RNA–Protein interactions for RNA: ENST00000398185.6

PCSK6-202, Transcript of proprotein convertase subtilisin/kexin type 6, humanhuman

TSL 1 (best)

Gene PCSK6, Length 3,723 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK6-202ENST00000398185 PLEKHD1A6NEE1 506 aa13.78□□□□□ -0.2
PCSK6-202ENST00000398185 CHIC2Q9UKJ5 165 aa13.77□□□□□ -0.2
PCSK6-202ENST00000398185 CDK11AQ9UQ88 783 aaPredicted RBP13.77□□□□□ -0.21
PCSK6-202ENST00000398185 CCER1Q8TC90 406 aaPredicted RBP13.76□□□□□ -0.21
PCSK6-202ENST00000398185 IGF1RP08069 1367 aa13.74□□□□□ -0.21
PCSK6-202ENST00000398185 FAM69CQ0P6D2 419 aa13.74□□□□□ -0.21
PCSK6-202ENST00000398185 SNAPC4Q5SXM2 1469 aa13.73□□□□□ -0.21
PCSK6-202ENST00000398185 HRCP23327 699 aa13.71□□□□□ -0.21
PCSK6-202ENST00000398185 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.7□□□□□ -0.221e-6■□□□□ 11
PCSK6-202ENST00000398185 KIF21AQ7Z4S6 1674 aa13.7□□□□□ -0.22
PCSK6-202ENST00000398185 IFT140Q96RY7 1462 aa13.7□□□□□ -0.22
PCSK6-202ENST00000398185 ESF1Q9H501 851 aaKnown RBP13.69□□□□□ -0.22
PCSK6-202ENST00000398185 TRIM52Q96A61 297 aa13.67□□□□□ -0.22
PCSK6-202ENST00000398185 BIVM-ERCC5R4GMW8 1640 aa13.66□□□□□ -0.22
PCSK6-202ENST00000398185 GRIN2BQ13224 1484 aa13.66□□□□□ -0.22
PCSK6-202ENST00000398185 DNMBPQ6XZF7 1577 aa13.66□□□□□ -0.22
PCSK6-202ENST00000398185 DNAJC5Q9H3Z4 198 aa13.65□□□□□ -0.22
PCSK6-202ENST00000398185 PTPRGP23470 1445 aa13.65□□□□□ -0.22
PCSK6-202ENST00000398185 BCANQ96GW7 911 aa13.63□□□□□ -0.23
PCSK6-202ENST00000398185 MTUS2Q5JR59 1369 aa13.63□□□□□ -0.23
PCSK6-202ENST00000398185 FHOD3Q2V2M9 1422 aa13.62□□□□□ -0.23
PCSK6-202ENST00000398185 CARMIL2Q6F5E8 1435 aa13.62□□□□□ -0.23
PCSK6-202ENST00000398185 PRG4Q92954 1404 aaPredicted RBP13.62□□□□□ -0.23
PCSK6-202ENST00000398185 PRXQ9BXM0 1461 aa13.62□□□□□ -0.23
PCSK6-202ENST00000398185 KIF21BO75037 1637 aa13.61□□□□□ -0.23
PCSK6-202ENST00000398185 VPS8Q8N3P4 1428 aa13.6□□□□□ -0.23
PCSK6-202ENST00000398185 CHGAP10645 457 aaKnown RBP13.6□□□□□ -0.23
PCSK6-202ENST00000398185 ZEB1P37275 1124 aaPredicted RBP13.59□□□□□ -0.23
PCSK6-202ENST00000398185 CFDP1Q9UEE9 299 aaPredicted RBP13.57□□□□□ -0.24
PCSK6-202ENST00000398185 AEBP2Q6ZN18 517 aaPredicted RBP13.56□□□□□ -0.24
PCSK6-202ENST00000398185 ABCA10Q8WWZ4 1543 aa13.55□□□□□ -0.24
PCSK6-202ENST00000398185 FHAD1B1AJZ9 1412 aa13.55□□□□□ -0.24
PCSK6-202ENST00000398185 ERICH3Q5RHP9 1530 aa13.54□□□□□ -0.24
PCSK6-202ENST00000398185 RRP7BPQ9NSQ0 103 aa13.53□□□□□ -0.24
PCSK6-202ENST00000398185 CNGB1Q14028 1251 aaPredicted RBP13.53□□□□□ -0.24
PCSK6-202ENST00000398185 KANK4Q5T7N3 995 aaPredicted RBP13.53□□□□□ -0.24
PCSK6-202ENST00000398185 PRDM2Q13029 1718 aa13.52□□□□□ -0.24
PCSK6-202ENST00000398185 TSPY4P0CV99 314 aa13.52□□□□□ -0.25
PCSK6-202ENST00000398185 TSPY10P0CW01 314 aa13.52□□□□□ -0.25
PCSK6-202ENST00000398185 ZNF326Q5BKZ1 582 aaKnown RBP13.51□□□□□ -0.25
PCSK6-202ENST00000398185 GGT6Q6P531 493 aa13.51□□□□□ -0.25
PCSK6-202ENST00000398185 STAG3Q9UJ98 1225 aa13.49□□□□□ -0.25
PCSK6-202ENST00000398185 HNRNPMP52272 730 aaKnown RBP eCLIP13.47□□□□□ -0.255e-7■■■□□ 15
PCSK6-202ENST00000398185 POLR3GLQ9BT43 218 aa13.47□□□□□ -0.25
PCSK6-202ENST00000398185 ARAP1Q96P48 1450 aa13.46□□□□□ -0.25
PCSK6-202ENST00000398185 NEUROD1Q13562 356 aa13.46□□□□□ -0.25
PCSK6-202ENST00000398185 ARHGAP35Q9NRY4 1499 aa13.44□□□□□ -0.26
PCSK6-202ENST00000398185 PLEKHG5O94827 1062 aa13.44□□□□□ -0.26
PCSK6-202ENST00000398185 RAPGEF3O95398 923 aa13.44□□□□□ -0.26
PCSK6-202ENST00000398185 SYNJ2O15056 1496 aa13.44□□□□□ -0.26
PCSK6-202ENST00000398185 WDR62O43379 1518 aa13.41□□□□□ -0.26
PCSK6-202ENST00000398185 GRIN2AQ12879 1464 aa13.41□□□□□ -0.26
PCSK6-202ENST00000398185 FMN1Q68DA7 1419 aa13.38□□□□□ -0.27
PCSK6-202ENST00000398185 EFCAB2Q5VUJ9 269 aa13.38□□□□□ -0.27
PCSK6-202ENST00000398185 AFAP1Q8N556 730 aa13.37□□□□□ -0.27
PCSK6-202ENST00000398185 EIF4G3O43432 1585 aaKnown RBP13.37□□□□□ -0.27
PCSK6-202ENST00000398185 ZNF644Q9H582 1327 aaPredicted RBP13.37□□□□□ -0.27
PCSK6-202ENST00000398185 SLC4A1APQ9BWU0 796 aaKnown RBP13.36□□□□□ -0.27
PCSK6-202ENST00000398185 CCNB3Q8WWL7 1395 aa13.36□□□□□ -0.27
PCSK6-202ENST00000398185 MAGI1Q96QZ7 1491 aaPredicted RBP13.34□□□□□ -0.27
PCSK6-202ENST00000398185 CUL7Q14999 1698 aa13.33□□□□□ -0.27
PCSK6-202ENST00000398185 PLB1Q6P1J6 1458 aa13.32□□□□□ -0.28
PCSK6-202ENST00000398185 THOC2Q8NI27 1593 aaKnown RBP13.32□□□□□ -0.28
PCSK6-202ENST00000398185 RGL3Q3MIN7 710 aa13.31□□□□□ -0.28
PCSK6-202ENST00000398185 KIF3BO15066 747 aa13.3□□□□□ -0.28
PCSK6-202ENST00000398185 SCAF1Q9H7N4 1312 aaKnown RBP13.29□□□□□ -0.28
PCSK6-202ENST00000398185 KIAA0586Q9BVV6 1533 aa13.28□□□□□ -0.28
PCSK6-202ENST00000398185 NUTM2DQ5VT03 806 aaPredicted RBP13.27□□□□□ -0.28
PCSK6-202ENST00000398185 KDM2AQ9Y2K7 1162 aa13.27□□□□□ -0.28
PCSK6-202ENST00000398185 TARBP1Q13395 1621 aaKnown RBP13.26□□□□□ -0.29
PCSK6-202ENST00000398185 ABCA5Q8WWZ7 1642 aa13.26□□□□□ -0.29
PCSK6-202ENST00000398185 SPAG9O60271 1321 aaKnown RBP13.24□□□□□ -0.29
PCSK6-202ENST00000398185 EFCAB5A4FU69 1503 aa13.24□□□□□ -0.29
PCSK6-202ENST00000398185 FOXD1Q16676 465 aa13.23□□□□□ -0.29
PCSK6-202ENST00000398185 CASKIN1Q8WXD9 1431 aa13.22□□□□□ -0.29
PCSK6-202ENST00000398185 PPP1R15AO75807 674 aaPredicted RBP13.22□□□□□ -0.29
PCSK6-202ENST00000398185 C14orf37Q86TY3 774 aa13.22□□□□□ -0.29
PCSK6-202ENST00000398185 UACAQ9BZF9 1416 aa13.21□□□□□ -0.29
PCSK6-202ENST00000398185 IQGAP2Q13576 1575 aa13.21□□□□□ -0.29
PCSK6-202ENST00000398185 LRRC9Q6ZRR7 1453 aa13.2□□□□□ -0.3
PCSK6-202ENST00000398185 CEBPAP49715 358 aaPredicted RBP13.19□□□□□ -0.3
PCSK6-202ENST00000398185 PHLDB1Q86UU1 1377 aa13.19□□□□□ -0.3
PCSK6-202ENST00000398185 ADAMTS12P58397 1594 aa13.19□□□□□ -0.3
PCSK6-202ENST00000398185 FYCO1Q9BQS8 1478 aa13.18□□□□□ -0.3
PCSK6-202ENST00000398185 ARHGEF11O15085 1522 aa13.18□□□□□ -0.3
PCSK6-202ENST00000398185 PCF11O94913 1555 aaKnown RBP13.18□□□□□ -0.3
PCSK6-202ENST00000398185 PBRM1Q86U86 1689 aa13.17□□□□□ -0.3
PCSK6-202ENST00000398185 WASHC2CQ9Y4E1 1318 aa13.16□□□□□ -0.3
PCSK6-202ENST00000398185 TIAM1Q13009 1591 aa13.16□□□□□ -0.3
PCSK6-202ENST00000398185 CDK13Q14004 1512 aaKnown RBP13.15□□□□□ -0.3
PCSK6-202ENST00000398185 WDR97A6NE52 1622 aa13.15□□□□□ -0.3
PCSK6-202ENST00000398185 ERCC6L2Q5T890 1561 aa13.14□□□□□ -0.31
PCSK6-202ENST00000398185 CTTNBP2Q8WZ74 1663 aa13.14□□□□□ -0.31
PCSK6-202ENST00000398185 CD109Q6YHK3 1445 aa13.14□□□□□ -0.31
PCSK6-202ENST00000398185 ASXL2Q76L83 1435 aa13.1□□□□□ -0.31
PCSK6-202ENST00000398185 SCAPERQ9BY12 1400 aa13.1□□□□□ -0.31
PCSK6-202ENST00000398185 CCDC18Q5T9S5 1454 aa13.1□□□□□ -0.31
PCSK6-202ENST00000398185 SAFB2Q14151 953 aaKnown RBP eCLIP13.09□□□□□ -0.312e-6■□□□□ 9.5
PCSK6-202ENST00000398185 RAB3GAP2Q9H2M9 1393 aa13.09□□□□□ -0.31
PCSK6-202ENST00000398185 CHD1O14646 1710 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms