RNA–Protein interactions for RNA: ENST00000398017.2

CHEK2-205, Transcript of checkpoint kinase 2, humanhuman

TSL 5

Gene CHEK2, Length 713 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK2-205ENST00000398017 AEBP2Q6ZN18 517 aaPredicted RBP26.29■■□□□ 1.8
CHEK2-205ENST00000398017 CHIC1Q5VXU3 224 aa25.73■■□□□ 1.71
CHEK2-205ENST00000398017 SENP3Q9H4L4 574 aaPredicted RBP22.55■■□□□ 1.2
CHEK2-205ENST00000398017 PHF23Q9BUL5 403 aaPredicted RBP22.49■■□□□ 1.19
CHEK2-205ENST00000398017 PLPPR3Q6T4P5 718 aa20.96■□□□□ 0.95
CHEK2-205ENST00000398017 FOXD1Q16676 465 aa20.78■□□□□ 0.92
CHEK2-205ENST00000398017 ADRA2BP18089 450 aa19.89■□□□□ 0.77
CHEK2-205ENST00000398017 PPP6R1Q9UPN7 881 aa19.86■□□□□ 0.77
CHEK2-205ENST00000398017 PIAS4Q8N2W9 510 aaPredicted RBP19.68■□□□□ 0.74
CHEK2-205ENST00000398017 MSH5O43196 834 aa19.39■□□□□ 0.69
CHEK2-205ENST00000398017 NISCHQ9Y2I1 1504 aa19.36■□□□□ 0.69
CHEK2-205ENST00000398017 SCAF1Q9H7N4 1312 aaKnown RBP18.47■□□□□ 0.55
CHEK2-205ENST00000398017 PPP4R3CPQ6ZMV5 832 aa18.38■□□□□ 0.53
CHEK2-205ENST00000398017 NCBP3Q53F19 620 aaKnown RBP18.03■□□□□ 0.48
CHEK2-205ENST00000398017 MAPK8IP2Q13387 824 aaPredicted RBP18.02■□□□□ 0.48
CHEK2-205ENST00000398017 CNKSR2Q8WXI2 1034 aa17.95■□□□□ 0.46
CHEK2-205ENST00000398017 DMRT2Q9Y5R5 561 aa17.92■□□□□ 0.46
CHEK2-205ENST00000398017 KCNA4P22459 653 aa17.78■□□□□ 0.44
CHEK2-205ENST00000398017 POTEDQ86YR6 584 aa17.64■□□□□ 0.41
CHEK2-205ENST00000398017 RNF216Q9NWF9 866 aaPredicted RBP17.61■□□□□ 0.41
CHEK2-205ENST00000398017 NPM3O75607 178 aaKnown RBP17.57■□□□□ 0.4
CHEK2-205ENST00000398017 DNAJC5BQ9UF47 199 aa17.54■□□□□ 0.4
CHEK2-205ENST00000398017 HOXD11P31277 338 aaPredicted RBP17.52■□□□□ 0.4
CHEK2-205ENST00000398017 DNAJC5Q9H3Z4 198 aa17.41■□□□□ 0.38
CHEK2-205ENST00000398017 CCDC180Q9P1Z9 1646 aa17.23■□□□□ 0.35
CHEK2-205ENST00000398017 DCAF8L1A6NGE4 600 aa17.21■□□□□ 0.35
CHEK2-205ENST00000398017 ABCC9O60706 1549 aa17.12■□□□□ 0.33
CHEK2-205ENST00000398017 SLC4A1APQ9BWU0 796 aaKnown RBP17.03■□□□□ 0.32
CHEK2-205ENST00000398017 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.77■□□□□ 0.282e-6■□□□□ 8.5
CHEK2-205ENST00000398017 DCAF8L2P0C7V8 631 aa16.56■□□□□ 0.24
CHEK2-205ENST00000398017 SLC4A2P04920 1241 aa16.55■□□□□ 0.24
CHEK2-205ENST00000398017 FOXD4L1Q9NU39 408 aa16.51■□□□□ 0.23
CHEK2-205ENST00000398017 RNF39Q9H2S5 420 aa16.5■□□□□ 0.23
CHEK2-205ENST00000398017 C1QBPQ07021 282 aaKnown RBP16.39■□□□□ 0.21
CHEK2-205ENST00000398017 EHMT2Q96KQ7 1210 aa16.39■□□□□ 0.21
CHEK2-205ENST00000398017 RB1CC1Q8TDY2 1594 aa16.38■□□□□ 0.21
CHEK2-205ENST00000398017 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.38■□□□□ 0.21
CHEK2-205ENST00000398017 HNRNPUL2Q1KMD3 747 aaKnown RBP16.38■□□□□ 0.21
CHEK2-205ENST00000398017 U3KPZ7 1027 aaPredicted RBP16.37■□□□□ 0.21
CHEK2-205ENST00000398017 MYCNP04198 464 aaPredicted RBP16.35■□□□□ 0.21
CHEK2-205ENST00000398017 NACADO15069 1562 aa16.3■□□□□ 0.2
CHEK2-205ENST00000398017 APLP2Q06481 763 aa16.29■□□□□ 0.2
CHEK2-205ENST00000398017 ZBTB22O15209 634 aa16.28■□□□□ 0.2
CHEK2-205ENST00000398017 SAMD1Q6SPF0 538 aaPredicted RBP16.25■□□□□ 0.19
CHEK2-205ENST00000398017 CACNB1Q02641 598 aaPredicted RBP16.19■□□□□ 0.18
CHEK2-205ENST00000398017 CSRNP3Q8WYN3 585 aa16.19■□□□□ 0.18
CHEK2-205ENST00000398017 MYO15BQ96JP2 1530 aa16.09■□□□□ 0.17
CHEK2-205ENST00000398017 PABPN1Q86U42 306 aaKnown RBP eCLIP16.05■□□□□ 0.16
CHEK2-205ENST00000398017 ZCCHC6Q5VYS8 1495 aaKnown RBP16.03■□□□□ 0.16
CHEK2-205ENST00000398017 ATXN8OSP0DMR3 200 aa16■□□□□ 0.15
CHEK2-205ENST00000398017 CAPN15O75808 1086 aa15.98■□□□□ 0.15
CHEK2-205ENST00000398017 DCAF1Q9Y4B6 1507 aa15.97■□□□□ 0.15
CHEK2-205ENST00000398017 ZNF219Q9P2Y4 722 aaPredicted RBP15.95■□□□□ 0.14
CHEK2-205ENST00000398017 SPINK5Q9NQ38 1064 aaPredicted RBP15.9■□□□□ 0.14
CHEK2-205ENST00000398017 UNC13AQ9UPW8 1703 aa15.9■□□□□ 0.14
CHEK2-205ENST00000398017 TRIM41Q8WV44 630 aa15.86■□□□□ 0.13
CHEK2-205ENST00000398017 TRHP20396 242 aaPredicted RBP15.85■□□□□ 0.13
CHEK2-205ENST00000398017 BICRAQ9NZM4 1560 aa15.78■□□□□ 0.12
CHEK2-205ENST00000398017 SCRIBQ14160 1630 aa15.76■□□□□ 0.11
CHEK2-205ENST00000398017 ATF5Q9Y2D1 282 aaPredicted RBP15.71■□□□□ 0.11
CHEK2-205ENST00000398017 DSG3P32926 999 aa15.65■□□□□ 0.1
CHEK2-205ENST00000398017 SHROOM4Q9ULL8 1493 aa15.64■□□□□ 0.09
CHEK2-205ENST00000398017 ABCB7O75027 752 aa15.58■□□□□ 0.08
CHEK2-205ENST00000398017 POLA2Q14181 598 aa15.56■□□□□ 0.08
CHEK2-205ENST00000398017 ZBTB12Q9Y330 459 aaPredicted RBP15.47■□□□□ 0.07
CHEK2-205ENST00000398017 CC2D2AQ9P2K1 1620 aa15.43■□□□□ 0.06
CHEK2-205ENST00000398017 EIF4G1Q04637 1599 aaKnown RBP15.43■□□□□ 0.06
CHEK2-205ENST00000398017 CECR2Q9BXF3 1484 aa15.4■□□□□ 0.06
CHEK2-205ENST00000398017 FBLN2P98095 1184 aa15.34■□□□□ 0.05
CHEK2-205ENST00000398017 ILDR1Q86SU0 546 aaPredicted RBP15.32■□□□□ 0.04
CHEK2-205ENST00000398017 RBM42Q9BTD8 480 aaKnown RBP15.1■□□□□ 0.01
CHEK2-205ENST00000398017 MKRN4PQ13434 485 aaPredicted RBP15.05■□□□□ -0
CHEK2-205ENST00000398017 NCAPD3P42695 1498 aa15.05■□□□□ -0
CHEK2-205ENST00000398017 SMARCA4P51532 1647 aa15.03■□□□□ -0
CHEK2-205ENST00000398017 BAZ1AQ9NRL2 1556 aaPredicted RBP15.03■□□□□ -0
CHEK2-205ENST00000398017 SMARCA2P51531 1590 aa15.02■□□□□ -0
CHEK2-205ENST00000398017 ATAD2BQ9ULI0 1458 aa15.02■□□□□ -0
CHEK2-205ENST00000398017 OSCARQ8IYS5 282 aa15.01□□□□□ -0.01
CHEK2-205ENST00000398017 CUX2O14529 1486 aa14.99□□□□□ -0.01
CHEK2-205ENST00000398017 SPDYE2BA6NHP3 402 aa14.96□□□□□ -0.01
CHEK2-205ENST00000398017 SPDYE6P0CI01 402 aa14.96□□□□□ -0.01
CHEK2-205ENST00000398017 SPDYE2Q495Y8 402 aa14.96□□□□□ -0.01
CHEK2-205ENST00000398017 BAZ1BQ9UIG0 1483 aaKnown RBP14.94□□□□□ -0.02
CHEK2-205ENST00000398017 HMGXB3Q12766 1538 aa14.91□□□□□ -0.02
CHEK2-205ENST00000398017 MROH2BQ7Z745 1585 aa14.9□□□□□ -0.02
CHEK2-205ENST00000398017 ZNF692Q9BU19 519 aaPredicted RBP14.87□□□□□ -0.03
CHEK2-205ENST00000398017 PEG3Q9GZU2 1588 aa14.85□□□□□ -0.03
CHEK2-205ENST00000398017 ERCC6Q03468 1493 aa14.83□□□□□ -0.03
CHEK2-205ENST00000398017 SPDYE4A6NLX3 237 aa14.82□□□□□ -0.04
CHEK2-205ENST00000398017 AKT1S1Q96B36 256 aa14.82□□□□□ -0.04
CHEK2-205ENST00000398017 WIZO95785 1651 aa14.75□□□□□ -0.05
CHEK2-205ENST00000398017 SSUH2Q9Y2M2 353 aa14.74□□□□□ -0.05
CHEK2-205ENST00000398017 NESP48681 1621 aa14.73□□□□□ -0.05
CHEK2-205ENST00000398017 FKBP8Q14318 412 aa14.72□□□□□ -0.05
CHEK2-205ENST00000398017 RSF1Q96T23 1441 aaPredicted RBP14.7□□□□□ -0.06
CHEK2-205ENST00000398017 LAMC3Q9Y6N6 1575 aa14.68□□□□□ -0.06
CHEK2-205ENST00000398017 PDS5BQ9NTI5 1447 aa14.66□□□□□ -0.06
CHEK2-205ENST00000398017 CADPSQ9ULU8 1353 aa14.65□□□□□ -0.06
CHEK2-205ENST00000398017 REM2Q8IYK8 340 aaPredicted RBP14.6□□□□□ -0.07
CHEK2-205ENST00000398017 TOP2AP11388 1531 aaKnown RBP14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 187.7 ms