RNA–Protein interactions for RNA: ENST00000402989.5

SMC6-203, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMC6, Length 3,729 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-203ENST00000402989 DNAJC5BQ9UF47 199 aa6.38□□□□□ -1.39
SMC6-203ENST00000402989 FGD5Q6ZNL6 1462 aa6.38□□□□□ -1.39
SMC6-203ENST00000402989 NESP48681 1621 aa6.38□□□□□ -1.39
SMC6-203ENST00000402989 PBRM1Q86U86 1689 aa6.37□□□□□ -1.39
SMC6-203ENST00000402989 RAD54L2Q9Y4B4 1467 aa6.37□□□□□ -1.39
SMC6-203ENST00000402989 IGF1RP08069 1367 aa6.37□□□□□ -1.39
SMC6-203ENST00000402989 ARHGAP35Q9NRY4 1499 aa6.37□□□□□ -1.39
SMC6-203ENST00000402989 ERICH3Q5RHP9 1530 aa6.36□□□□□ -1.39
SMC6-203ENST00000402989 HIRIP3Q9BW71 556 aaPredicted RBP6.36□□□□□ -1.39
SMC6-203ENST00000402989 DHX57Q6P158 1386 aaKnown RBP6.35□□□□□ -1.39
SMC6-203ENST00000402989 CCNB3Q8WWL7 1395 aa6.35□□□□□ -1.39
SMC6-203ENST00000402989 FANCD2Q9BXW9 1451 aa6.35□□□□□ -1.39
SMC6-203ENST00000402989 FHOD3Q2V2M9 1422 aa6.34□□□□□ -1.39
SMC6-203ENST00000402989 SIN3AQ96ST3 1273 aa6.34□□□□□ -1.39
SMC6-203ENST00000402989 TDRD9Q8NDG6 1382 aaKnown RBP6.34□□□□□ -1.4
SMC6-203ENST00000402989 SLC24A1O60721 1099 aa6.32□□□□□ -1.4
SMC6-203ENST00000402989 RAB3GAP2Q9H2M9 1393 aa6.32□□□□□ -1.4
SMC6-203ENST00000402989 CUL7Q14999 1698 aa6.32□□□□□ -1.4
SMC6-203ENST00000402989 URB2Q14146 1524 aaKnown RBP6.31□□□□□ -1.4
SMC6-203ENST00000402989 SHROOM2Q13796 1616 aa6.31□□□□□ -1.4
SMC6-203ENST00000402989 PHLDB1Q86UU1 1377 aa6.3□□□□□ -1.4
SMC6-203ENST00000402989 ABCA10Q8WWZ4 1543 aa6.3□□□□□ -1.4
SMC6-203ENST00000402989 CTTNBP2Q8WZ74 1663 aa6.3□□□□□ -1.4
SMC6-203ENST00000402989 CHIC2Q9UKJ5 165 aa6.29□□□□□ -1.4
SMC6-203ENST00000402989 POLA1P09884 1462 aaPredicted RBP6.28□□□□□ -1.4
SMC6-203ENST00000402989 DDX10Q13206 875 aaKnown RBP6.28□□□□□ -1.4
SMC6-203ENST00000402989 RRBP1Q9P2E9 1410 aaKnown RBP6.28□□□□□ -1.4
SMC6-203ENST00000402989 KCNH8Q96L42 1107 aa6.28□□□□□ -1.4
SMC6-203ENST00000402989 TOPBP1Q92547 1522 aa6.28□□□□□ -1.4
SMC6-203ENST00000402989 MTUS2Q5JR59 1369 aa6.27□□□□□ -1.4
SMC6-203ENST00000402989 LRRIQ1Q96JM4 1722 aa6.27□□□□□ -1.41
SMC6-203ENST00000402989 TIAM1Q13009 1591 aa6.27□□□□□ -1.41
SMC6-203ENST00000402989 PCF11O94913 1555 aaKnown RBP6.27□□□□□ -1.41
SMC6-203ENST00000402989 LRRC9Q6ZRR7 1453 aa6.27□□□□□ -1.41
SMC6-203ENST00000402989 SAMD9Q5K651 1589 aa6.26□□□□□ -1.41
SMC6-203ENST00000402989 RRP7BPQ9NSQ0 103 aa6.26□□□□□ -1.41
SMC6-203ENST00000402989 FHAD1B1AJZ9 1412 aa6.26□□□□□ -1.41
SMC6-203ENST00000402989 SETD5Q9C0A6 1442 aa6.26□□□□□ -1.41
SMC6-203ENST00000402989 TRIM52Q96A61 297 aa6.25□□□□□ -1.41
SMC6-203ENST00000402989 FBLN2P98095 1184 aa6.25□□□□□ -1.41
SMC6-203ENST00000402989 CNGB1Q14028 1251 aaPredicted RBP6.25□□□□□ -1.41
SMC6-203ENST00000402989 BCANQ96GW7 911 aa6.25□□□□□ -1.41
SMC6-203ENST00000402989 ADAMTS12P58397 1594 aa6.25□□□□□ -1.41
SMC6-203ENST00000402989 CLSPNQ9HAW4 1339 aa6.24□□□□□ -1.41
SMC6-203ENST00000402989 PELP1Q8IZL8 1130 aaKnown RBP6.23□□□□□ -1.41
SMC6-203ENST00000402989 GAPVD1Q14C86 1478 aa6.22□□□□□ -1.41
SMC6-203ENST00000402989 EIF4G3O43432 1585 aaKnown RBP6.22□□□□□ -1.41
SMC6-203ENST00000402989 AQRO60306 1485 aaKnown RBP eCLIP6.21□□□□□ -1.412e-6■■■□□ 16
SMC6-203ENST00000402989 MRC2Q9UBG0 1479 aa6.21□□□□□ -1.41
SMC6-203ENST00000402989 FOXD1Q16676 465 aa6.21□□□□□ -1.41
SMC6-203ENST00000402989 TONSLQ96HA7 1378 aa6.21□□□□□ -1.42
SMC6-203ENST00000402989 MAPKBP1O60336 1514 aa6.21□□□□□ -1.42
SMC6-203ENST00000402989 PDS5BQ9NTI5 1447 aa6.2□□□□□ -1.42
SMC6-203ENST00000402989 FMN1Q68DA7 1419 aa6.2□□□□□ -1.42
SMC6-203ENST00000402989 CASKIN1Q8WXD9 1431 aa6.19□□□□□ -1.42
SMC6-203ENST00000402989 ZNF777Q9ULD5 760 aaPredicted RBP6.19□□□□□ -1.42
SMC6-203ENST00000402989 FYCO1Q9BQS8 1478 aa6.19□□□□□ -1.42
SMC6-203ENST00000402989 FGD6Q6ZV73 1430 aa6.19□□□□□ -1.42
SMC6-203ENST00000402989 POLR3GLQ9BT43 218 aa6.19□□□□□ -1.42
SMC6-203ENST00000402989 CLASP1Q7Z460 1538 aa6.18□□□□□ -1.42
SMC6-203ENST00000402989 CFAP43Q8NDM7 1665 aa6.17□□□□□ -1.42
SMC6-203ENST00000402989 CCDC18Q5T9S5 1454 aa6.17□□□□□ -1.42
SMC6-203ENST00000402989 ZNF326Q5BKZ1 582 aaKnown RBP6.17□□□□□ -1.42
SMC6-203ENST00000402989 PTPRKQ15262 1439 aa6.17□□□□□ -1.42
SMC6-203ENST00000402989 NCOA2Q15596 1464 aa6.17□□□□□ -1.42
SMC6-203ENST00000402989 ANP32CO43423 234 aa6.16□□□□□ -1.42
SMC6-203ENST00000402989 PPP1R15AO75807 674 aaPredicted RBP6.16□□□□□ -1.42
SMC6-203ENST00000402989 SUPT16HQ9Y5B9 1047 aaKnown RBP6.16□□□□□ -1.42
SMC6-203ENST00000402989 EFCAB5A4FU69 1503 aa6.16□□□□□ -1.42
SMC6-203ENST00000402989 CDK13Q14004 1512 aaKnown RBP6.15□□□□□ -1.42
SMC6-203ENST00000402989 ZNF644Q9H582 1327 aaPredicted RBP6.15□□□□□ -1.42
SMC6-203ENST00000402989 MAP3K1Q13233 1512 aa6.15□□□□□ -1.42
SMC6-203ENST00000402989 SENP3-EIF4A1A0A087X0R7 540 aa6.15□□□□□ -1.43
SMC6-203ENST00000402989 FKBP8Q14318 412 aa6.15□□□□□ -1.43
SMC6-203ENST00000402989 SNAPC4Q5SXM2 1469 aa6.15□□□□□ -1.43
SMC6-203ENST00000402989 CHMP7Q8WUX9 453 aaPredicted RBP6.14□□□□□ -1.43
SMC6-203ENST00000402989 MYOM3Q5VTT5 1437 aa6.14□□□□□ -1.43
SMC6-203ENST00000402989 ZNF608Q9ULD9 1512 aaPredicted RBP6.14□□□□□ -1.43
SMC6-203ENST00000402989 CHD1O14646 1710 aa6.14□□□□□ -1.43
SMC6-203ENST00000402989 ADCY10Q96PN6 1610 aa6.13□□□□□ -1.43
SMC6-203ENST00000402989 IFT140Q96RY7 1462 aa6.13□□□□□ -1.43
SMC6-203ENST00000402989 IRX6P78412 446 aaPredicted RBP6.13□□□□□ -1.43
SMC6-203ENST00000402989 ERCC6Q03468 1493 aa6.12□□□□□ -1.43
SMC6-203ENST00000402989 UGGT2Q9NYU1 1516 aa6.12□□□□□ -1.43
SMC6-203ENST00000402989 NAIPQ13075 1403 aa6.12□□□□□ -1.43
SMC6-203ENST00000402989 MAGI3Q5TCQ9 1506 aa6.12□□□□□ -1.43
SMC6-203ENST00000402989 NEFLP07196 543 aa6.11□□□□□ -1.43
SMC6-203ENST00000402989 HSPA5P11021 654 aaKnown RBP6.11□□□□□ -1.43
SMC6-203ENST00000402989 SLC4A1APQ9BWU0 796 aaKnown RBP6.11□□□□□ -1.43
SMC6-203ENST00000402989 GRIN2BQ13224 1484 aa6.11□□□□□ -1.43
SMC6-203ENST00000402989 SUPT6HQ7KZ85 1726 aaKnown RBP6.11□□□□□ -1.43
SMC6-203ENST00000402989 CEP170Q5SW79 1584 aa6.11□□□□□ -1.43
SMC6-203ENST00000402989 HNRNPUQ00839 825 aaKnown RBP eCLIP6.11□□□□□ -1.43
SMC6-203ENST00000402989 MPHOSPH9Q99550 1183 aa6.11□□□□□ -1.43
SMC6-203ENST00000402989 PTPN23Q9H3S7 1636 aa6.1□□□□□ -1.43
SMC6-203ENST00000402989 ARHGEF11O15085 1522 aa6.1□□□□□ -1.43
SMC6-203ENST00000402989 UACAQ9BZF9 1416 aa6.1□□□□□ -1.43
SMC6-203ENST00000402989 HFM1A2PYH4 1435 aa6.1□□□□□ -1.43
SMC6-203ENST00000402989 L3MBTL2Q969R5 705 aa6.1□□□□□ -1.43
SMC6-203ENST00000402989 IQGAP2Q13576 1575 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms