RNA–Protein interactions for RNA: ENST00000399949.6

SPATA13-204, Transcript of spermatogenesis associated 13, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SPATA13, Length 3,026 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPATA13-204ENST00000399949 ATP1B4Q9UN42 357 aaPredicted RBP13.41□□□□□ -0.26
SPATA13-204ENST00000399949 PEG3Q9GZU2 1588 aa13.39□□□□□ -0.27
SPATA13-204ENST00000399949 P3H3Q8IVL6 736 aa13.38□□□□□ -0.27
SPATA13-204ENST00000399949 PKNOX2Q96KN3 472 aa13.37□□□□□ -0.27
SPATA13-204ENST00000399949 PAK3O75914 559 aaPredicted RBP13.36□□□□□ -0.27
SPATA13-204ENST00000399949 KANK4Q5T7N3 995 aaPredicted RBP13.36□□□□□ -0.27
SPATA13-204ENST00000399949 PLEKHG5O94827 1062 aa13.34□□□□□ -0.27
SPATA13-204ENST00000399949 RTL5Q5HYW3 569 aaPredicted RBP13.33□□□□□ -0.28
SPATA13-204ENST00000399949 NOP58Q9Y2X3 529 aaKnown RBP13.31□□□□□ -0.28
SPATA13-204ENST00000399949 VPS8Q8N3P4 1428 aa13.31□□□□□ -0.28
SPATA13-204ENST00000399949 NCAPD3P42695 1498 aa13.3□□□□□ -0.28
SPATA13-204ENST00000399949 CUX1P39880 1505 aa13.27□□□□□ -0.28
SPATA13-204ENST00000399949 KIF21BO75037 1637 aa13.26□□□□□ -0.29
SPATA13-204ENST00000399949 TOP2BQ02880 1626 aa13.25□□□□□ -0.29
SPATA13-204ENST00000399949 DDX10Q13206 875 aaKnown RBP13.25□□□□□ -0.29
SPATA13-204ENST00000399949 TIMELESSQ9UNS1 1208 aa13.25□□□□□ -0.29
SPATA13-204ENST00000399949 KIF27Q86VH2 1401 aa13.23□□□□□ -0.29
SPATA13-204ENST00000399949 CUX2O14529 1486 aa13.22□□□□□ -0.29
SPATA13-204ENST00000399949 ARAP1Q96P48 1450 aa13.2□□□□□ -0.3
SPATA13-204ENST00000399949 FAM50AQ14320 339 aaKnown RBP13.18□□□□□ -0.3
SPATA13-204ENST00000399949 NESP48681 1621 aa13.18□□□□□ -0.3
SPATA13-204ENST00000399949 CFTRP13569 1480 aa13.17□□□□□ -0.3
SPATA13-204ENST00000399949 PRXQ9BXM0 1461 aa13.17□□□□□ -0.3
SPATA13-204ENST00000399949 PODXL2Q9NZ53 605 aa13.16□□□□□ -0.3
SPATA13-204ENST00000399949 HMGXB3Q12766 1538 aa13.16□□□□□ -0.3
SPATA13-204ENST00000399949 B4GALNT3Q6L9W6 998 aa13.15□□□□□ -0.3
SPATA13-204ENST00000399949 BRPF3Q9ULD4 1205 aa13.15□□□□□ -0.3
SPATA13-204ENST00000399949 CADPSQ9ULU8 1353 aa13.14□□□□□ -0.31
SPATA13-204ENST00000399949 HIRIP3Q9BW71 556 aaPredicted RBP13.13□□□□□ -0.31
SPATA13-204ENST00000399949 ARID3CA6NKF2 412 aa13.13□□□□□ -0.31
SPATA13-204ENST00000399949 IGF1RP08069 1367 aa13.12□□□□□ -0.31
SPATA13-204ENST00000399949 BIVM-ERCC5R4GMW8 1640 aa13.12□□□□□ -0.31
SPATA13-204ENST00000399949 ERCC6Q03468 1493 aa13.11□□□□□ -0.31
SPATA13-204ENST00000399949 CARMIL1Q5VZK9 1371 aa13.11□□□□□ -0.31
SPATA13-204ENST00000399949 RAD54L2Q9Y4B4 1467 aa13.11□□□□□ -0.31
SPATA13-204ENST00000399949 FGD5Q6ZNL6 1462 aa13.11□□□□□ -0.31
SPATA13-204ENST00000399949 LAS1LQ9Y4W2 734 aaKnown RBP13.1□□□□□ -0.31
SPATA13-204ENST00000399949 ZBTB47Q9UFB7 747 aaPredicted RBP13.1□□□□□ -0.31
SPATA13-204ENST00000399949 ARHGAP35Q9NRY4 1499 aa13.09□□□□□ -0.31
SPATA13-204ENST00000399949 DHX57Q6P158 1386 aaKnown RBP13.09□□□□□ -0.31
SPATA13-204ENST00000399949 HNRNPUQ00839 825 aaKnown RBP eCLIP13.08□□□□□ -0.32
SPATA13-204ENST00000399949 SLC24A1O60721 1099 aa13.08□□□□□ -0.32
SPATA13-204ENST00000399949 ANP32AP39687 249 aaKnown RBP13.07□□□□□ -0.32
SPATA13-204ENST00000399949 VSIG10Q8N0Z9 540 aa13.07□□□□□ -0.32
SPATA13-204ENST00000399949 NEFMP07197 916 aa13.06□□□□□ -0.32
SPATA13-204ENST00000399949 FANCD2Q9BXW9 1451 aa13.05□□□□□ -0.32
SPATA13-204ENST00000399949 IPO9Q96P70 1041 aaKnown RBP13.05□□□□□ -0.32
SPATA13-204ENST00000399949 PPP4R2Q9NY27 417 aa13.05□□□□□ -0.32
SPATA13-204ENST00000399949 ERICH3Q5RHP9 1530 aa13.04□□□□□ -0.32
SPATA13-204ENST00000399949 NPM2Q86SE8 214 aaKnown RBP13.04□□□□□ -0.32
SPATA13-204ENST00000399949 ZMYND15Q9H091 742 aa13.04□□□□□ -0.32
SPATA13-204ENST00000399949 ANP32CO43423 234 aa13.04□□□□□ -0.32
SPATA13-204ENST00000399949 CCNB3Q8WWL7 1395 aa13.03□□□□□ -0.32
SPATA13-204ENST00000399949 TDRD9Q8NDG6 1382 aaKnown RBP13.03□□□□□ -0.32
SPATA13-204ENST00000399949 FHOD3Q2V2M9 1422 aa13.03□□□□□ -0.32
SPATA13-204ENST00000399949 SIN3AQ96ST3 1273 aa13.02□□□□□ -0.33
SPATA13-204ENST00000399949 WASHC2AQ641Q2 1341 aa12.97□□□□□ -0.33
SPATA13-204ENST00000399949 PHLDB1Q86UU1 1377 aa12.97□□□□□ -0.33
SPATA13-204ENST00000399949 RAB3GAP2Q9H2M9 1393 aa12.96□□□□□ -0.33
SPATA13-204ENST00000399949 GLIPR1L2Q4G1C9 344 aa12.96□□□□□ -0.33
SPATA13-204ENST00000399949 CCER2I3L3R5 266 aa12.94□□□□□ -0.34
SPATA13-204ENST00000399949 C11orf95C9JLR9 678 aaPredicted RBP12.94□□□□□ -0.34
SPATA13-204ENST00000399949 PPP1R15AO75807 674 aaPredicted RBP12.94□□□□□ -0.34
SPATA13-204ENST00000399949 A0A0U1RQG5 324 aaPredicted RBP12.93□□□□□ -0.34
SPATA13-204ENST00000399949 POLA1P09884 1462 aaPredicted RBP12.93□□□□□ -0.34
SPATA13-204ENST00000399949 RSPH6AQ9H0K4 717 aa12.92□□□□□ -0.34
SPATA13-204ENST00000399949 LAMC3Q9Y6N6 1575 aa12.92□□□□□ -0.34
SPATA13-204ENST00000399949 PDS5BQ9NTI5 1447 aa12.92□□□□□ -0.34
SPATA13-204ENST00000399949 CHIC2Q9UKJ5 165 aa12.91□□□□□ -0.34
SPATA13-204ENST00000399949 WASHC2CQ9Y4E1 1318 aa12.91□□□□□ -0.34
SPATA13-204ENST00000399949 RRBP1Q9P2E9 1410 aaKnown RBP12.91□□□□□ -0.34
SPATA13-204ENST00000399949 TOPBP1Q92547 1522 aa12.9□□□□□ -0.34
SPATA13-204ENST00000399949 KIF21AQ7Z4S6 1674 aa12.89□□□□□ -0.35
SPATA13-204ENST00000399949 LRRC9Q6ZRR7 1453 aa12.87□□□□□ -0.35
SPATA13-204ENST00000399949 GSE1Q14687 1217 aa12.87□□□□□ -0.35
SPATA13-204ENST00000399949 MTUS2Q5JR59 1369 aa12.85□□□□□ -0.35
SPATA13-204ENST00000399949 PCF11O94913 1555 aaKnown RBP12.85□□□□□ -0.35
SPATA13-204ENST00000399949 DAXXQ9UER7 740 aaPredicted RBP12.85□□□□□ -0.35
SPATA13-204ENST00000399949 TIAM1Q13009 1591 aa12.85□□□□□ -0.35
SPATA13-204ENST00000399949 FRAT1Q92837 279 aaPredicted RBP12.85□□□□□ -0.35
SPATA13-204ENST00000399949 RRP7BPQ9NSQ0 103 aa12.84□□□□□ -0.35
SPATA13-204ENST00000399949 URB2Q14146 1524 aaKnown RBP12.84□□□□□ -0.35
SPATA13-204ENST00000399949 SETD5Q9C0A6 1442 aa12.83□□□□□ -0.36
SPATA13-204ENST00000399949 FHAD1B1AJZ9 1412 aa12.83□□□□□ -0.36
SPATA13-204ENST00000399949 USP35Q9P2H5 1018 aa12.83□□□□□ -0.36
SPATA13-204ENST00000399949 FBLN2P98095 1184 aa12.82□□□□□ -0.36
SPATA13-204ENST00000399949 WDR97A6NE52 1622 aa12.81□□□□□ -0.36
SPATA13-204ENST00000399949 DNMBPQ6XZF7 1577 aa12.81□□□□□ -0.36
SPATA13-204ENST00000399949 THOC2Q8NI27 1593 aaKnown RBP12.81□□□□□ -0.36
SPATA13-204ENST00000399949 SENP3-EIF4A1A0A087X0R7 540 aa12.8□□□□□ -0.36
SPATA13-204ENST00000399949 FAM9BQ8IZU0 186 aa12.8□□□□□ -0.36
SPATA13-204ENST00000399949 PRDM2Q13029 1718 aa12.79□□□□□ -0.36
SPATA13-204ENST00000399949 ABCA10Q8WWZ4 1543 aa12.79□□□□□ -0.36
SPATA13-204ENST00000399949 AQRO60306 1485 aaKnown RBP eCLIP12.79□□□□□ -0.362e-7■■■■■ 29
SPATA13-204ENST00000399949 PPM1GO15355 546 aaPredicted RBP12.78□□□□□ -0.36
SPATA13-204ENST00000399949 CNGB1Q14028 1251 aaPredicted RBP12.78□□□□□ -0.36
SPATA13-204ENST00000399949 MRC2Q9UBG0 1479 aa12.78□□□□□ -0.36
SPATA13-204ENST00000399949 FOXD1Q16676 465 aa12.77□□□□□ -0.36
SPATA13-204ENST00000399949 GAPVD1Q14C86 1478 aa12.77□□□□□ -0.37
SPATA13-204ENST00000399949 DCAF11Q8TEB1 546 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms