RNA–Protein interactions for RNA: ENST00000399264.1

CCDC144A-205, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 2

Gene CCDC144A, Length 2,815 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-205ENST00000399264 PHLDB1Q86UU1 1377 aa21.23■□□□□ 0.99
CCDC144A-205ENST00000399264 FAM50AQ14320 339 aaKnown RBP21.22■□□□□ 0.99
CCDC144A-205ENST00000399264 TIAM1Q13009 1591 aa21.22■□□□□ 0.99
CCDC144A-205ENST00000399264 FHOD3Q2V2M9 1422 aa21.18■□□□□ 0.98
CCDC144A-205ENST00000399264 LRRC9Q6ZRR7 1453 aa21.18■□□□□ 0.98
CCDC144A-205ENST00000399264 DNAJC5BQ9UF47 199 aa21.15■□□□□ 0.98
CCDC144A-205ENST00000399264 SIN3AQ96ST3 1273 aa21.15■□□□□ 0.98
CCDC144A-205ENST00000399264 POLA1P09884 1462 aaPredicted RBP21.14■□□□□ 0.97
CCDC144A-205ENST00000399264 MAPKBP1O60336 1514 aa21.12■□□□□ 0.97
CCDC144A-205ENST00000399264 PCF11O94913 1555 aaKnown RBP21.11■□□□□ 0.97
CCDC144A-205ENST00000399264 TOPBP1Q92547 1522 aa21.11■□□□□ 0.97
CCDC144A-205ENST00000399264 SETD5Q9C0A6 1442 aa21.08■□□□□ 0.97
CCDC144A-205ENST00000399264 KCNH8Q96L42 1107 aa21.07■□□□□ 0.96
CCDC144A-205ENST00000399264 MAP3K1Q13233 1512 aa21.06■□□□□ 0.96
CCDC144A-205ENST00000399264 DNMBPQ6XZF7 1577 aa21.06■□□□□ 0.96
CCDC144A-205ENST00000399264 FHAD1B1AJZ9 1412 aa21.06■□□□□ 0.96
CCDC144A-205ENST00000399264 ABCA10Q8WWZ4 1543 aa21.06■□□□□ 0.96
CCDC144A-205ENST00000399264 TDRD9Q8NDG6 1382 aaKnown RBP21.05■□□□□ 0.96
CCDC144A-205ENST00000399264 HIRIP3Q9BW71 556 aaPredicted RBP21.02■□□□□ 0.96
CCDC144A-205ENST00000399264 URB2Q14146 1524 aaKnown RBP20.98■□□□□ 0.95
CCDC144A-205ENST00000399264 CFAP43Q8NDM7 1665 aa20.97■□□□□ 0.95
CCDC144A-205ENST00000399264 WDR97A6NE52 1622 aa20.96■□□□□ 0.95
CCDC144A-205ENST00000399264 CASKIN1Q8WXD9 1431 aa20.94■□□□□ 0.94
CCDC144A-205ENST00000399264 DDX10Q13206 875 aaKnown RBP20.93■□□□□ 0.94
CCDC144A-205ENST00000399264 FYCO1Q9BQS8 1478 aa20.92■□□□□ 0.94
CCDC144A-205ENST00000399264 PTPRKQ15262 1439 aa20.87■□□□□ 0.93
CCDC144A-205ENST00000399264 CTTNBP2Q8WZ74 1663 aa20.87■□□□□ 0.93
CCDC144A-205ENST00000399264 EFCAB5A4FU69 1503 aa20.87■□□□□ 0.93
CCDC144A-205ENST00000399264 CUL7Q14999 1698 aa20.86■□□□□ 0.93
CCDC144A-205ENST00000399264 MTUS2Q5JR59 1369 aa20.86■□□□□ 0.93
CCDC144A-205ENST00000399264 SNAPC4Q5SXM2 1469 aa20.86■□□□□ 0.93
CCDC144A-205ENST00000399264 FGD6Q6ZV73 1430 aa20.85■□□□□ 0.93
CCDC144A-205ENST00000399264 GAPVD1Q14C86 1478 aa20.83■□□□□ 0.93
CCDC144A-205ENST00000399264 FMN1Q68DA7 1419 aa20.83■□□□□ 0.92
CCDC144A-205ENST00000399264 ARID3CA6NKF2 412 aa20.82■□□□□ 0.92
CCDC144A-205ENST00000399264 SUPT16HQ9Y5B9 1047 aaKnown RBP20.82■□□□□ 0.92
CCDC144A-205ENST00000399264 AQRO60306 1485 aaKnown RBP eCLIP20.82■□□□□ 0.92
CCDC144A-205ENST00000399264 PPP1R15AO75807 674 aaPredicted RBP20.81■□□□□ 0.92
CCDC144A-205ENST00000399264 LRRIQ1Q96JM4 1722 aa20.81■□□□□ 0.92
CCDC144A-205ENST00000399264 LAMC3Q9Y6N6 1575 aa20.78■□□□□ 0.92
CCDC144A-205ENST00000399264 ABCA5Q8WWZ7 1642 aa20.77■□□□□ 0.92
CCDC144A-205ENST00000399264 CHIC2Q9UKJ5 165 aa20.76■□□□□ 0.91
CCDC144A-205ENST00000399264 NCOA2Q15596 1464 aa20.75■□□□□ 0.91
CCDC144A-205ENST00000399264 CCDC18Q5T9S5 1454 aa20.74■□□□□ 0.91
CCDC144A-205ENST00000399264 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.73■□□□□ 0.91
CCDC144A-205ENST00000399264 KIF21AQ7Z4S6 1674 aa20.73■□□□□ 0.91
CCDC144A-205ENST00000399264 RRP7BPQ9NSQ0 103 aa20.73■□□□□ 0.91
CCDC144A-205ENST00000399264 SAMD9Q5K651 1589 aa20.73■□□□□ 0.91
CCDC144A-205ENST00000399264 PDS5BQ9NTI5 1447 aa20.72■□□□□ 0.91
CCDC144A-205ENST00000399264 GRIN2BQ13224 1484 aa20.72■□□□□ 0.91
CCDC144A-205ENST00000399264 MAGI3Q5TCQ9 1506 aa20.7■□□□□ 0.9
CCDC144A-205ENST00000399264 NAIPQ13075 1403 aa20.68■□□□□ 0.9
CCDC144A-205ENST00000399264 MYOM3Q5VTT5 1437 aa20.68■□□□□ 0.9
CCDC144A-205ENST00000399264 HFM1A2PYH4 1435 aa20.68■□□□□ 0.9
CCDC144A-205ENST00000399264 TONSLQ96HA7 1378 aa20.67■□□□□ 0.9
CCDC144A-205ENST00000399264 TIMELESSQ9UNS1 1208 aa20.67■□□□□ 0.9
CCDC144A-205ENST00000399264 PTPN23Q9H3S7 1636 aa20.66■□□□□ 0.9
CCDC144A-205ENST00000399264 TARBP1Q13395 1621 aaKnown RBP20.64■□□□□ 0.89
CCDC144A-205ENST00000399264 UACAQ9BZF9 1416 aa20.64■□□□□ 0.89
CCDC144A-205ENST00000399264 BCANQ96GW7 911 aa20.63■□□□□ 0.89
CCDC144A-205ENST00000399264 TRIM52Q96A61 297 aa20.63■□□□□ 0.89
CCDC144A-205ENST00000399264 FOXD1Q16676 465 aa20.59■□□□□ 0.89
CCDC144A-205ENST00000399264 SUPT6HQ7KZ85 1726 aaKnown RBP20.59■□□□□ 0.89
CCDC144A-205ENST00000399264 CDK13Q14004 1512 aaKnown RBP20.58■□□□□ 0.89
CCDC144A-205ENST00000399264 UGGT2Q9NYU1 1516 aa20.57■□□□□ 0.88
CCDC144A-205ENST00000399264 EHBP1L1Q8N3D4 1523 aa20.56■□□□□ 0.88
CCDC144A-205ENST00000399264 ANP32CO43423 234 aa20.55■□□□□ 0.88
CCDC144A-205ENST00000399264 KDM6BO15054 1643 aa20.55■□□□□ 0.88
CCDC144A-205ENST00000399264 DENND4BO75064 1496 aaPredicted RBP20.53■□□□□ 0.88
CCDC144A-205ENST00000399264 ARHGEF11O15085 1522 aa20.52■□□□□ 0.88
CCDC144A-205ENST00000399264 FKBP8Q14318 412 aa20.52■□□□□ 0.88
CCDC144A-205ENST00000399264 EPRSP07814 1512 aaKnown RBP20.52■□□□□ 0.88
CCDC144A-205ENST00000399264 KDM5BQ9UGL1 1544 aa20.52■□□□□ 0.88
CCDC144A-205ENST00000399264 ZNF608Q9ULD9 1512 aaPredicted RBP20.52■□□□□ 0.87
CCDC144A-205ENST00000399264 PBRM1Q86U86 1689 aa20.51■□□□□ 0.87
CCDC144A-205ENST00000399264 ZNF644Q9H582 1327 aaPredicted RBP20.5■□□□□ 0.87
CCDC144A-205ENST00000399264 IQGAP2Q13576 1575 aa20.5■□□□□ 0.87
CCDC144A-205ENST00000399264 THOC2Q8NI27 1593 aaKnown RBP20.49■□□□□ 0.87
CCDC144A-205ENST00000399264 TSHZ2Q9NRE2 1034 aa20.47■□□□□ 0.87
CCDC144A-205ENST00000399264 MPHOSPH9Q99550 1183 aa20.46■□□□□ 0.87
CCDC144A-205ENST00000399264 CCER2I3L3R5 266 aa20.45■□□□□ 0.86
CCDC144A-205ENST00000399264 HSPA5P11021 654 aaKnown RBP20.45■□□□□ 0.86
CCDC144A-205ENST00000399264 ADAMTS12P58397 1594 aa20.45■□□□□ 0.86
CCDC144A-205ENST00000399264 HECW1Q76N89 1606 aa20.44■□□□□ 0.86
CCDC144A-205ENST00000399264 TCOF1Q13428 1488 aaKnown RBP20.43■□□□□ 0.86
CCDC144A-205ENST00000399264 WASHC2AQ641Q2 1341 aa20.43■□□□□ 0.86
CCDC144A-205ENST00000399264 L3MBTL2Q969R5 705 aa20.42■□□□□ 0.86
CCDC144A-205ENST00000399264 WDR62O43379 1518 aa20.41■□□□□ 0.86
CCDC144A-205ENST00000399264 MRC2Q9UBG0 1479 aa20.4■□□□□ 0.86
CCDC144A-205ENST00000399264 C11orf95C9JLR9 678 aaPredicted RBP20.39■□□□□ 0.85
CCDC144A-205ENST00000399264 CCDC184Q52MB2 194 aa20.35■□□□□ 0.85
CCDC144A-205ENST00000399264 GCC2Q8IWJ2 1684 aa20.35■□□□□ 0.85
CCDC144A-205ENST00000399264 DISP1Q96F81 1524 aa20.35■□□□□ 0.85
CCDC144A-205ENST00000399264 NBPF8Q3BBV2 869 aa20.34■□□□□ 0.85
CCDC144A-205ENST00000399264 MIA2Q96PC5 1412 aa20.34■□□□□ 0.85
CCDC144A-205ENST00000399264 FBLN2P98095 1184 aa20.33■□□□□ 0.85
CCDC144A-205ENST00000399264 NUP153P49790 1475 aaKnown RBP20.32■□□□□ 0.84
CCDC144A-205ENST00000399264 ABCC5O15440 1437 aa20.32■□□□□ 0.84
CCDC144A-205ENST00000399264 EIF4G2P78344 907 aaKnown RBP eCLIP20.31■□□□□ 0.84
CCDC144A-205ENST00000399264 HNRNPUQ00839 825 aaKnown RBP eCLIP20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms