RNA–Protein interactions for RNA: ENST00000399627.3

SBF1-203, Transcript of SET binding factor 1, humanhuman

TSL 5

Gene SBF1, Length 811 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBF1-203ENST00000399627 RIMBP3BA6NNM3 1639 aa30.26■■■□□ 2.44
SBF1-203ENST00000399627 RIMBP3Q9UFD9 1639 aa30.26■■■□□ 2.44
SBF1-203ENST00000399627 KIAA0586Q9BVV6 1533 aa30.19■■■□□ 2.42
SBF1-203ENST00000399627 SHROOM2Q13796 1616 aa30.18■■■□□ 2.42
SBF1-203ENST00000399627 JPH4Q96JJ6 628 aa30.11■■■□□ 2.41
SBF1-203ENST00000399627 ERCC6L2Q5T890 1561 aa30.09■■■□□ 2.41
SBF1-203ENST00000399627 IQGAP2Q13576 1575 aa30.07■■■□□ 2.4
SBF1-203ENST00000399627 CTTNBP2Q8WZ74 1663 aa30.06■■■□□ 2.4
SBF1-203ENST00000399627 KIF21BO75037 1637 aa30.05■■■□□ 2.4
SBF1-203ENST00000399627 ARAP1Q96P48 1450 aa30.05■■■□□ 2.4
SBF1-203ENST00000399627 PRG4Q92954 1404 aaPredicted RBP30.05■■■□□ 2.4
SBF1-203ENST00000399627 CYB5RLQ6IPT4 315 aa29.98■■■□□ 2.39
SBF1-203ENST00000399627 EHMT2Q96KQ7 1210 aa29.91■■■□□ 2.38
SBF1-203ENST00000399627 UGGT2Q9NYU1 1516 aa29.91■■■□□ 2.38
SBF1-203ENST00000399627 GOLGA3Q08378 1498 aa29.88■■■□□ 2.37
SBF1-203ENST00000399627 CARMIL2Q6F5E8 1435 aa29.85■■■□□ 2.37
SBF1-203ENST00000399627 DISP1Q96F81 1524 aa29.84■■■□□ 2.37
SBF1-203ENST00000399627 UBTFP17480 764 aaKnown RBP29.8■■■□□ 2.36
SBF1-203ENST00000399627 KIAA0556O60303 1618 aa29.78■■■□□ 2.36
SBF1-203ENST00000399627 TNIKQ9UKE5 1360 aa29.75■■■□□ 2.35
SBF1-203ENST00000399627 TTBK1Q5TCY1 1321 aaPredicted RBP29.71■■■□□ 2.35
SBF1-203ENST00000399627 PTPRGP23470 1445 aa29.71■■■□□ 2.35
SBF1-203ENST00000399627 RANGAP1P46060 587 aaPredicted RBP29.69■■■□□ 2.34
SBF1-203ENST00000399627 SAMD9Q5K651 1589 aa29.66■■■□□ 2.34
SBF1-203ENST00000399627 P3H3Q8IVL6 736 aa29.63■■■□□ 2.33
SBF1-203ENST00000399627 ADCY10Q96PN6 1610 aa29.58■■■□□ 2.33
SBF1-203ENST00000399627 EFCAB5A4FU69 1503 aa29.55■■■□□ 2.32
SBF1-203ENST00000399627 UACAQ9BZF9 1416 aa29.52■■■□□ 2.32
SBF1-203ENST00000399627 FHOD3Q2V2M9 1422 aa29.51■■■□□ 2.31
SBF1-203ENST00000399627 UHRF1BP1LA0JNW5 1464 aa29.48■■■□□ 2.31
SBF1-203ENST00000399627 ABCC2Q92887 1545 aa29.47■■■□□ 2.31
SBF1-203ENST00000399627 LOC105371045A0A1W2PR82 267 aa29.47■■■□□ 2.31
SBF1-203ENST00000399627 PLB1Q6P1J6 1458 aa29.47■■■□□ 2.31
SBF1-203ENST00000399627 ARHGAP35Q9NRY4 1499 aa29.46■■■□□ 2.31
SBF1-203ENST00000399627 ABCA8O94911 1581 aa29.44■■■□□ 2.3
SBF1-203ENST00000399627 NPM1P06748 294 aaKnown RBP eCLIP29.43■■■□□ 2.3
SBF1-203ENST00000399627 CLIP1P30622 1438 aa29.36■■■□□ 2.29
SBF1-203ENST00000399627 RAPGEF6Q8TEU7 1601 aa29.34■■■□□ 2.29
SBF1-203ENST00000399627 KDM5BQ9UGL1 1544 aa29.34■■■□□ 2.29
SBF1-203ENST00000399627 ZCCHC11Q5TAX3 1644 aaKnown RBP29.31■■■□□ 2.28
SBF1-203ENST00000399627 MAPKBP1O60336 1514 aa29.31■■■□□ 2.28
SBF1-203ENST00000399627 TRHP20396 242 aaPredicted RBP29.29■■■□□ 2.28
SBF1-203ENST00000399627 CEP162Q5TB80 1403 aa29.28■■■□□ 2.28
SBF1-203ENST00000399627 FMN1Q68DA7 1419 aa29.27■■■□□ 2.28
SBF1-203ENST00000399627 ARID3CA6NKF2 412 aa29.24■■■□□ 2.27
SBF1-203ENST00000399627 NUP153P49790 1475 aaKnown RBP29.22■■■□□ 2.27
SBF1-203ENST00000399627 ASXL2Q76L83 1435 aa29.21■■■□□ 2.27
SBF1-203ENST00000399627 ATP10BO94823 1461 aa29.2■■■□□ 2.26
SBF1-203ENST00000399627 KIF13AQ9H1H9 1805 aa29.18■■■□□ 2.26
SBF1-203ENST00000399627 ABCC10Q5T3U5 1492 aa29.16■■■□□ 2.26
SBF1-203ENST00000399627 DIP2BQ9P265 1576 aa29.13■■■□□ 2.25
SBF1-203ENST00000399627 HECW1Q76N89 1606 aa29.12■■■□□ 2.25
SBF1-203ENST00000399627 ATP1B4Q9UN42 357 aaPredicted RBP29.12■■■□□ 2.25
SBF1-203ENST00000399627 PCF11O94913 1555 aaKnown RBP29.1■■■□□ 2.25
SBF1-203ENST00000399627 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.1■■■□□ 2.25
SBF1-203ENST00000399627 FAM69CQ0P6D2 419 aa29.1■■■□□ 2.25
SBF1-203ENST00000399627 HNRNPUL2Q1KMD3 747 aaKnown RBP29.1■■■□□ 2.25
SBF1-203ENST00000399627 WDR7Q9Y4E6 1490 aa29.1■■■□□ 2.25
SBF1-203ENST00000399627 CASKIN1Q8WXD9 1431 aa29.08■■■□□ 2.25
SBF1-203ENST00000399627 CDK13Q14004 1512 aaKnown RBP29.06■■■□□ 2.24
SBF1-203ENST00000399627 LRRIQ1Q96JM4 1722 aa29.06■■■□□ 2.24
SBF1-203ENST00000399627 EPRSP07814 1512 aaKnown RBP29.04■■■□□ 2.24
SBF1-203ENST00000399627 FYCO1Q9BQS8 1478 aa29.02■■■□□ 2.24
SBF1-203ENST00000399627 GLI2P10070 1586 aa29.01■■■□□ 2.24
SBF1-203ENST00000399627 KCNH8Q96L42 1107 aa29■■■□□ 2.23
SBF1-203ENST00000399627 TSPOAP1O95153 1857 aa28.96■■■□□ 2.23
SBF1-203ENST00000399627 PLEKHD1A6NEE1 506 aa28.95■■■□□ 2.22
SBF1-203ENST00000399627 CCDC18Q5T9S5 1454 aa28.93■■■□□ 2.22
SBF1-203ENST00000399627 VPS8Q8N3P4 1428 aa28.91■■■□□ 2.22
SBF1-203ENST00000399627 MAP3K4Q9Y6R4 1608 aa28.9■■■□□ 2.22
SBF1-203ENST00000399627 CDK11AQ9UQ88 783 aaPredicted RBP28.87■■■□□ 2.21
SBF1-203ENST00000399627 CFAP43Q8NDM7 1665 aa28.86■■■□□ 2.21
SBF1-203ENST00000399627 PPRC1Q5VV67 1664 aaKnown RBP28.84■■■□□ 2.21
SBF1-203ENST00000399627 ABCA9Q8IUA7 1624 aa28.83■■■□□ 2.21
SBF1-203ENST00000399627 TROQ12816 1431 aaPredicted RBP28.81■■■□□ 2.2
SBF1-203ENST00000399627 CD109Q6YHK3 1445 aa28.8■■■□□ 2.2
SBF1-203ENST00000399627 MAGI3Q5TCQ9 1506 aa28.79■■■□□ 2.2
SBF1-203ENST00000399627 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.76■■■□□ 2.19
SBF1-203ENST00000399627 KIF14Q15058 1648 aa28.75■■■□□ 2.19
SBF1-203ENST00000399627 TTC37Q6PGP7 1564 aa28.74■■■□□ 2.19
SBF1-203ENST00000399627 TEX14Q8IWB6 1497 aa28.72■■■□□ 2.19
SBF1-203ENST00000399627 TIAM1Q13009 1591 aa28.69■■■□□ 2.18
SBF1-203ENST00000399627 MTUS2Q5JR59 1369 aa28.67■■■□□ 2.18
SBF1-203ENST00000399627 MYO5CQ9NQX4 1742 aa28.62■■■□□ 2.17
SBF1-203ENST00000399627 MAP3K1Q13233 1512 aa28.62■■■□□ 2.17
SBF1-203ENST00000399627 EHBP1L1Q8N3D4 1523 aa28.62■■■□□ 2.17
SBF1-203ENST00000399627 KDM6BO15054 1643 aa28.61■■■□□ 2.17
SBF1-203ENST00000399627 PLCH2O75038 1416 aa28.58■■■□□ 2.17
SBF1-203ENST00000399627 APLP2Q06481 763 aa28.56■■■□□ 2.16
SBF1-203ENST00000399627 NEO1Q92859 1461 aa28.55■■■□□ 2.16
SBF1-203ENST00000399627 LRRC9Q6ZRR7 1453 aa28.54■■■□□ 2.16
SBF1-203ENST00000399627 COL17A1Q9UMD9 1497 aaPredicted RBP28.54■■■□□ 2.16
SBF1-203ENST00000399627 FANCAO15360 1455 aa28.53■■■□□ 2.16
SBF1-203ENST00000399627 CDC42BPAQ5VT25 1732 aa28.53■■■□□ 2.16
SBF1-203ENST00000399627 ARAP3Q8WWN8 1544 aa28.53■■■□□ 2.16
SBF1-203ENST00000399627 CDC42BPBQ9Y5S2 1711 aa28.52■■■□□ 2.16
SBF1-203ENST00000399627 KANK4Q5T7N3 995 aaPredicted RBP28.52■■■□□ 2.16
SBF1-203ENST00000399627 CFAP74Q9C0B2 1584 aa28.52■■■□□ 2.16
SBF1-203ENST00000399627 PREX2Q70Z35 1606 aa28.51■■■□□ 2.15
SBF1-203ENST00000399627 SUPT6HQ7KZ85 1726 aaKnown RBP28.51■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms