RNA–Protein interactions for RNA: ENST00000397172.7

APTX-207, Transcript of aprataxin, humanhuman

TSL 1 (best) BASIC

Gene APTX, Length 1,740 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-207ENST00000397172 GRIN2BQ13224 1484 aa14.67□□□□□ -0.06
APTX-207ENST00000397172 KIF27Q86VH2 1401 aa14.66□□□□□ -0.06
APTX-207ENST00000397172 ZNF316A6NFI3 1004 aaPredicted RBP14.64□□□□□ -0.07
APTX-207ENST00000397172 ERICH3Q5RHP9 1530 aa14.63□□□□□ -0.07
APTX-207ENST00000397172 MAGI1Q96QZ7 1491 aaPredicted RBP14.62□□□□□ -0.07
APTX-207ENST00000397172 PBRM1Q86U86 1689 aa14.61□□□□□ -0.07
APTX-207ENST00000397172 SNAPC4Q5SXM2 1469 aa14.6□□□□□ -0.07
APTX-207ENST00000397172 IGF1RP08069 1367 aa14.57□□□□□ -0.08
APTX-207ENST00000397172 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.57□□□□□ -0.08
APTX-207ENST00000397172 ERICH6Q7L0X2 663 aa14.57□□□□□ -0.08
APTX-207ENST00000397172 SYNJ2O15056 1496 aa14.55□□□□□ -0.08
APTX-207ENST00000397172 FHAD1B1AJZ9 1412 aa14.55□□□□□ -0.08
APTX-207ENST00000397172 EEA1Q15075 1411 aa14.55□□□□□ -0.08
APTX-207ENST00000397172 CHMP7Q8WUX9 453 aaPredicted RBP14.53□□□□□ -0.08
APTX-207ENST00000397172 ADAMTS12P58397 1594 aa14.53□□□□□ -0.08
APTX-207ENST00000397172 RUSC2Q8N2Y8 1516 aa14.52□□□□□ -0.08
APTX-207ENST00000397172 CUL7Q14999 1698 aa14.52□□□□□ -0.09
APTX-207ENST00000397172 OSCARQ8IYS5 282 aa14.5□□□□□ -0.09
APTX-207ENST00000397172 FBLN2P98095 1184 aa14.49□□□□□ -0.09
APTX-207ENST00000397172 YTHDC1Q96MU7 727 aaKnown RBP14.49□□□□□ -0.09
APTX-207ENST00000397172 CARMIL1Q5VZK9 1371 aa14.49□□□□□ -0.09
APTX-207ENST00000397172 FAM9AQ8IZU1 332 aaPredicted RBP14.49□□□□□ -0.09
APTX-207ENST00000397172 CHD1O14646 1710 aa14.48□□□□□ -0.09
APTX-207ENST00000397172 GRIN2AQ12879 1464 aa14.47□□□□□ -0.09
APTX-207ENST00000397172 CSRNP3Q8WYN3 585 aa14.46□□□□□ -0.09
APTX-207ENST00000397172 PRXQ9BXM0 1461 aa14.43□□□□□ -0.1
APTX-207ENST00000397172 RAPGEF2Q9Y4G8 1499 aa14.43□□□□□ -0.1
APTX-207ENST00000397172 NUP160Q12769 1436 aa14.42□□□□□ -0.1
APTX-207ENST00000397172 DNAJC5Q9H3Z4 198 aa14.38□□□□□ -0.11
APTX-207ENST00000397172 SUPT16HQ9Y5B9 1047 aaKnown RBP14.38□□□□□ -0.11
APTX-207ENST00000397172 TSHZ2Q9NRE2 1034 aa14.37□□□□□ -0.11
APTX-207ENST00000397172 CLASP1Q7Z460 1538 aa14.37□□□□□ -0.11
APTX-207ENST00000397172 CEP170Q5SW79 1584 aa14.37□□□□□ -0.11
APTX-207ENST00000397172 MIER1Q8N108 512 aa14.36□□□□□ -0.11
APTX-207ENST00000397172 MYT1LQ9UL68 1186 aa14.36□□□□□ -0.11
APTX-207ENST00000397172 KIAA0586Q9BVV6 1533 aa14.33□□□□□ -0.12
APTX-207ENST00000397172 KIF21BO75037 1637 aa14.33□□□□□ -0.12
APTX-207ENST00000397172 PRKCSHP14314 528 aaPredicted RBP14.31□□□□□ -0.12
APTX-207ENST00000397172 JPH4Q96JJ6 628 aa14.27□□□□□ -0.12
APTX-207ENST00000397172 GOLGA3Q08378 1498 aa14.27□□□□□ -0.13
APTX-207ENST00000397172 SHROOM2Q13796 1616 aa14.27□□□□□ -0.13
APTX-207ENST00000397172 IQGAP2Q13576 1575 aa14.25□□□□□ -0.13
APTX-207ENST00000397172 CTTNBP2Q8WZ74 1663 aa14.24□□□□□ -0.13
APTX-207ENST00000397172 ARHGEF11O15085 1522 aa14.23□□□□□ -0.13
APTX-207ENST00000397172 PRG4Q92954 1404 aaPredicted RBP14.21□□□□□ -0.14
APTX-207ENST00000397172 UGGT2Q9NYU1 1516 aa14.2□□□□□ -0.14
APTX-207ENST00000397172 UBTFP17480 764 aaKnown RBP14.2□□□□□ -0.14
APTX-207ENST00000397172 RIMBP3CA6NJZ7 1639 aa14.19□□□□□ -0.14
APTX-207ENST00000397172 RIMBP3BA6NNM3 1639 aa14.19□□□□□ -0.14
APTX-207ENST00000397172 RIMBP3Q9UFD9 1639 aa14.19□□□□□ -0.14
APTX-207ENST00000397172 CARMIL2Q6F5E8 1435 aa14.18□□□□□ -0.14
APTX-207ENST00000397172 MAPK8IP2Q13387 824 aaPredicted RBP14.16□□□□□ -0.14
APTX-207ENST00000397172 DISP1Q96F81 1524 aa14.15□□□□□ -0.15
APTX-207ENST00000397172 ERCC6L2Q5T890 1561 aa14.14□□□□□ -0.15
APTX-207ENST00000397172 TNIKQ9UKE5 1360 aa14.14□□□□□ -0.15
APTX-207ENST00000397172 EHMT2Q96KQ7 1210 aa14.13□□□□□ -0.15
APTX-207ENST00000397172 ARAP1Q96P48 1450 aa14.13□□□□□ -0.15
APTX-207ENST00000397172 KIAA0556O60303 1618 aa14.12□□□□□ -0.15
APTX-207ENST00000397172 NEFLP07196 543 aa14.1□□□□□ -0.15
APTX-207ENST00000397172 DMRT2Q9Y5R5 561 aa14.1□□□□□ -0.15
APTX-207ENST00000397172 APLP2Q06481 763 aa14.1□□□□□ -0.15
APTX-207ENST00000397172 SAMD9Q5K651 1589 aa14.09□□□□□ -0.15
APTX-207ENST00000397172 EFCAB5A4FU69 1503 aa14.09□□□□□ -0.15
APTX-207ENST00000397172 CYB5RLQ6IPT4 315 aa14.08□□□□□ -0.16
APTX-207ENST00000397172 PTPRGP23470 1445 aa14.08□□□□□ -0.16
APTX-207ENST00000397172 RBM19Q9Y4C8 960 aaKnown RBP14.05□□□□□ -0.16
APTX-207ENST00000397172 RANGAP1P46060 587 aaPredicted RBP14.04□□□□□ -0.16
APTX-207ENST00000397172 CEP162Q5TB80 1403 aa14.03□□□□□ -0.16
APTX-207ENST00000397172 FANCIQ9NVI1 1328 aa14.02□□□□□ -0.17
APTX-207ENST00000397172 ARHGAP35Q9NRY4 1499 aa14.02□□□□□ -0.17
APTX-207ENST00000397172 CLIP1P30622 1438 aa14.01□□□□□ -0.17
APTX-207ENST00000397172 ERICH6BQ5W0A0 696 aa14.01□□□□□ -0.17
APTX-207ENST00000397172 P3H3Q8IVL6 736 aa14.01□□□□□ -0.17
APTX-207ENST00000397172 FHOD3Q2V2M9 1422 aa13.99□□□□□ -0.17
APTX-207ENST00000397172 UACAQ9BZF9 1416 aa13.99□□□□□ -0.17
APTX-207ENST00000397172 UHRF1BP1LA0JNW5 1464 aa13.99□□□□□ -0.17
APTX-207ENST00000397172 FMN1Q68DA7 1419 aa13.97□□□□□ -0.17
APTX-207ENST00000397172 ABCC2Q92887 1545 aa13.95□□□□□ -0.18
APTX-207ENST00000397172 ABCA8O94911 1581 aa13.95□□□□□ -0.18
APTX-207ENST00000397172 ADCY10Q96PN6 1610 aa13.95□□□□□ -0.18
APTX-207ENST00000397172 PLB1Q6P1J6 1458 aa13.94□□□□□ -0.18
APTX-207ENST00000397172 FKBP8Q14318 412 aa13.94□□□□□ -0.18
APTX-207ENST00000397172 NPM1P06748 294 aaKnown RBP eCLIP13.93□□□□□ -0.18
APTX-207ENST00000397172 RAPGEF6Q8TEU7 1601 aa13.91□□□□□ -0.18
APTX-207ENST00000397172 KDM5BQ9UGL1 1544 aa13.9□□□□□ -0.18
APTX-207ENST00000397172 CDK11AQ9UQ88 783 aaPredicted RBP13.88□□□□□ -0.19
APTX-207ENST00000397172 MAPKBP1O60336 1514 aa13.87□□□□□ -0.19
APTX-207ENST00000397172 NUP153P49790 1475 aaKnown RBP13.86□□□□□ -0.19
APTX-207ENST00000397172 CASKIN1Q8WXD9 1431 aa13.86□□□□□ -0.19
APTX-207ENST00000397172 HNRNPUL2Q1KMD3 747 aaKnown RBP13.85□□□□□ -0.19
APTX-207ENST00000397172 HECW1Q76N89 1606 aa13.85□□□□□ -0.19
APTX-207ENST00000397172 BCANQ96GW7 911 aa13.84□□□□□ -0.19
APTX-207ENST00000397172 ATP10BO94823 1461 aa13.84□□□□□ -0.19
APTX-207ENST00000397172 FYCO1Q9BQS8 1478 aa13.84□□□□□ -0.19
APTX-207ENST00000397172 ZCCHC11Q5TAX3 1644 aaKnown RBP13.84□□□□□ -0.19
APTX-207ENST00000397172 DEKP35659 375 aaKnown RBP13.84□□□□□ -0.19
APTX-207ENST00000397172 VPS8Q8N3P4 1428 aa13.82□□□□□ -0.2
APTX-207ENST00000397172 PCF11O94913 1555 aaKnown RBP13.81□□□□□ -0.2
APTX-207ENST00000397172 ASXL2Q76L83 1435 aa13.81□□□□□ -0.2
APTX-207ENST00000397172 EPRSP07814 1512 aaKnown RBP13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms