RNA–Protein interactions for RNA: ENST00000399448.5

PTPN6-202, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPN6, Length 2,159 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-202ENST00000399448 EFCAB5A4FU69 1503 aa20.23■□□□□ 0.83
PTPN6-202ENST00000399448 WDR97A6NE52 1622 aa20.22■□□□□ 0.83
PTPN6-202ENST00000399448 P3H3Q8IVL6 736 aa20.19■□□□□ 0.82
PTPN6-202ENST00000399448 SCAF1Q9H7N4 1312 aaKnown RBP20.18■□□□□ 0.82
PTPN6-202ENST00000399448 CTTNBP2Q8WZ74 1663 aa20.18■□□□□ 0.82
PTPN6-202ENST00000399448 PCF11O94913 1555 aaKnown RBP20.18■□□□□ 0.82
PTPN6-202ENST00000399448 CFAP43Q8NDM7 1665 aa20.17■□□□□ 0.82
PTPN6-202ENST00000399448 AQRO60306 1485 aaKnown RBP eCLIP20.16■□□□□ 0.82
PTPN6-202ENST00000399448 FHOD3Q2V2M9 1422 aa20.16■□□□□ 0.82
PTPN6-202ENST00000399448 ABCA5Q8WWZ7 1642 aa20.16■□□□□ 0.82
PTPN6-202ENST00000399448 FYCO1Q9BQS8 1478 aa20.15■□□□□ 0.82
PTPN6-202ENST00000399448 ACIN1Q9UKV3 1341 aaKnown RBP20.15■□□□□ 0.82
PTPN6-202ENST00000399448 CASKIN1Q8WXD9 1431 aa20.15■□□□□ 0.82
PTPN6-202ENST00000399448 TDRD9Q8NDG6 1382 aaKnown RBP20.14■□□□□ 0.82
PTPN6-202ENST00000399448 GAPVD1Q14C86 1478 aa20.14■□□□□ 0.81
PTPN6-202ENST00000399448 DNAJC5BQ9UF47 199 aa20.14■□□□□ 0.81
PTPN6-202ENST00000399448 ITGAEP38570 1179 aa20.13■□□□□ 0.81
PTPN6-202ENST00000399448 PHLDB1Q86UU1 1377 aa20.13■□□□□ 0.81
PTPN6-202ENST00000399448 CENPBP07199 599 aaPredicted RBP20.11■□□□□ 0.81
PTPN6-202ENST00000399448 ATP1B4Q9UN42 357 aaPredicted RBP20.1■□□□□ 0.81
PTPN6-202ENST00000399448 FMN1Q68DA7 1419 aa20.09■□□□□ 0.81
PTPN6-202ENST00000399448 KIF21AQ7Z4S6 1674 aa20.09■□□□□ 0.81
PTPN6-202ENST00000399448 NEUROD1Q13562 356 aa20.08■□□□□ 0.81
PTPN6-202ENST00000399448 RAB3GAP2Q9H2M9 1393 aa20.07■□□□□ 0.8
PTPN6-202ENST00000399448 SETD5Q9C0A6 1442 aa20.05■□□□□ 0.8
PTPN6-202ENST00000399448 TARBP1Q13395 1621 aaKnown RBP20.04■□□□□ 0.8
PTPN6-202ENST00000399448 FAM50AQ14320 339 aaKnown RBP20.03■□□□□ 0.8
PTPN6-202ENST00000399448 SAMD9Q5K651 1589 aa20.03■□□□□ 0.8
PTPN6-202ENST00000399448 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.02■□□□□ 0.8
PTPN6-202ENST00000399448 MIER1Q8N108 512 aa20.01■□□□□ 0.79
PTPN6-202ENST00000399448 SNAPC4Q5SXM2 1469 aa20.01■□□□□ 0.79
PTPN6-202ENST00000399448 MAPKBP1O60336 1514 aa19.95■□□□□ 0.78
PTPN6-202ENST00000399448 GRIN2BQ13224 1484 aa19.93■□□□□ 0.78
PTPN6-202ENST00000399448 MRC2Q9UBG0 1479 aa19.93■□□□□ 0.78
PTPN6-202ENST00000399448 MTUS2Q5JR59 1369 aa19.92■□□□□ 0.78
PTPN6-202ENST00000399448 THOC2Q8NI27 1593 aaKnown RBP19.92■□□□□ 0.78
PTPN6-202ENST00000399448 PBRM1Q86U86 1689 aa19.91■□□□□ 0.78
PTPN6-202ENST00000399448 FGD6Q6ZV73 1430 aa19.9■□□□□ 0.78
PTPN6-202ENST00000399448 LRRIQ1Q96JM4 1722 aa19.87■□□□□ 0.77
PTPN6-202ENST00000399448 GTF3C3Q9Y5Q9 886 aa19.85■□□□□ 0.77
PTPN6-202ENST00000399448 ADAMTS12P58397 1594 aa19.85■□□□□ 0.77
PTPN6-202ENST00000399448 YTHDC1Q96MU7 727 aaKnown RBP19.83■□□□□ 0.77
PTPN6-202ENST00000399448 NCOA2Q15596 1464 aa19.83■□□□□ 0.76
PTPN6-202ENST00000399448 EHBP1L1Q8N3D4 1523 aa19.82■□□□□ 0.76
PTPN6-202ENST00000399448 IQGAP2Q13576 1575 aa19.82■□□□□ 0.76
PTPN6-202ENST00000399448 TIMELESSQ9UNS1 1208 aa19.82■□□□□ 0.76
PTPN6-202ENST00000399448 MYOM3Q5VTT5 1437 aa19.81■□□□□ 0.76
PTPN6-202ENST00000399448 SUPT6HQ7KZ85 1726 aaKnown RBP19.81■□□□□ 0.76
PTPN6-202ENST00000399448 CCDC18Q5T9S5 1454 aa19.81■□□□□ 0.76
PTPN6-202ENST00000399448 IFT140Q96RY7 1462 aa19.81■□□□□ 0.76
PTPN6-202ENST00000399448 SIN3AQ96ST3 1273 aa19.77■□□□□ 0.76
PTPN6-202ENST00000399448 WDR62O43379 1518 aa19.77■□□□□ 0.76
PTPN6-202ENST00000399448 HECW1Q76N89 1606 aa19.76■□□□□ 0.75
PTPN6-202ENST00000399448 HFM1A2PYH4 1435 aa19.76■□□□□ 0.75
PTPN6-202ENST00000399448 ARHGEF11O15085 1522 aa19.76■□□□□ 0.75
PTPN6-202ENST00000399448 UGGT2Q9NYU1 1516 aa19.76■□□□□ 0.75
PTPN6-202ENST00000399448 PTPRKQ15262 1439 aa19.75■□□□□ 0.75
PTPN6-202ENST00000399448 ZNF608Q9ULD9 1512 aaPredicted RBP19.73■□□□□ 0.75
PTPN6-202ENST00000399448 MAGI3Q5TCQ9 1506 aa19.73■□□□□ 0.75
PTPN6-202ENST00000399448 PTPN23Q9H3S7 1636 aa19.71■□□□□ 0.75
PTPN6-202ENST00000399448 EPRSP07814 1512 aaKnown RBP19.71■□□□□ 0.75
PTPN6-202ENST00000399448 UACAQ9BZF9 1416 aa19.69■□□□□ 0.74
PTPN6-202ENST00000399448 NAIPQ13075 1403 aa19.68■□□□□ 0.74
PTPN6-202ENST00000399448 KIAA0586Q9BVV6 1533 aa19.68■□□□□ 0.74
PTPN6-202ENST00000399448 TCOF1Q13428 1488 aaKnown RBP19.68■□□□□ 0.74
PTPN6-202ENST00000399448 PPP1R15AO75807 674 aaPredicted RBP19.66■□□□□ 0.74
PTPN6-202ENST00000399448 PELP1Q8IZL8 1130 aaKnown RBP19.66■□□□□ 0.74
PTPN6-202ENST00000399448 MIA2Q96PC5 1412 aa19.63■□□□□ 0.73
PTPN6-202ENST00000399448 CDK13Q14004 1512 aaKnown RBP19.62■□□□□ 0.73
PTPN6-202ENST00000399448 GRIN2AQ12879 1464 aa19.62■□□□□ 0.73
PTPN6-202ENST00000399448 DISP1Q96F81 1524 aa19.61■□□□□ 0.73
PTPN6-202ENST00000399448 EIF4G3O43432 1585 aaKnown RBP19.61■□□□□ 0.73
PTPN6-202ENST00000399448 KIAA0556O60303 1618 aa19.6■□□□□ 0.73
PTPN6-202ENST00000399448 ERCC6Q03468 1493 aa19.59■□□□□ 0.73
PTPN6-202ENST00000399448 AKNAQ7Z591 1439 aa19.58■□□□□ 0.72
PTPN6-202ENST00000399448 TONSLQ96HA7 1378 aa19.58■□□□□ 0.72
PTPN6-202ENST00000399448 MAGI1Q96QZ7 1491 aaPredicted RBP19.56■□□□□ 0.72
PTPN6-202ENST00000399448 RRP7BPQ9NSQ0 103 aa19.55■□□□□ 0.72
PTPN6-202ENST00000399448 GCC2Q8IWJ2 1684 aa19.55■□□□□ 0.72
PTPN6-202ENST00000399448 ARID3CA6NKF2 412 aa19.53■□□□□ 0.72
PTPN6-202ENST00000399448 CHIC2Q9UKJ5 165 aa19.53■□□□□ 0.72
PTPN6-202ENST00000399448 NUP153P49790 1475 aaKnown RBP19.52■□□□□ 0.72
PTPN6-202ENST00000399448 RAPGEF6Q8TEU7 1601 aa19.52■□□□□ 0.71
PTPN6-202ENST00000399448 CDK11AQ9UQ88 783 aaPredicted RBP19.51■□□□□ 0.71
PTPN6-202ENST00000399448 CHMP7Q8WUX9 453 aaPredicted RBP19.51■□□□□ 0.71
PTPN6-202ENST00000399448 SYNJ2O15056 1496 aa19.51■□□□□ 0.71
PTPN6-202ENST00000399448 DDX10Q13206 875 aaKnown RBP19.5■□□□□ 0.71
PTPN6-202ENST00000399448 CEP170Q5SW79 1584 aa19.47■□□□□ 0.71
PTPN6-202ENST00000399448 TRIM52Q96A61 297 aa19.46■□□□□ 0.71
PTPN6-202ENST00000399448 ROCK1Q13464 1354 aa19.45■□□□□ 0.7
PTPN6-202ENST00000399448 DAPK1P53355 1430 aa19.44■□□□□ 0.7
PTPN6-202ENST00000399448 KDM6BO15054 1643 aa19.43■□□□□ 0.7
PTPN6-202ENST00000399448 DENND4BO75064 1496 aaPredicted RBP19.43■□□□□ 0.7
PTPN6-202ENST00000399448 NUP160Q12769 1436 aa19.42■□□□□ 0.7
PTPN6-202ENST00000399448 MPHOSPH9Q99550 1183 aa19.42■□□□□ 0.7
PTPN6-202ENST00000399448 ABCC5O15440 1437 aa19.42■□□□□ 0.7
PTPN6-202ENST00000399448 CARMIL2Q6F5E8 1435 aa19.42■□□□□ 0.7
PTPN6-202ENST00000399448 HIRIP3Q9BW71 556 aaPredicted RBP19.42■□□□□ 0.7
PTPN6-202ENST00000399448 KDM5BQ9UGL1 1544 aa19.41■□□□□ 0.7
PTPN6-202ENST00000399448 TROQ12816 1431 aaPredicted RBP19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 182.1 ms