RNA–Protein interactions for RNA: ENST00000398661.6

HMGCLL1-205, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 2 BASIC

Gene HMGCLL1, Length 2,532 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-205ENST00000398661 TNIKQ9UKE5 1360 aa15.18■□□□□ 0.02
HMGCLL1-205ENST00000398661 KIF21BO75037 1637 aa15.14■□□□□ 0.01
HMGCLL1-205ENST00000398661 IFT140Q96RY7 1462 aa15.14■□□□□ 0.01
HMGCLL1-205ENST00000398661 WDR97A6NE52 1622 aa15.14■□□□□ 0.01
HMGCLL1-205ENST00000398661 ABCA5Q8WWZ7 1642 aa15.12■□□□□ 0.01
HMGCLL1-205ENST00000398661 CLIP1P30622 1438 aa15.12■□□□□ 0.01
HMGCLL1-205ENST00000398661 CHMP7Q8WUX9 453 aaPredicted RBP15.1■□□□□ 0.01
HMGCLL1-205ENST00000398661 EIF4G3O43432 1585 aaKnown RBP15.1■□□□□ 0.01
HMGCLL1-205ENST00000398661 SNAPC4Q5SXM2 1469 aa15.09■□□□□ 0.01
HMGCLL1-205ENST00000398661 YTHDC1Q96MU7 727 aaKnown RBP15.09■□□□□ 0.01
HMGCLL1-205ENST00000398661 ATP1B4Q9UN42 357 aaPredicted RBP15.08■□□□□ 0.01
HMGCLL1-205ENST00000398661 GRIN2BQ13224 1484 aa15.06■□□□□ 0
HMGCLL1-205ENST00000398661 ZNF316A6NFI3 1004 aaPredicted RBP15.05■□□□□ 0
HMGCLL1-205ENST00000398661 ARID3CA6NKF2 412 aa15.05■□□□□ 0
HMGCLL1-205ENST00000398661 ERICH3Q5RHP9 1530 aa15.04■□□□□ -0
HMGCLL1-205ENST00000398661 BCL11AQ9H165 835 aa15.04■□□□□ -0
HMGCLL1-205ENST00000398661 PBRM1Q86U86 1689 aa15.03■□□□□ -0
HMGCLL1-205ENST00000398661 ARAP1Q96P48 1450 aa15.01□□□□□ -0.01
HMGCLL1-205ENST00000398661 FHAD1B1AJZ9 1412 aa14.99□□□□□ -0.01
HMGCLL1-205ENST00000398661 ARHGAP35Q9NRY4 1499 aa14.98□□□□□ -0.01
HMGCLL1-205ENST00000398661 FHOD3Q2V2M9 1422 aa14.98□□□□□ -0.01
HMGCLL1-205ENST00000398661 ANP32EQ9BTT0 268 aa14.97□□□□□ -0.01
HMGCLL1-205ENST00000398661 ADAMTS12P58397 1594 aa14.96□□□□□ -0.02
HMGCLL1-205ENST00000398661 CUL7Q14999 1698 aa14.95□□□□□ -0.02
HMGCLL1-205ENST00000398661 MIER1Q8N108 512 aa14.95□□□□□ -0.02
HMGCLL1-205ENST00000398661 KANK4Q5T7N3 995 aaPredicted RBP14.92□□□□□ -0.02
HMGCLL1-205ENST00000398661 GRIN2AQ12879 1464 aa14.92□□□□□ -0.02
HMGCLL1-205ENST00000398661 SYNJ2O15056 1496 aa14.89□□□□□ -0.03
HMGCLL1-205ENST00000398661 VPS8Q8N3P4 1428 aa14.88□□□□□ -0.03
HMGCLL1-205ENST00000398661 MAGI1Q96QZ7 1491 aaPredicted RBP14.87□□□□□ -0.03
HMGCLL1-205ENST00000398661 APLP2Q06481 763 aa14.87□□□□□ -0.03
HMGCLL1-205ENST00000398661 CLSPNQ9HAW4 1339 aa14.86□□□□□ -0.03
HMGCLL1-205ENST00000398661 JPH4Q96JJ6 628 aa14.86□□□□□ -0.03
HMGCLL1-205ENST00000398661 CEP170Q5SW79 1584 aa14.86□□□□□ -0.03
HMGCLL1-205ENST00000398661 SUPT16HQ9Y5B9 1047 aaKnown RBP14.83□□□□□ -0.04
HMGCLL1-205ENST00000398661 CTTNBP2Q8WZ74 1663 aa14.83□□□□□ -0.04
HMGCLL1-205ENST00000398661 TSHZ2Q9NRE2 1034 aa14.83□□□□□ -0.04
HMGCLL1-205ENST00000398661 IQGAP2Q13576 1575 aa14.8□□□□□ -0.04
HMGCLL1-205ENST00000398661 CHD1O14646 1710 aa14.79□□□□□ -0.04
HMGCLL1-205ENST00000398661 KIAA0586Q9BVV6 1533 aa14.78□□□□□ -0.04
HMGCLL1-205ENST00000398661 HNRNPUL2Q1KMD3 747 aaKnown RBP14.77□□□□□ -0.04
HMGCLL1-205ENST00000398661 NUP160Q12769 1436 aa14.75□□□□□ -0.05
HMGCLL1-205ENST00000398661 DISP1Q96F81 1524 aa14.75□□□□□ -0.05
HMGCLL1-205ENST00000398661 ITGAEP38570 1179 aa14.73□□□□□ -0.05
HMGCLL1-205ENST00000398661 PCF11O94913 1555 aaKnown RBP14.73□□□□□ -0.05
HMGCLL1-205ENST00000398661 ERCC6L2Q5T890 1561 aa14.73□□□□□ -0.05
HMGCLL1-205ENST00000398661 PRG4Q92954 1404 aaPredicted RBP14.72□□□□□ -0.05
HMGCLL1-205ENST00000398661 PLB1Q6P1J6 1458 aa14.7□□□□□ -0.06
HMGCLL1-205ENST00000398661 SAMD9Q5K651 1589 aa14.69□□□□□ -0.06
HMGCLL1-205ENST00000398661 OSCARQ8IYS5 282 aa14.66□□□□□ -0.06
HMGCLL1-205ENST00000398661 EFCAB5A4FU69 1503 aa14.66□□□□□ -0.06
HMGCLL1-205ENST00000398661 CDK13Q14004 1512 aaKnown RBP14.66□□□□□ -0.06
HMGCLL1-205ENST00000398661 UGGT2Q9NYU1 1516 aa14.66□□□□□ -0.06
HMGCLL1-205ENST00000398661 FMN1Q68DA7 1419 aa14.65□□□□□ -0.06
HMGCLL1-205ENST00000398661 KIAA0556O60303 1618 aa14.65□□□□□ -0.06
HMGCLL1-205ENST00000398661 CASKIN1Q8WXD9 1431 aa14.63□□□□□ -0.07
HMGCLL1-205ENST00000398661 LRRIQ1Q96JM4 1722 aa14.61□□□□□ -0.07
HMGCLL1-205ENST00000398661 CARMIL2Q6F5E8 1435 aa14.61□□□□□ -0.07
HMGCLL1-205ENST00000398661 MTUS2Q5JR59 1369 aa14.6□□□□□ -0.07
HMGCLL1-205ENST00000398661 FAM50AQ14320 339 aaKnown RBP14.6□□□□□ -0.07
HMGCLL1-205ENST00000398661 PTPRGP23470 1445 aa14.6□□□□□ -0.07
HMGCLL1-205ENST00000398661 PHLDB1Q86UU1 1377 aa14.59□□□□□ -0.07
HMGCLL1-205ENST00000398661 TIAM1Q13009 1591 aa14.59□□□□□ -0.07
HMGCLL1-205ENST00000398661 LRRC9Q6ZRR7 1453 aa14.58□□□□□ -0.08
HMGCLL1-205ENST00000398661 FYCO1Q9BQS8 1478 aa14.58□□□□□ -0.08
HMGCLL1-205ENST00000398661 MAGI3Q5TCQ9 1506 aa14.57□□□□□ -0.08
HMGCLL1-205ENST00000398661 NUP153P49790 1475 aaKnown RBP14.57□□□□□ -0.08
HMGCLL1-205ENST00000398661 EPRSP07814 1512 aaKnown RBP14.55□□□□□ -0.08
HMGCLL1-205ENST00000398661 KCNH8Q96L42 1107 aa14.55□□□□□ -0.08
HMGCLL1-205ENST00000398661 PRKCSHP14314 528 aaPredicted RBP14.53□□□□□ -0.08
HMGCLL1-205ENST00000398661 CLASP1Q7Z460 1538 aa14.53□□□□□ -0.08
HMGCLL1-205ENST00000398661 CYB5RLQ6IPT4 315 aa14.52□□□□□ -0.09
HMGCLL1-205ENST00000398661 ZNF644Q9H582 1327 aaPredicted RBP14.5□□□□□ -0.09
HMGCLL1-205ENST00000398661 ZNF777Q9ULD5 760 aaPredicted RBP14.5□□□□□ -0.09
HMGCLL1-205ENST00000398661 RAPGEF6Q8TEU7 1601 aa14.49□□□□□ -0.09
HMGCLL1-205ENST00000398661 CHIC2Q9UKJ5 165 aa14.47□□□□□ -0.09
HMGCLL1-205ENST00000398661 ATP10BO94823 1461 aa14.47□□□□□ -0.09
HMGCLL1-205ENST00000398661 SHROOM2Q13796 1616 aa14.46□□□□□ -0.09
HMGCLL1-205ENST00000398661 CCNB3Q8WWL7 1395 aa14.46□□□□□ -0.09
HMGCLL1-205ENST00000398661 HECW1Q76N89 1606 aa14.46□□□□□ -0.1
HMGCLL1-205ENST00000398661 NCOA2Q15596 1464 aa14.45□□□□□ -0.1
HMGCLL1-205ENST00000398661 PLEKHD1A6NEE1 506 aa14.45□□□□□ -0.1
HMGCLL1-205ENST00000398661 RBM19Q9Y4C8 960 aaKnown RBP14.45□□□□□ -0.1
HMGCLL1-205ENST00000398661 CFAP43Q8NDM7 1665 aa14.45□□□□□ -0.1
HMGCLL1-205ENST00000398661 UACAQ9BZF9 1416 aa14.44□□□□□ -0.1
HMGCLL1-205ENST00000398661 BCANQ96GW7 911 aa14.44□□□□□ -0.1
HMGCLL1-205ENST00000398661 ABCA8O94911 1581 aa14.42□□□□□ -0.1
HMGCLL1-205ENST00000398661 CDK11AQ9UQ88 783 aaPredicted RBP14.41□□□□□ -0.1
HMGCLL1-205ENST00000398661 CCDC18Q5T9S5 1454 aa14.4□□□□□ -0.11
HMGCLL1-205ENST00000398661 MAP3K1Q13233 1512 aa14.39□□□□□ -0.11
HMGCLL1-205ENST00000398661 KIF14Q15058 1648 aa14.39□□□□□ -0.11
HMGCLL1-205ENST00000398661 FKBP8Q14318 412 aa14.39□□□□□ -0.11
HMGCLL1-205ENST00000398661 RRBP1Q9P2E9 1410 aaKnown RBP14.38□□□□□ -0.11
HMGCLL1-205ENST00000398661 FGD6Q6ZV73 1430 aa14.37□□□□□ -0.11
HMGCLL1-205ENST00000398661 RRP7BPQ9NSQ0 103 aa14.37□□□□□ -0.11
HMGCLL1-205ENST00000398661 ARHGEF11O15085 1522 aa14.36□□□□□ -0.11
HMGCLL1-205ENST00000398661 CFDP1Q9UEE9 299 aaPredicted RBP14.36□□□□□ -0.11
HMGCLL1-205ENST00000398661 PTPRKQ15262 1439 aa14.35□□□□□ -0.11
HMGCLL1-205ENST00000398661 TROQ12816 1431 aaPredicted RBP14.34□□□□□ -0.11
HMGCLL1-205ENST00000398661 EHBP1L1Q8N3D4 1523 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms