RNA–Protein interactions for RNA: ENST00000397459.6

CNTN4-201, Transcript of contactin 4, humanhuman

TSL 1 (best) BASIC

Gene CNTN4, Length 2,322 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN4-201ENST00000397459 RANGAP1P46060 587 aaPredicted RBP11.88□□□□□ -0.51
CNTN4-201ENST00000397459 CARMIL1Q5VZK9 1371 aa11.88□□□□□ -0.51
CNTN4-201ENST00000397459 WDR97A6NE52 1622 aa11.86□□□□□ -0.51
CNTN4-201ENST00000397459 CCNB3Q8WWL7 1395 aa11.85□□□□□ -0.51
CNTN4-201ENST00000397459 MRC2Q9UBG0 1479 aa11.84□□□□□ -0.51
CNTN4-201ENST00000397459 PRKCSHP14314 528 aaPredicted RBP11.84□□□□□ -0.51
CNTN4-201ENST00000397459 ARHGAP35Q9NRY4 1499 aa11.84□□□□□ -0.51
CNTN4-201ENST00000397459 MIER1Q8N108 512 aa11.83□□□□□ -0.52
CNTN4-201ENST00000397459 TDRD9Q8NDG6 1382 aaKnown RBP11.83□□□□□ -0.52
CNTN4-201ENST00000397459 FHAD1B1AJZ9 1412 aa11.83□□□□□ -0.52
CNTN4-201ENST00000397459 TIMELESSQ9UNS1 1208 aa11.81□□□□□ -0.52
CNTN4-201ENST00000397459 TARBP1Q13395 1621 aaKnown RBP11.81□□□□□ -0.52
CNTN4-201ENST00000397459 TIAM1Q13009 1591 aa11.81□□□□□ -0.52
CNTN4-201ENST00000397459 ABCA5Q8WWZ7 1642 aa11.81□□□□□ -0.52
CNTN4-201ENST00000397459 GAPVD1Q14C86 1478 aa11.79□□□□□ -0.52
CNTN4-201ENST00000397459 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.79□□□□□ -0.52
CNTN4-201ENST00000397459 CUL7Q14999 1698 aa11.78□□□□□ -0.52
CNTN4-201ENST00000397459 CFAP43Q8NDM7 1665 aa11.78□□□□□ -0.52
CNTN4-201ENST00000397459 EFCAB5A4FU69 1503 aa11.77□□□□□ -0.52
CNTN4-201ENST00000397459 WDR62O43379 1518 aa11.77□□□□□ -0.52
CNTN4-201ENST00000397459 ERCC6Q03468 1493 aa11.77□□□□□ -0.53
CNTN4-201ENST00000397459 AQRO60306 1485 aaKnown RBP eCLIP11.76□□□□□ -0.53
CNTN4-201ENST00000397459 LRRC9Q6ZRR7 1453 aa11.73□□□□□ -0.53
CNTN4-201ENST00000397459 SETD5Q9C0A6 1442 aa11.73□□□□□ -0.53
CNTN4-201ENST00000397459 KANK4Q5T7N3 995 aaPredicted RBP11.72□□□□□ -0.53
CNTN4-201ENST00000397459 IFT140Q96RY7 1462 aa11.72□□□□□ -0.53
CNTN4-201ENST00000397459 THOC2Q8NI27 1593 aaKnown RBP11.72□□□□□ -0.53
CNTN4-201ENST00000397459 FYCO1Q9BQS8 1478 aa11.71□□□□□ -0.53
CNTN4-201ENST00000397459 YTHDC1Q96MU7 727 aaKnown RBP11.7□□□□□ -0.54
CNTN4-201ENST00000397459 PBRM1Q86U86 1689 aa11.7□□□□□ -0.54
CNTN4-201ENST00000397459 ZNF608Q9ULD9 1512 aaPredicted RBP11.7□□□□□ -0.54
CNTN4-201ENST00000397459 RAB3GAP2Q9H2M9 1393 aa11.69□□□□□ -0.54
CNTN4-201ENST00000397459 CTTNBP2Q8WZ74 1663 aa11.68□□□□□ -0.54
CNTN4-201ENST00000397459 MAPKBP1O60336 1514 aa11.67□□□□□ -0.54
CNTN4-201ENST00000397459 GRIN2BQ13224 1484 aa11.67□□□□□ -0.54
CNTN4-201ENST00000397459 CASKIN1Q8WXD9 1431 aa11.66□□□□□ -0.54
CNTN4-201ENST00000397459 P3H3Q8IVL6 736 aa11.65□□□□□ -0.54
CNTN4-201ENST00000397459 SLC24A1O60721 1099 aa11.65□□□□□ -0.54
CNTN4-201ENST00000397459 ADAMTS12P58397 1594 aa11.64□□□□□ -0.55
CNTN4-201ENST00000397459 FMN1Q68DA7 1419 aa11.64□□□□□ -0.55
CNTN4-201ENST00000397459 ERICH6Q7L0X2 663 aa11.64□□□□□ -0.55
CNTN4-201ENST00000397459 PCF11O94913 1555 aaKnown RBP11.64□□□□□ -0.55
CNTN4-201ENST00000397459 EIF4G3O43432 1585 aaKnown RBP11.62□□□□□ -0.55
CNTN4-201ENST00000397459 FHOD3Q2V2M9 1422 aa11.62□□□□□ -0.55
CNTN4-201ENST00000397459 SNAPC4Q5SXM2 1469 aa11.59□□□□□ -0.55
CNTN4-201ENST00000397459 PHLDB1Q86UU1 1377 aa11.59□□□□□ -0.55
CNTN4-201ENST00000397459 SAMD9Q5K651 1589 aa11.58□□□□□ -0.56
CNTN4-201ENST00000397459 CCER2I3L3R5 266 aa11.58□□□□□ -0.56
CNTN4-201ENST00000397459 SUPT16HQ9Y5B9 1047 aaKnown RBP11.58□□□□□ -0.56
CNTN4-201ENST00000397459 IQGAP2Q13576 1575 aa11.55□□□□□ -0.56
CNTN4-201ENST00000397459 HFM1A2PYH4 1435 aa11.54□□□□□ -0.56
CNTN4-201ENST00000397459 FGD6Q6ZV73 1430 aa11.54□□□□□ -0.56
CNTN4-201ENST00000397459 ATP1B4Q9UN42 357 aaPredicted RBP11.54□□□□□ -0.56
CNTN4-201ENST00000397459 MAGI1Q96QZ7 1491 aaPredicted RBP11.54□□□□□ -0.56
CNTN4-201ENST00000397459 UACAQ9BZF9 1416 aa11.54□□□□□ -0.56
CNTN4-201ENST00000397459 GRIN2AQ12879 1464 aa11.53□□□□□ -0.56
CNTN4-201ENST00000397459 EHBP1L1Q8N3D4 1523 aa11.53□□□□□ -0.56
CNTN4-201ENST00000397459 AKNAQ7Z591 1439 aa11.53□□□□□ -0.56
CNTN4-201ENST00000397459 CCDC18Q5T9S5 1454 aa11.51□□□□□ -0.57
CNTN4-201ENST00000397459 SYNJ2O15056 1496 aa11.51□□□□□ -0.57
CNTN4-201ENST00000397459 SUPT6HQ7KZ85 1726 aaKnown RBP11.51□□□□□ -0.57
CNTN4-201ENST00000397459 CHMP7Q8WUX9 453 aaPredicted RBP11.51□□□□□ -0.57
CNTN4-201ENST00000397459 KIAA0586Q9BVV6 1533 aa11.5□□□□□ -0.57
CNTN4-201ENST00000397459 PPP1R15AO75807 674 aaPredicted RBP11.5□□□□□ -0.57
CNTN4-201ENST00000397459 FAM50AQ14320 339 aaKnown RBP11.5□□□□□ -0.57
CNTN4-201ENST00000397459 UGGT2Q9NYU1 1516 aa11.49□□□□□ -0.57
CNTN4-201ENST00000397459 PTPN23Q9H3S7 1636 aa11.48□□□□□ -0.57
CNTN4-201ENST00000397459 ITGAEP38570 1179 aa11.48□□□□□ -0.57
CNTN4-201ENST00000397459 FBLN2P98095 1184 aa11.48□□□□□ -0.57
CNTN4-201ENST00000397459 BCL11AQ9H165 835 aa11.48□□□□□ -0.57
CNTN4-201ENST00000397459 MYOM3Q5VTT5 1437 aa11.48□□□□□ -0.57
CNTN4-201ENST00000397459 MTUS2Q5JR59 1369 aa11.48□□□□□ -0.57
CNTN4-201ENST00000397459 TONSLQ96HA7 1378 aa11.48□□□□□ -0.57
CNTN4-201ENST00000397459 ANP32CO43423 234 aa11.47□□□□□ -0.57
CNTN4-201ENST00000397459 NEFLP07196 543 aa11.47□□□□□ -0.57
CNTN4-201ENST00000397459 CEP170Q5SW79 1584 aa11.47□□□□□ -0.57
CNTN4-201ENST00000397459 LRRIQ1Q96JM4 1722 aa11.46□□□□□ -0.58
CNTN4-201ENST00000397459 ARHGEF11O15085 1522 aa11.46□□□□□ -0.58
CNTN4-201ENST00000397459 TCOF1Q13428 1488 aaKnown RBP11.46□□□□□ -0.58
CNTN4-201ENST00000397459 GCC2Q8IWJ2 1684 aa11.45□□□□□ -0.58
CNTN4-201ENST00000397459 DISP1Q96F81 1524 aa11.45□□□□□ -0.58
CNTN4-201ENST00000397459 NUP160Q12769 1436 aa11.44□□□□□ -0.58
CNTN4-201ENST00000397459 HECW1Q76N89 1606 aa11.44□□□□□ -0.58
CNTN4-201ENST00000397459 NCOA2Q15596 1464 aa11.43□□□□□ -0.58
CNTN4-201ENST00000397459 KIAA0556O60303 1618 aa11.43□□□□□ -0.58
CNTN4-201ENST00000397459 MIA2Q96PC5 1412 aa11.43□□□□□ -0.58
CNTN4-201ENST00000397459 NAIPQ13075 1403 aa11.42□□□□□ -0.58
CNTN4-201ENST00000397459 ERICH6BQ5W0A0 696 aa11.41□□□□□ -0.58
CNTN4-201ENST00000397459 DDX10Q13206 875 aaKnown RBP11.4□□□□□ -0.59
CNTN4-201ENST00000397459 JPH4Q96JJ6 628 aa11.4□□□□□ -0.59
CNTN4-201ENST00000397459 TSHZ2Q9NRE2 1034 aa11.4□□□□□ -0.59
CNTN4-201ENST00000397459 SIN3AQ96ST3 1273 aa11.38□□□□□ -0.59
CNTN4-201ENST00000397459 EPRSP07814 1512 aaKnown RBP11.38□□□□□ -0.59
CNTN4-201ENST00000397459 MAGI3Q5TCQ9 1506 aa11.37□□□□□ -0.59
CNTN4-201ENST00000397459 CDK13Q14004 1512 aaKnown RBP11.36□□□□□ -0.59
CNTN4-201ENST00000397459 ARID3CA6NKF2 412 aa11.35□□□□□ -0.59
CNTN4-201ENST00000397459 ROCK1Q13464 1354 aa11.35□□□□□ -0.59
CNTN4-201ENST00000397459 CHD1O14646 1710 aa11.35□□□□□ -0.59
CNTN4-201ENST00000397459 CARMIL2Q6F5E8 1435 aa11.34□□□□□ -0.59
CNTN4-201ENST00000397459 ANP32EQ9BTT0 268 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms