RNA–Protein interactions for RNA: ENST00000397088.3

GPER1-202, Transcript of G protein-coupled estrogen receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPER1, Length 2,639 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPER1-202ENST00000397088 IRX6P78412 446 aaPredicted RBP22.82■■□□□ 1.24
GPER1-202ENST00000397088 RRBP1Q9P2E9 1410 aaKnown RBP22.81■■□□□ 1.24
GPER1-202ENST00000397088 NBR1Q14596 966 aa22.81■■□□□ 1.24
GPER1-202ENST00000397088 NOP58Q9Y2X3 529 aaKnown RBP22.8■■□□□ 1.24
GPER1-202ENST00000397088 RAPGEF2Q9Y4G8 1499 aa22.76■■□□□ 1.23
GPER1-202ENST00000397088 MAPKBP1O60336 1514 aa22.75■■□□□ 1.23
GPER1-202ENST00000397088 WDR97A6NE52 1622 aa22.75■■□□□ 1.23
GPER1-202ENST00000397088 KANK4Q5T7N3 995 aaPredicted RBP22.75■■□□□ 1.23
GPER1-202ENST00000397088 PPP4R2Q9NY27 417 aa22.73■■□□□ 1.23
GPER1-202ENST00000397088 DNAJC5BQ9UF47 199 aa22.71■■□□□ 1.23
GPER1-202ENST00000397088 CCNB3Q8WWL7 1395 aa22.7■■□□□ 1.22
GPER1-202ENST00000397088 RAB3GAP2Q9H2M9 1393 aa22.68■■□□□ 1.22
GPER1-202ENST00000397088 HNRNPUQ00839 825 aaKnown RBP eCLIP22.68■■□□□ 1.22
GPER1-202ENST00000397088 PAK3O75914 559 aaPredicted RBP22.67■■□□□ 1.22
GPER1-202ENST00000397088 CCDC136Q96JN2 1154 aa22.66■■□□□ 1.22
GPER1-202ENST00000397088 HIRIP3Q9BW71 556 aaPredicted RBP22.65■■□□□ 1.22
GPER1-202ENST00000397088 RTL5Q5HYW3 569 aaPredicted RBP22.65■■□□□ 1.22
GPER1-202ENST00000397088 SIN3AQ96ST3 1273 aa22.61■■□□□ 1.21
GPER1-202ENST00000397088 IL27Q8NEV9 243 aa22.61■■□□□ 1.21
GPER1-202ENST00000397088 SYNJ1O43426 1573 aa22.6■■□□□ 1.21
GPER1-202ENST00000397088 ARAP1Q96P48 1450 aa22.6■■□□□ 1.21
GPER1-202ENST00000397088 UBE2Q2Q8WVN8 375 aa22.58■■□□□ 1.21
GPER1-202ENST00000397088 TIMELESSQ9UNS1 1208 aa22.58■■□□□ 1.2
GPER1-202ENST00000397088 B4GALNT3Q6L9W6 998 aa22.56■■□□□ 1.2
GPER1-202ENST00000397088 RTN4Q9NQC3 1192 aaKnown RBP22.53■■□□□ 1.2
GPER1-202ENST00000397088 SETD5Q9C0A6 1442 aa22.52■■□□□ 1.19
GPER1-202ENST00000397088 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.5■■□□□ 1.19
GPER1-202ENST00000397088 ANP32AP39687 249 aaKnown RBP22.49■■□□□ 1.19
GPER1-202ENST00000397088 IPO9Q96P70 1041 aaKnown RBP22.49■■□□□ 1.19
GPER1-202ENST00000397088 ZBTB47Q9UFB7 747 aaPredicted RBP22.46■■□□□ 1.19
GPER1-202ENST00000397088 CFTRP13569 1480 aa22.42■■□□□ 1.18
GPER1-202ENST00000397088 CADPSQ9ULU8 1353 aa22.4■■□□□ 1.18
GPER1-202ENST00000397088 ERICH3Q5RHP9 1530 aa22.39■■□□□ 1.18
GPER1-202ENST00000397088 NESP48681 1621 aa22.38■■□□□ 1.17
GPER1-202ENST00000397088 WASHC2AQ641Q2 1341 aa22.37■■□□□ 1.17
GPER1-202ENST00000397088 PRXQ9BXM0 1461 aa22.32■■□□□ 1.16
GPER1-202ENST00000397088 TONSLQ96HA7 1378 aa22.29■■□□□ 1.16
GPER1-202ENST00000397088 C11orf95C9JLR9 678 aaPredicted RBP22.28■■□□□ 1.16
GPER1-202ENST00000397088 USP35Q9P2H5 1018 aa22.26■■□□□ 1.15
GPER1-202ENST00000397088 ZBED9Q6R2W3 1325 aa22.25■■□□□ 1.15
GPER1-202ENST00000397088 FAM50AQ14320 339 aaKnown RBP22.24■■□□□ 1.15
GPER1-202ENST00000397088 NEFMP07197 916 aa22.23■■□□□ 1.15
GPER1-202ENST00000397088 WASHC2CQ9Y4E1 1318 aa22.23■■□□□ 1.15
GPER1-202ENST00000397088 PRDM2Q13029 1718 aa22.21■■□□□ 1.15
GPER1-202ENST00000397088 CCDC184Q52MB2 194 aa22.21■■□□□ 1.15
GPER1-202ENST00000397088 ARHGAP35Q9NRY4 1499 aa22.21■■□□□ 1.15
GPER1-202ENST00000397088 FAM9BQ8IZU0 186 aa22.2■■□□□ 1.14
GPER1-202ENST00000397088 EIF5BO60841 1220 aaKnown RBP22.19■■□□□ 1.14
GPER1-202ENST00000397088 FHAD1B1AJZ9 1412 aa22.18■■□□□ 1.14
GPER1-202ENST00000397088 FANCD2Q9BXW9 1451 aa22.18■■□□□ 1.14
GPER1-202ENST00000397088 TOP2BQ02880 1626 aa22.17■■□□□ 1.14
GPER1-202ENST00000397088 LAS1LQ9Y4W2 734 aaKnown RBP22.17■■□□□ 1.14
GPER1-202ENST00000397088 TIAM1Q13009 1591 aa22.16■■□□□ 1.14
GPER1-202ENST00000397088 LAMC3Q9Y6N6 1575 aa22.16■■□□□ 1.14
GPER1-202ENST00000397088 PHLDB1Q86UU1 1377 aa22.16■■□□□ 1.14
GPER1-202ENST00000397088 MAP3K1Q13233 1512 aa22.14■■□□□ 1.13
GPER1-202ENST00000397088 MRS2Q9HD23 443 aa22.13■■□□□ 1.13
GPER1-202ENST00000397088 CUX1P39880 1505 aa22.13■■□□□ 1.13
GPER1-202ENST00000397088 BRPF3Q9ULD4 1205 aa22.11■■□□□ 1.13
GPER1-202ENST00000397088 PPM1GO15355 546 aaPredicted RBP22.1■■□□□ 1.13
GPER1-202ENST00000397088 NPM2Q86SE8 214 aaKnown RBP22.1■■□□□ 1.13
GPER1-202ENST00000397088 LRRC9Q6ZRR7 1453 aa22.1■■□□□ 1.13
GPER1-202ENST00000397088 CNTLNQ9NXG0 1405 aa22.09■■□□□ 1.13
GPER1-202ENST00000397088 AKNAQ7Z591 1439 aa22.08■■□□□ 1.12
GPER1-202ENST00000397088 PRKRIP1Q9H875 184 aaPredicted RBP22.08■■□□□ 1.12
GPER1-202ENST00000397088 HSPA5P11021 654 aaKnown RBP22.07■■□□□ 1.12
GPER1-202ENST00000397088 SMG6Q86US8 1419 aaKnown RBP22.06■■□□□ 1.12
GPER1-202ENST00000397088 NCOA2Q15596 1464 aa22.05■■□□□ 1.12
GPER1-202ENST00000397088 RNF123Q5XPI4 1314 aa22.04■■□□□ 1.12
GPER1-202ENST00000397088 PDS5BQ9NTI5 1447 aa22.04■■□□□ 1.12
GPER1-202ENST00000397088 BIVM-ERCC5R4GMW8 1640 aa22.04■■□□□ 1.12
GPER1-202ENST00000397088 GSE1Q14687 1217 aa22.02■■□□□ 1.12
GPER1-202ENST00000397088 KIF21AQ7Z4S6 1674 aa22.02■■□□□ 1.12
GPER1-202ENST00000397088 NUDCQ9Y266 331 aa22.01■■□□□ 1.11
GPER1-202ENST00000397088 KDM5BQ9UGL1 1544 aa21.97■■□□□ 1.11
GPER1-202ENST00000397088 EIF4G2P78344 907 aaKnown RBP eCLIP21.97■■□□□ 1.11
GPER1-202ENST00000397088 PKNOX2Q96KN3 472 aa21.97■■□□□ 1.11
GPER1-202ENST00000397088 RSPH6AQ9H0K4 717 aa21.97■■□□□ 1.11
GPER1-202ENST00000397088 KIF27Q86VH2 1401 aa21.96■■□□□ 1.11
GPER1-202ENST00000397088 TCERG1O14776 1098 aaKnown RBP21.95■■□□□ 1.11
GPER1-202ENST00000397088 UACAQ9BZF9 1416 aa21.95■■□□□ 1.1
GPER1-202ENST00000397088 CCDC18Q5T9S5 1454 aa21.95■■□□□ 1.1
GPER1-202ENST00000397088 PDE4AP27815 886 aa21.94■■□□□ 1.1
GPER1-202ENST00000397088 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.93■■□□□ 1.1
GPER1-202ENST00000397088 URB2Q14146 1524 aaKnown RBP21.92■■□□□ 1.1
GPER1-202ENST00000397088 FGD5Q6ZNL6 1462 aa21.91■■□□□ 1.1
GPER1-202ENST00000397088 TOPBP1Q92547 1522 aa21.91■■□□□ 1.1
GPER1-202ENST00000397088 CCDC7Q96M83 1385 aa21.89■■□□□ 1.1
GPER1-202ENST00000397088 BACH2Q9BYV9 841 aa21.89■■□□□ 1.09
GPER1-202ENST00000397088 DNMBPQ6XZF7 1577 aa21.89■■□□□ 1.09
GPER1-202ENST00000397088 FRAT1Q92837 279 aaPredicted RBP21.87■■□□□ 1.09
GPER1-202ENST00000397088 NCOA1Q15788 1441 aa21.86■■□□□ 1.09
GPER1-202ENST00000397088 CFAP43Q8NDM7 1665 aa21.86■■□□□ 1.09
GPER1-202ENST00000397088 NFKBIBQ15653 356 aa21.85■■□□□ 1.09
GPER1-202ENST00000397088 DDRGK1Q96HY6 314 aa21.85■■□□□ 1.09
GPER1-202ENST00000397088 MS4A1P11836 297 aa21.84■■□□□ 1.09
GPER1-202ENST00000397088 ERCC6Q03468 1493 aa21.84■■□□□ 1.09
GPER1-202ENST00000397088 FAM43AQ8N2R8 423 aa21.84■■□□□ 1.09
GPER1-202ENST00000397088 HFM1A2PYH4 1435 aa21.83■■□□□ 1.09
GPER1-202ENST00000397088 RAD54L2Q9Y4B4 1467 aa21.82■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms