RNA–Protein interactions for RNA: ENST00000398017.2

CHEK2-205, Transcript of checkpoint kinase 2, humanhuman

TSL 5

Gene CHEK2, Length 713 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK2-205ENST00000398017 SPDYE1Q8NFV5 336 aaPredicted RBP14.55□□□□□ -0.08
CHEK2-205ENST00000398017 KIF21AQ7Z4S6 1674 aa14.52□□□□□ -0.09
CHEK2-205ENST00000398017 STAG3Q9UJ98 1225 aa14.51□□□□□ -0.09
CHEK2-205ENST00000398017 PROM2Q8N271 834 aa14.49□□□□□ -0.09
CHEK2-205ENST00000398017 CFTRP13569 1480 aa14.47□□□□□ -0.09
CHEK2-205ENST00000398017 THOC2Q8NI27 1593 aaKnown RBP14.46□□□□□ -0.09
CHEK2-205ENST00000398017 CCDC88BA6NC98 1476 aa14.45□□□□□ -0.1
CHEK2-205ENST00000398017 FANCD2Q9BXW9 1451 aa14.45□□□□□ -0.1
CHEK2-205ENST00000398017 CEP164Q9UPV0 1460 aa14.45□□□□□ -0.1
CHEK2-205ENST00000398017 CLEC11AQ9Y240 323 aa14.45□□□□□ -0.1
CHEK2-205ENST00000398017 MRC2Q9UBG0 1479 aa14.44□□□□□ -0.1
CHEK2-205ENST00000398017 SUPT5HO00267 1087 aaKnown RBP14.43□□□□□ -0.1
CHEK2-205ENST00000398017 PITPNM1O00562 1244 aa14.41□□□□□ -0.1
CHEK2-205ENST00000398017 CHRDL2Q6WN34 429 aa14.39□□□□□ -0.11
CHEK2-205ENST00000398017 FBXO3Q9UK99 471 aa14.38□□□□□ -0.11
CHEK2-205ENST00000398017 WDR62O43379 1518 aa14.35□□□□□ -0.11
CHEK2-205ENST00000398017 PRR29P0C7W0 189 aa14.34□□□□□ -0.11
CHEK2-205ENST00000398017 SOCS7O14512 581 aa14.32□□□□□ -0.12
CHEK2-205ENST00000398017 PRDM2Q13029 1718 aa14.29□□□□□ -0.12
CHEK2-205ENST00000398017 URB2Q14146 1524 aaKnown RBP14.27□□□□□ -0.12
CHEK2-205ENST00000398017 ABCC8Q09428 1581 aa14.26□□□□□ -0.13
CHEK2-205ENST00000398017 LMTK3Q96Q04 1460 aa14.21□□□□□ -0.13
CHEK2-205ENST00000398017 PLEKHG5O94827 1062 aa14.21□□□□□ -0.13
CHEK2-205ENST00000398017 FXR2P51116 673 aaKnown RBP eCLIP14.18□□□□□ -0.14
CHEK2-205ENST00000398017 TOPBP1Q92547 1522 aa14.18□□□□□ -0.14
CHEK2-205ENST00000398017 ILDR2Q71H61 639 aa14.17□□□□□ -0.14
CHEK2-205ENST00000398017 IFT140Q96RY7 1462 aa14.17□□□□□ -0.14
CHEK2-205ENST00000398017 DNMBPQ6XZF7 1577 aa14.14□□□□□ -0.15
CHEK2-205ENST00000398017 PIP4P2Q8N4L2 257 aa14.14□□□□□ -0.15
CHEK2-205ENST00000398017 PRKAR2AP13861 404 aaKnown RBP14.1□□□□□ -0.15
CHEK2-205ENST00000398017 MIER1Q8N108 512 aa14.1□□□□□ -0.15
CHEK2-205ENST00000398017 PLCD3Q8N3E9 789 aa14.1□□□□□ -0.15
CHEK2-205ENST00000398017 SOGA1O94964 1423 aa14.08□□□□□ -0.15
CHEK2-205ENST00000398017 ZNF608Q9ULD9 1512 aaPredicted RBP14.07□□□□□ -0.16
CHEK2-205ENST00000398017 ZBTB47Q9UFB7 747 aaPredicted RBP14.06□□□□□ -0.16
CHEK2-205ENST00000398017 RIMBP3CA6NJZ7 1639 aa14.05□□□□□ -0.16
CHEK2-205ENST00000398017 RIMBP3BA6NNM3 1639 aa14.05□□□□□ -0.16
CHEK2-205ENST00000398017 RIMBP3Q9UFD9 1639 aa14.05□□□□□ -0.16
CHEK2-205ENST00000398017 VASPP50552 380 aaPredicted RBP14.05□□□□□ -0.16
CHEK2-205ENST00000398017 AQRO60306 1485 aaKnown RBP eCLIP14.04□□□□□ -0.161e-11■■■■■ 27.3
CHEK2-205ENST00000398017 POLA1P09884 1462 aaPredicted RBP14.04□□□□□ -0.16
CHEK2-205ENST00000398017 RAD54L2Q9Y4B4 1467 aa14.02□□□□□ -0.16
CHEK2-205ENST00000398017 TDRD9Q8NDG6 1382 aaKnown RBP14.02□□□□□ -0.17
CHEK2-205ENST00000398017 CYB5RLQ6IPT4 315 aa14.02□□□□□ -0.17
CHEK2-205ENST00000398017 FBXO41Q8TF61 875 aa14.02□□□□□ -0.17
CHEK2-205ENST00000398017 POTEHQ6S545 545 aa14.01□□□□□ -0.17
CHEK2-205ENST00000398017 CREBZFQ9NS37 354 aa14.01□□□□□ -0.17
CHEK2-205ENST00000398017 CHADLQ6NUI6 762 aa14□□□□□ -0.17
CHEK2-205ENST00000398017 FGD5Q6ZNL6 1462 aa13.99□□□□□ -0.17
CHEK2-205ENST00000398017 TARBP1Q13395 1621 aaKnown RBP13.99□□□□□ -0.17
CHEK2-205ENST00000398017 CUX1P39880 1505 aa13.98□□□□□ -0.17
CHEK2-205ENST00000398017 EIF4G3O43432 1585 aaKnown RBP13.97□□□□□ -0.17
CHEK2-205ENST00000398017 CHMP7Q8WUX9 453 aaPredicted RBP13.97□□□□□ -0.17
CHEK2-205ENST00000398017 NPM1P06748 294 aaKnown RBP eCLIP13.96□□□□□ -0.17
CHEK2-205ENST00000398017 FARP1Q9Y4F1 1045 aaPredicted RBP13.94□□□□□ -0.18
CHEK2-205ENST00000398017 WRNQ14191 1432 aaPredicted RBP eCLIP13.91□□□□□ -0.18
CHEK2-205ENST00000398017 KLHL34Q8N239 644 aa13.91□□□□□ -0.18
CHEK2-205ENST00000398017 WDR97A6NE52 1622 aa13.89□□□□□ -0.19
CHEK2-205ENST00000398017 GRIN2BQ13224 1484 aa13.88□□□□□ -0.19
CHEK2-205ENST00000398017 GAPVD1Q14C86 1478 aa13.87□□□□□ -0.19
CHEK2-205ENST00000398017 SNAPC4Q5SXM2 1469 aa13.85□□□□□ -0.19
CHEK2-205ENST00000398017 ABCA10Q8WWZ4 1543 aa13.85□□□□□ -0.19
CHEK2-205ENST00000398017 CHD1O14646 1710 aa13.84□□□□□ -0.19
CHEK2-205ENST00000398017 MAGI1Q96QZ7 1491 aaPredicted RBP13.84□□□□□ -0.19
CHEK2-205ENST00000398017 TOP2BQ02880 1626 aa13.83□□□□□ -0.2
CHEK2-205ENST00000398017 ARHGEF11O15085 1522 aa13.82□□□□□ -0.2
CHEK2-205ENST00000398017 MNX1P50219 401 aaPredicted RBP13.81□□□□□ -0.2
CHEK2-205ENST00000398017 BIVM-ERCC5R4GMW8 1640 aa13.81□□□□□ -0.2
CHEK2-205ENST00000398017 SYNJ2O15056 1496 aa13.8□□□□□ -0.2
CHEK2-205ENST00000398017 SYNJ1O43426 1573 aa13.79□□□□□ -0.2
CHEK2-205ENST00000398017 KDM4FA0A1W2PPD8 638 aa13.79□□□□□ -0.2
CHEK2-205ENST00000398017 PAK3O75914 559 aaPredicted RBP13.79□□□□□ -0.2
CHEK2-205ENST00000398017 HAX1O00165 279 aa13.78□□□□□ -0.2
CHEK2-205ENST00000398017 IFNLR1Q8IU57 520 aaPredicted RBP13.78□□□□□ -0.2
CHEK2-205ENST00000398017 PBRM1Q86U86 1689 aa13.78□□□□□ -0.2
CHEK2-205ENST00000398017 DISP3Q9P2K9 1392 aa13.75□□□□□ -0.21
CHEK2-205ENST00000398017 SPOCK2Q92563 424 aa13.75□□□□□ -0.21
CHEK2-205ENST00000398017 ABCA5Q8WWZ7 1642 aa13.74□□□□□ -0.21
CHEK2-205ENST00000398017 CD44P16070 742 aaKnown RBP13.71□□□□□ -0.21
CHEK2-205ENST00000398017 FHAD1B1AJZ9 1412 aa13.71□□□□□ -0.22
CHEK2-205ENST00000398017 C19orf67A6NJJ6 358 aa13.69□□□□□ -0.22
CHEK2-205ENST00000398017 FAM212AQ96EL1 285 aa13.69□□□□□ -0.22
CHEK2-205ENST00000398017 ERICH3Q5RHP9 1530 aa13.69□□□□□ -0.22
CHEK2-205ENST00000398017 GRIN2AQ12879 1464 aa13.67□□□□□ -0.22
CHEK2-205ENST00000398017 KIF27Q86VH2 1401 aa13.67□□□□□ -0.22
CHEK2-205ENST00000398017 CLASP1Q7Z460 1538 aa13.65□□□□□ -0.22
CHEK2-205ENST00000398017 NUBP1P53384 320 aa13.64□□□□□ -0.23
CHEK2-205ENST00000398017 GSE1Q14687 1217 aa13.63□□□□□ -0.23
CHEK2-205ENST00000398017 ADAMTS12P58397 1594 aa13.62□□□□□ -0.23
CHEK2-205ENST00000398017 IGF1RP08069 1367 aa13.62□□□□□ -0.23
CHEK2-205ENST00000398017 JPH4Q96JJ6 628 aa13.62□□□□□ -0.23
CHEK2-205ENST00000398017 ZRANB1Q9UGI0 708 aa13.62□□□□□ -0.23
CHEK2-205ENST00000398017 ARAP1Q96P48 1450 aa13.61□□□□□ -0.23
CHEK2-205ENST00000398017 ERCC6L2Q5T890 1561 aa13.61□□□□□ -0.23
CHEK2-205ENST00000398017 DCAF8Q5TAQ9 597 aa13.6□□□□□ -0.23
CHEK2-205ENST00000398017 RASEFQ8IZ41 740 aa13.6□□□□□ -0.23
CHEK2-205ENST00000398017 TSPYL2Q9H2G4 693 aaPredicted RBP13.6□□□□□ -0.23
CHEK2-205ENST00000398017 NUP160Q12769 1436 aa13.59□□□□□ -0.23
CHEK2-205ENST00000398017 CLCN6P51797 869 aa13.57□□□□□ -0.24
CHEK2-205ENST00000398017 CEP170Q5SW79 1584 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms