RNA–Protein interactions for RNA: ENST00000399448.5

PTPN6-202, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPN6, Length 2,159 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-202ENST00000399448 EFCAB5A4FU69 1503 aa20.23■□□□□ 0.83
PTPN6-202ENST00000399448 WDR97A6NE52 1622 aa20.22■□□□□ 0.83
PTPN6-202ENST00000399448 P3H3Q8IVL6 736 aa20.19■□□□□ 0.82
PTPN6-202ENST00000399448 SCAF1Q9H7N4 1312 aaKnown RBP20.18■□□□□ 0.82
PTPN6-202ENST00000399448 CTTNBP2Q8WZ74 1663 aa20.18■□□□□ 0.82
PTPN6-202ENST00000399448 PCF11O94913 1555 aaKnown RBP20.18■□□□□ 0.82
PTPN6-202ENST00000399448 CFAP43Q8NDM7 1665 aa20.17■□□□□ 0.82
PTPN6-202ENST00000399448 AQRO60306 1485 aaKnown RBP eCLIP20.16■□□□□ 0.82
PTPN6-202ENST00000399448 FHOD3Q2V2M9 1422 aa20.16■□□□□ 0.82
PTPN6-202ENST00000399448 ABCA5Q8WWZ7 1642 aa20.16■□□□□ 0.82
PTPN6-202ENST00000399448 FYCO1Q9BQS8 1478 aa20.15■□□□□ 0.82
PTPN6-202ENST00000399448 ACIN1Q9UKV3 1341 aaKnown RBP20.15■□□□□ 0.82
PTPN6-202ENST00000399448 CASKIN1Q8WXD9 1431 aa20.15■□□□□ 0.82
PTPN6-202ENST00000399448 TDRD9Q8NDG6 1382 aaKnown RBP20.14■□□□□ 0.82
PTPN6-202ENST00000399448 GAPVD1Q14C86 1478 aa20.14■□□□□ 0.81
PTPN6-202ENST00000399448 DNAJC5BQ9UF47 199 aa20.14■□□□□ 0.81
PTPN6-202ENST00000399448 ITGAEP38570 1179 aa20.13■□□□□ 0.81
PTPN6-202ENST00000399448 PHLDB1Q86UU1 1377 aa20.13■□□□□ 0.81
PTPN6-202ENST00000399448 CENPBP07199 599 aaPredicted RBP20.11■□□□□ 0.81
PTPN6-202ENST00000399448 ATP1B4Q9UN42 357 aaPredicted RBP20.1■□□□□ 0.81
PTPN6-202ENST00000399448 FMN1Q68DA7 1419 aa20.09■□□□□ 0.81
PTPN6-202ENST00000399448 KIF21AQ7Z4S6 1674 aa20.09■□□□□ 0.81
PTPN6-202ENST00000399448 NEUROD1Q13562 356 aa20.08■□□□□ 0.81
PTPN6-202ENST00000399448 RAB3GAP2Q9H2M9 1393 aa20.07■□□□□ 0.8
PTPN6-202ENST00000399448 SETD5Q9C0A6 1442 aa20.05■□□□□ 0.8
PTPN6-202ENST00000399448 TARBP1Q13395 1621 aaKnown RBP20.04■□□□□ 0.8
PTPN6-202ENST00000399448 FAM50AQ14320 339 aaKnown RBP20.03■□□□□ 0.8
PTPN6-202ENST00000399448 SAMD9Q5K651 1589 aa20.03■□□□□ 0.8
PTPN6-202ENST00000399448 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.02■□□□□ 0.8
PTPN6-202ENST00000399448 MIER1Q8N108 512 aa20.01■□□□□ 0.79
PTPN6-202ENST00000399448 SNAPC4Q5SXM2 1469 aa20.01■□□□□ 0.79
PTPN6-202ENST00000399448 MAPKBP1O60336 1514 aa19.95■□□□□ 0.78
PTPN6-202ENST00000399448 GRIN2BQ13224 1484 aa19.93■□□□□ 0.78
PTPN6-202ENST00000399448 MRC2Q9UBG0 1479 aa19.93■□□□□ 0.78
PTPN6-202ENST00000399448 MTUS2Q5JR59 1369 aa19.92■□□□□ 0.78
PTPN6-202ENST00000399448 THOC2Q8NI27 1593 aaKnown RBP19.92■□□□□ 0.78
PTPN6-202ENST00000399448 PBRM1Q86U86 1689 aa19.91■□□□□ 0.78
PTPN6-202ENST00000399448 FGD6Q6ZV73 1430 aa19.9■□□□□ 0.78
PTPN6-202ENST00000399448 LRRIQ1Q96JM4 1722 aa19.87■□□□□ 0.77
PTPN6-202ENST00000399448 GTF3C3Q9Y5Q9 886 aa19.85■□□□□ 0.77
PTPN6-202ENST00000399448 ADAMTS12P58397 1594 aa19.85■□□□□ 0.77
PTPN6-202ENST00000399448 YTHDC1Q96MU7 727 aaKnown RBP19.83■□□□□ 0.77
PTPN6-202ENST00000399448 NCOA2Q15596 1464 aa19.83■□□□□ 0.76
PTPN6-202ENST00000399448 EHBP1L1Q8N3D4 1523 aa19.82■□□□□ 0.76
PTPN6-202ENST00000399448 IQGAP2Q13576 1575 aa19.82■□□□□ 0.76
PTPN6-202ENST00000399448 TIMELESSQ9UNS1 1208 aa19.82■□□□□ 0.76
PTPN6-202ENST00000399448 MYOM3Q5VTT5 1437 aa19.81■□□□□ 0.76
PTPN6-202ENST00000399448 SUPT6HQ7KZ85 1726 aaKnown RBP19.81■□□□□ 0.76
PTPN6-202ENST00000399448 CCDC18Q5T9S5 1454 aa19.81■□□□□ 0.76
PTPN6-202ENST00000399448 IFT140Q96RY7 1462 aa19.81■□□□□ 0.76
PTPN6-202ENST00000399448 SIN3AQ96ST3 1273 aa19.77■□□□□ 0.76
PTPN6-202ENST00000399448 WDR62O43379 1518 aa19.77■□□□□ 0.76
PTPN6-202ENST00000399448 HECW1Q76N89 1606 aa19.76■□□□□ 0.75
PTPN6-202ENST00000399448 HFM1A2PYH4 1435 aa19.76■□□□□ 0.75
PTPN6-202ENST00000399448 ARHGEF11O15085 1522 aa19.76■□□□□ 0.75
PTPN6-202ENST00000399448 UGGT2Q9NYU1 1516 aa19.76■□□□□ 0.75
PTPN6-202ENST00000399448 PTPRKQ15262 1439 aa19.75■□□□□ 0.75
PTPN6-202ENST00000399448 ZNF608Q9ULD9 1512 aaPredicted RBP19.73■□□□□ 0.75
PTPN6-202ENST00000399448 MAGI3Q5TCQ9 1506 aa19.73■□□□□ 0.75
PTPN6-202ENST00000399448 PTPN23Q9H3S7 1636 aa19.71■□□□□ 0.75
PTPN6-202ENST00000399448 EPRSP07814 1512 aaKnown RBP19.71■□□□□ 0.75
PTPN6-202ENST00000399448 UACAQ9BZF9 1416 aa19.69■□□□□ 0.74
PTPN6-202ENST00000399448 NAIPQ13075 1403 aa19.68■□□□□ 0.74
PTPN6-202ENST00000399448 KIAA0586Q9BVV6 1533 aa19.68■□□□□ 0.74
PTPN6-202ENST00000399448 TCOF1Q13428 1488 aaKnown RBP19.68■□□□□ 0.74
PTPN6-202ENST00000399448 PPP1R15AO75807 674 aaPredicted RBP19.66■□□□□ 0.74
PTPN6-202ENST00000399448 PELP1Q8IZL8 1130 aaKnown RBP19.66■□□□□ 0.74
PTPN6-202ENST00000399448 MIA2Q96PC5 1412 aa19.63■□□□□ 0.73
PTPN6-202ENST00000399448 CDK13Q14004 1512 aaKnown RBP19.62■□□□□ 0.73
PTPN6-202ENST00000399448 GRIN2AQ12879 1464 aa19.62■□□□□ 0.73
PTPN6-202ENST00000399448 DISP1Q96F81 1524 aa19.61■□□□□ 0.73
PTPN6-202ENST00000399448 EIF4G3O43432 1585 aaKnown RBP19.61■□□□□ 0.73
PTPN6-202ENST00000399448 KIAA0556O60303 1618 aa19.6■□□□□ 0.73
PTPN6-202ENST00000399448 ERCC6Q03468 1493 aa19.59■□□□□ 0.73
PTPN6-202ENST00000399448 AKNAQ7Z591 1439 aa19.58■□□□□ 0.72
PTPN6-202ENST00000399448 TONSLQ96HA7 1378 aa19.58■□□□□ 0.72
PTPN6-202ENST00000399448 MAGI1Q96QZ7 1491 aaPredicted RBP19.56■□□□□ 0.72
PTPN6-202ENST00000399448 RRP7BPQ9NSQ0 103 aa19.55■□□□□ 0.72
PTPN6-202ENST00000399448 GCC2Q8IWJ2 1684 aa19.55■□□□□ 0.72
PTPN6-202ENST00000399448 ARID3CA6NKF2 412 aa19.53■□□□□ 0.72
PTPN6-202ENST00000399448 CHIC2Q9UKJ5 165 aa19.53■□□□□ 0.72
PTPN6-202ENST00000399448 NUP153P49790 1475 aaKnown RBP19.52■□□□□ 0.72
PTPN6-202ENST00000399448 RAPGEF6Q8TEU7 1601 aa19.52■□□□□ 0.71
PTPN6-202ENST00000399448 CDK11AQ9UQ88 783 aaPredicted RBP19.51■□□□□ 0.71
PTPN6-202ENST00000399448 CHMP7Q8WUX9 453 aaPredicted RBP19.51■□□□□ 0.71
PTPN6-202ENST00000399448 SYNJ2O15056 1496 aa19.51■□□□□ 0.71
PTPN6-202ENST00000399448 DDX10Q13206 875 aaKnown RBP19.5■□□□□ 0.71
PTPN6-202ENST00000399448 CEP170Q5SW79 1584 aa19.47■□□□□ 0.71
PTPN6-202ENST00000399448 TRIM52Q96A61 297 aa19.46■□□□□ 0.71
PTPN6-202ENST00000399448 ROCK1Q13464 1354 aa19.45■□□□□ 0.7
PTPN6-202ENST00000399448 DAPK1P53355 1430 aa19.44■□□□□ 0.7
PTPN6-202ENST00000399448 KDM6BO15054 1643 aa19.43■□□□□ 0.7
PTPN6-202ENST00000399448 DENND4BO75064 1496 aaPredicted RBP19.43■□□□□ 0.7
PTPN6-202ENST00000399448 NUP160Q12769 1436 aa19.42■□□□□ 0.7
PTPN6-202ENST00000399448 MPHOSPH9Q99550 1183 aa19.42■□□□□ 0.7
PTPN6-202ENST00000399448 ABCC5O15440 1437 aa19.42■□□□□ 0.7
PTPN6-202ENST00000399448 CARMIL2Q6F5E8 1435 aa19.42■□□□□ 0.7
PTPN6-202ENST00000399448 HIRIP3Q9BW71 556 aaPredicted RBP19.42■□□□□ 0.7
PTPN6-202ENST00000399448 KDM5BQ9UGL1 1544 aa19.41■□□□□ 0.7
PTPN6-202ENST00000399448 TROQ12816 1431 aaPredicted RBP19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms