RNA–Protein interactions for RNA: ENST00000402314.6

ATG3-202, Transcript of autophagy related 3, humanhuman

TSL 1 (best) BASIC

Gene ATG3, Length 3,010 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-202ENST00000402314 SUPT16HQ9Y5B9 1047 aaKnown RBP20.54■□□□□ 0.88
ATG3-202ENST00000402314 BCANQ96GW7 911 aa20.52■□□□□ 0.88
ATG3-202ENST00000402314 FAM50AQ14320 339 aaKnown RBP20.5■□□□□ 0.87
ATG3-202ENST00000402314 POLA1P09884 1462 aaPredicted RBP20.49■□□□□ 0.87
ATG3-202ENST00000402314 FHOD3Q2V2M9 1422 aa20.48■□□□□ 0.87
ATG3-202ENST00000402314 TOPBP1Q92547 1522 aa20.46■□□□□ 0.87
ATG3-202ENST00000402314 PHLDB1Q86UU1 1377 aa20.46■□□□□ 0.87
ATG3-202ENST00000402314 TDRD9Q8NDG6 1382 aaKnown RBP20.44■□□□□ 0.86
ATG3-202ENST00000402314 TSHZ2Q9NRE2 1034 aa20.43■□□□□ 0.86
ATG3-202ENST00000402314 TIAM1Q13009 1591 aa20.42■□□□□ 0.86
ATG3-202ENST00000402314 RAB3GAP2Q9H2M9 1393 aa20.42■□□□□ 0.86
ATG3-202ENST00000402314 LRRC9Q6ZRR7 1453 aa20.4■□□□□ 0.86
ATG3-202ENST00000402314 DNMBPQ6XZF7 1577 aa20.4■□□□□ 0.86
ATG3-202ENST00000402314 CLSPNQ9HAW4 1339 aa20.39■□□□□ 0.86
ATG3-202ENST00000402314 ABCA10Q8WWZ4 1543 aa20.38■□□□□ 0.85
ATG3-202ENST00000402314 KCNH8Q96L42 1107 aa20.37■□□□□ 0.85
ATG3-202ENST00000402314 PCF11O94913 1555 aaKnown RBP20.36■□□□□ 0.85
ATG3-202ENST00000402314 URB2Q14146 1524 aaKnown RBP20.35■□□□□ 0.85
ATG3-202ENST00000402314 SIN3AQ96ST3 1273 aa20.35■□□□□ 0.85
ATG3-202ENST00000402314 ANP32EQ9BTT0 268 aa20.33■□□□□ 0.85
ATG3-202ENST00000402314 FHAD1B1AJZ9 1412 aa20.33■□□□□ 0.85
ATG3-202ENST00000402314 BCL11AQ9H165 835 aa20.33■□□□□ 0.84
ATG3-202ENST00000402314 SETD5Q9C0A6 1442 aa20.27■□□□□ 0.84
ATG3-202ENST00000402314 MAP3K1Q13233 1512 aa20.26■□□□□ 0.83
ATG3-202ENST00000402314 MAPKBP1O60336 1514 aa20.24■□□□□ 0.83
ATG3-202ENST00000402314 ARID3CA6NKF2 412 aa20.22■□□□□ 0.83
ATG3-202ENST00000402314 HIRIP3Q9BW71 556 aaPredicted RBP20.21■□□□□ 0.83
ATG3-202ENST00000402314 GAPVD1Q14C86 1478 aa20.2■□□□□ 0.82
ATG3-202ENST00000402314 CASKIN1Q8WXD9 1431 aa20.2■□□□□ 0.82
ATG3-202ENST00000402314 FKBP8Q14318 412 aa20.18■□□□□ 0.82
ATG3-202ENST00000402314 LAMC3Q9Y6N6 1575 aa20.18■□□□□ 0.82
ATG3-202ENST00000402314 FYCO1Q9BQS8 1478 aa20.17■□□□□ 0.82
ATG3-202ENST00000402314 MTUS2Q5JR59 1369 aa20.17■□□□□ 0.82
ATG3-202ENST00000402314 PDS5BQ9NTI5 1447 aa20.17■□□□□ 0.82
ATG3-202ENST00000402314 CFAP43Q8NDM7 1665 aa20.16■□□□□ 0.82
ATG3-202ENST00000402314 CUL7Q14999 1698 aa20.15■□□□□ 0.82
ATG3-202ENST00000402314 EFCAB5A4FU69 1503 aa20.14■□□□□ 0.81
ATG3-202ENST00000402314 FMN1Q68DA7 1419 aa20.13■□□□□ 0.81
ATG3-202ENST00000402314 CTTNBP2Q8WZ74 1663 aa20.12■□□□□ 0.81
ATG3-202ENST00000402314 SNAPC4Q5SXM2 1469 aa20.12■□□□□ 0.81
ATG3-202ENST00000402314 AQRO60306 1485 aaKnown RBP eCLIP20.1■□□□□ 0.81
ATG3-202ENST00000402314 KIF21AQ7Z4S6 1674 aa20.1■□□□□ 0.81
ATG3-202ENST00000402314 PTPRKQ15262 1439 aa20.09■□□□□ 0.81
ATG3-202ENST00000402314 FGD6Q6ZV73 1430 aa20.09■□□□□ 0.81
ATG3-202ENST00000402314 WDR97A6NE52 1622 aa20.09■□□□□ 0.81
ATG3-202ENST00000402314 DDX10Q13206 875 aaKnown RBP20.09■□□□□ 0.81
ATG3-202ENST00000402314 ABCA5Q8WWZ7 1642 aa20.09■□□□□ 0.81
ATG3-202ENST00000402314 CHIC2Q9UKJ5 165 aa20.07■□□□□ 0.8
ATG3-202ENST00000402314 TRIM52Q96A61 297 aa20.02■□□□□ 0.8
ATG3-202ENST00000402314 RRP7BPQ9NSQ0 103 aa20.02■□□□□ 0.8
ATG3-202ENST00000402314 NCOA2Q15596 1464 aa20.02■□□□□ 0.79
ATG3-202ENST00000402314 LRRIQ1Q96JM4 1722 aa20■□□□□ 0.79
ATG3-202ENST00000402314 GRIN2BQ13224 1484 aa19.99■□□□□ 0.79
ATG3-202ENST00000402314 SAMD9Q5K651 1589 aa19.99■□□□□ 0.79
ATG3-202ENST00000402314 RBM19Q9Y4C8 960 aaKnown RBP19.99■□□□□ 0.79
ATG3-202ENST00000402314 PPP1R15AO75807 674 aaPredicted RBP19.98■□□□□ 0.79
ATG3-202ENST00000402314 TARBP1Q13395 1621 aaKnown RBP19.98■□□□□ 0.79
ATG3-202ENST00000402314 CCDC18Q5T9S5 1454 aa19.97■□□□□ 0.79
ATG3-202ENST00000402314 MAGI3Q5TCQ9 1506 aa19.96■□□□□ 0.79
ATG3-202ENST00000402314 MYOM3Q5VTT5 1437 aa19.95■□□□□ 0.78
ATG3-202ENST00000402314 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.94■□□□□ 0.78
ATG3-202ENST00000402314 ZNF608Q9ULD9 1512 aaPredicted RBP19.93■□□□□ 0.78
ATG3-202ENST00000402314 NAIPQ13075 1403 aa19.91■□□□□ 0.78
ATG3-202ENST00000402314 TONSLQ96HA7 1378 aa19.91■□□□□ 0.78
ATG3-202ENST00000402314 HFM1A2PYH4 1435 aa19.9■□□□□ 0.78
ATG3-202ENST00000402314 CDK13Q14004 1512 aaKnown RBP19.9■□□□□ 0.78
ATG3-202ENST00000402314 NEFLP07196 543 aa19.9■□□□□ 0.78
ATG3-202ENST00000402314 IRX6P78412 446 aaPredicted RBP19.89■□□□□ 0.78
ATG3-202ENST00000402314 FOXD1Q16676 465 aa19.87■□□□□ 0.77
ATG3-202ENST00000402314 PTPN23Q9H3S7 1636 aa19.86■□□□□ 0.77
ATG3-202ENST00000402314 UACAQ9BZF9 1416 aa19.85■□□□□ 0.77
ATG3-202ENST00000402314 MRC2Q9UBG0 1479 aa19.85■□□□□ 0.77
ATG3-202ENST00000402314 EHBP1L1Q8N3D4 1523 aa19.84■□□□□ 0.77
ATG3-202ENST00000402314 SUPT6HQ7KZ85 1726 aaKnown RBP19.84■□□□□ 0.77
ATG3-202ENST00000402314 TIMELESSQ9UNS1 1208 aa19.83■□□□□ 0.77
ATG3-202ENST00000402314 IQGAP2Q13576 1575 aa19.83■□□□□ 0.77
ATG3-202ENST00000402314 EPRSP07814 1512 aaKnown RBP19.83■□□□□ 0.76
ATG3-202ENST00000402314 PBRM1Q86U86 1689 aa19.83■□□□□ 0.76
ATG3-202ENST00000402314 FBLN2P98095 1184 aa19.83■□□□□ 0.76
ATG3-202ENST00000402314 UGGT2Q9NYU1 1516 aa19.83■□□□□ 0.76
ATG3-202ENST00000402314 MSH5O43196 834 aa19.82■□□□□ 0.76
ATG3-202ENST00000402314 ZNF644Q9H582 1327 aaPredicted RBP19.82■□□□□ 0.76
ATG3-202ENST00000402314 ADAMTS12P58397 1594 aa19.81■□□□□ 0.76
ATG3-202ENST00000402314 THOC2Q8NI27 1593 aaKnown RBP19.77■□□□□ 0.76
ATG3-202ENST00000402314 KDM6BO15054 1643 aa19.76■□□□□ 0.75
ATG3-202ENST00000402314 ARHGEF11O15085 1522 aa19.76■□□□□ 0.75
ATG3-202ENST00000402314 HECW1Q76N89 1606 aa19.74■□□□□ 0.75
ATG3-202ENST00000402314 ERICH6Q7L0X2 663 aa19.72■□□□□ 0.75
ATG3-202ENST00000402314 MPHOSPH9Q99550 1183 aa19.72■□□□□ 0.75
ATG3-202ENST00000402314 DENND4BO75064 1496 aaPredicted RBP19.72■□□□□ 0.75
ATG3-202ENST00000402314 ANP32CO43423 234 aa19.72■□□□□ 0.75
ATG3-202ENST00000402314 WDR62O43379 1518 aa19.72■□□□□ 0.75
ATG3-202ENST00000402314 CHMP7Q8WUX9 453 aaPredicted RBP19.7■□□□□ 0.74
ATG3-202ENST00000402314 IFT140Q96RY7 1462 aa19.7■□□□□ 0.74
ATG3-202ENST00000402314 DISP1Q96F81 1524 aa19.69■□□□□ 0.74
ATG3-202ENST00000402314 ZNF777Q9ULD5 760 aaPredicted RBP19.69■□□□□ 0.74
ATG3-202ENST00000402314 TCOF1Q13428 1488 aaKnown RBP19.67■□□□□ 0.74
ATG3-202ENST00000402314 L3MBTL2Q969R5 705 aa19.67■□□□□ 0.74
ATG3-202ENST00000402314 ERCC6Q03468 1493 aa19.66■□□□□ 0.74
ATG3-202ENST00000402314 HSPA5P11021 654 aaKnown RBP19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms