LTBP1-202ENST00000404525 FMN1Q68DA7 1419 aa11.04□□□□□ -0.64
LTBP1-202ENST00000404525 GRIN2BQ13224 1484 aa11.04□□□□□ -0.64
LTBP1-202ENST00000404525 CUX1P39880 1505 aa11.04□□□□□ -0.64
LTBP1-202ENST00000404525 RUSC2Q8N2Y8 1516 aa11.04□□□□□ -0.64
LTBP1-202ENST00000404525 ESF1Q9H501 851 aaKnown RBP11.04□□□□□ -0.64
LTBP1-202ENST00000404525 IGF1RP08069 1367 aa11.04□□□□□ -0.64
LTBP1-202ENST00000404525 AQRO60306 1485 aaKnown RBP eCLIP11.04□□□□□ -0.64
LTBP1-202ENST00000404525 POLA1P09884 1462 aaPredicted RBP11.03□□□□□ -0.64
LTBP1-202ENST00000404525 JPH4Q96JJ6 628 aa11.02□□□□□ -0.65
LTBP1-202ENST00000404525 OSCARQ8IYS5 282 aa11.02□□□□□ -0.65
LTBP1-202ENST00000404525 VPS8Q8N3P4 1428 aa11.01□□□□□ -0.65
LTBP1-202ENST00000404525 CFDP1Q9UEE9 299 aaPredicted RBP11□□□□□ -0.65
LTBP1-202ENST00000404525 ZBTB47Q9UFB7 747 aaPredicted RBP11□□□□□ -0.65
LTBP1-202ENST00000404525 CHIC2Q9UKJ5 165 aa10.98□□□□□ -0.65
LTBP1-202ENST00000404525 DEKP35659 375 aaKnown RBP10.97□□□□□ -0.65
LTBP1-202ENST00000404525 ANP32AP39687 249 aaKnown RBP10.97□□□□□ -0.65
LTBP1-202ENST00000404525 CCNB3Q8WWL7 1395 aa10.97□□□□□ -0.65
LTBP1-202ENST00000404525 NBR1Q14596 966 aa10.96□□□□□ -0.66
LTBP1-202ENST00000404525 HNRNPUQ00839 825 aaKnown RBP eCLIP10.95□□□□□ -0.66
LTBP1-202ENST00000404525 FHOD3Q2V2M9 1422 aa10.95□□□□□ -0.66
LTBP1-202ENST00000404525 DHX57Q6P158 1386 aaKnown RBP10.94□□□□□ -0.66
LTBP1-202ENST00000404525 ABCA10Q8WWZ4 1543 aa10.94□□□□□ -0.66
LTBP1-202ENST00000404525 FANCIQ9NVI1 1328 aa10.93□□□□□ -0.66
LTBP1-202ENST00000404525 IRX6P78412 446 aaPredicted RBP10.93□□□□□ -0.66
LTBP1-202ENST00000404525 PRKCSHP14314 528 aaPredicted RBP10.93□□□□□ -0.66
LTBP1-202ENST00000404525 ERICH3Q5RHP9 1530 aa10.93□□□□□ -0.66
LTBP1-202ENST00000404525 CANXP27824 592 aaKnown RBP10.92□□□□□ -0.66
LTBP1-202ENST00000404525 GLIPR1L2Q4G1C9 344 aa10.92□□□□□ -0.66
LTBP1-202ENST00000404525 URB2Q14146 1524 aaKnown RBP10.92□□□□□ -0.66
LTBP1-202ENST00000404525 KIF21BO75037 1637 aa10.92□□□□□ -0.66
LTBP1-202ENST00000404525 PTPRGP23470 1445 aa10.92□□□□□ -0.66
LTBP1-202ENST00000404525 CCER2I3L3R5 266 aa10.91□□□□□ -0.66
LTBP1-202ENST00000404525 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.91□□□□□ -0.66
LTBP1-202ENST00000404525 SNAPC4Q5SXM2 1469 aa10.9□□□□□ -0.66
LTBP1-202ENST00000404525 NEFMP07197 916 aa10.89□□□□□ -0.67
LTBP1-202ENST00000404525 ARHGAP35Q9NRY4 1499 aa10.89□□□□□ -0.67
LTBP1-202ENST00000404525 BIVM-ERCC5R4GMW8 1640 aa10.89□□□□□ -0.67
LTBP1-202ENST00000404525 TRHP20396 242 aaPredicted RBP10.89□□□□□ -0.67
LTBP1-202ENST00000404525 RRP7BPQ9NSQ0 103 aa10.88□□□□□ -0.67
LTBP1-202ENST00000404525 STAG3Q9UJ98 1225 aa10.88□□□□□ -0.67
LTBP1-202ENST00000404525 NOP58Q9Y2X3 529 aaKnown RBP10.87□□□□□ -0.67
LTBP1-202ENST00000404525 PPP4R2Q9NY27 417 aa10.87□□□□□ -0.67
LTBP1-202ENST00000404525 HIRIP3Q9BW71 556 aaPredicted RBP10.86□□□□□ -0.67
LTBP1-202ENST00000404525 CCDC18Q5T9S5 1454 aa10.86□□□□□ -0.67
LTBP1-202ENST00000404525 TONSLQ96HA7 1378 aa10.86□□□□□ -0.67
LTBP1-202ENST00000404525 PRXQ9BXM0 1461 aa10.85□□□□□ -0.67
LTBP1-202ENST00000404525 CUL7Q14999 1698 aa10.85□□□□□ -0.67
LTBP1-202ENST00000404525 CHGAP10645 457 aaKnown RBP10.85□□□□□ -0.67
LTBP1-202ENST00000404525 MSH5O43196 834 aa10.84□□□□□ -0.67
LTBP1-202ENST00000404525 MAGI1Q96QZ7 1491 aaPredicted RBP10.84□□□□□ -0.67
LTBP1-202ENST00000404525 EFCAB2Q5VUJ9 269 aa10.84□□□□□ -0.67
LTBP1-202ENST00000404525 ERICH6BQ5W0A0 696 aa10.83□□□□□ -0.68
LTBP1-202ENST00000404525 EIF5BO60841 1220 aaKnown RBP10.83□□□□□ -0.68
LTBP1-202ENST00000404525 CYB5RLQ6IPT4 315 aa10.83□□□□□ -0.68
LTBP1-202ENST00000404525 KANK4Q5T7N3 995 aaPredicted RBP10.82□□□□□ -0.68
LTBP1-202ENST00000404525 SYNJ2O15056 1496 aa10.82□□□□□ -0.68
LTBP1-202ENST00000404525 PRDM2Q13029 1718 aa10.82□□□□□ -0.68
LTBP1-202ENST00000404525 ARID4BQ4LE39 1312 aaPredicted RBP10.81□□□□□ -0.68
LTBP1-202ENST00000404525 KIF21AQ7Z4S6 1674 aa10.81□□□□□ -0.68
LTBP1-202ENST00000404525 PLPPR3Q6T4P5 718 aa10.81□□□□□ -0.68
LTBP1-202ENST00000404525 PRG4Q92954 1404 aaPredicted RBP10.81□□□□□ -0.68
LTBP1-202ENST00000404525 EFCAB5A4FU69 1503 aa10.81□□□□□ -0.68
LTBP1-202ENST00000404525 NPM2Q86SE8 214 aaKnown RBP10.81□□□□□ -0.68
LTBP1-202ENST00000404525 SIN3AQ96ST3 1273 aa10.79□□□□□ -0.68
LTBP1-202ENST00000404525 KIAA0586Q9BVV6 1533 aa10.78□□□□□ -0.68
LTBP1-202ENST00000404525 ANP32BQ92688 251 aaKnown RBP10.78□□□□□ -0.68
LTBP1-202ENST00000404525 TIMELESSQ9UNS1 1208 aa10.78□□□□□ -0.68
LTBP1-202ENST00000404525 SLC24A1O60721 1099 aa10.78□□□□□ -0.68
LTBP1-202ENST00000404525 UPF2Q9HAU5 1272 aaKnown RBP10.77□□□□□ -0.68
LTBP1-202ENST00000404525 ZNF608Q9ULD9 1512 aaPredicted RBP10.77□□□□□ -0.69
LTBP1-202ENST00000404525 RSPH4AQ5TD94 716 aa10.77□□□□□ -0.69
LTBP1-202ENST00000404525 B4GALNT3Q6L9W6 998 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms