RNA–Protein interactions for RNA: ENST00000396645.6

HMGN2P46-203, Transcript of high mobility group nucleosomal binding domain 2 pseudogene 46, humanhuman

TSL 1 (best)

Gene HMGN2P46, Length 1,284 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN2P46-203ENST00000396645 CUX2O14529 1486 aa13.61□□□□□ -0.23
HMGN2P46-203ENST00000396645 IFT140Q96RY7 1462 aa13.61□□□□□ -0.23
HMGN2P46-203ENST00000396645 RAD54L2Q9Y4B4 1467 aa13.59□□□□□ -0.23
HMGN2P46-203ENST00000396645 TARBP1Q13395 1621 aaKnown RBP13.58□□□□□ -0.24
HMGN2P46-203ENST00000396645 RUSC2Q8N2Y8 1516 aa13.55□□□□□ -0.24
HMGN2P46-203ENST00000396645 KIF21BO75037 1637 aa13.55□□□□□ -0.24
HMGN2P46-203ENST00000396645 ABCA5Q8WWZ7 1642 aa13.53□□□□□ -0.24
HMGN2P46-203ENST00000396645 CUL7Q14999 1698 aa13.53□□□□□ -0.24
HMGN2P46-203ENST00000396645 GAPVD1Q14C86 1478 aa13.52□□□□□ -0.25
HMGN2P46-203ENST00000396645 ERICH3Q5RHP9 1530 aa13.52□□□□□ -0.25
HMGN2P46-203ENST00000396645 GOLGA3Q08378 1498 aa13.51□□□□□ -0.25
HMGN2P46-203ENST00000396645 PBRM1Q86U86 1689 aa13.5□□□□□ -0.25
HMGN2P46-203ENST00000396645 TDRD9Q8NDG6 1382 aaKnown RBP13.48□□□□□ -0.25
HMGN2P46-203ENST00000396645 IGF1RP08069 1367 aa13.47□□□□□ -0.25
HMGN2P46-203ENST00000396645 GRIN2BQ13224 1484 aa13.47□□□□□ -0.25
HMGN2P46-203ENST00000396645 PRXQ9BXM0 1461 aa13.46□□□□□ -0.25
HMGN2P46-203ENST00000396645 CARMIL1Q5VZK9 1371 aa13.45□□□□□ -0.26
HMGN2P46-203ENST00000396645 EIF4G3O43432 1585 aaKnown RBP13.45□□□□□ -0.26
HMGN2P46-203ENST00000396645 RAPGEF2Q9Y4G8 1499 aa13.45□□□□□ -0.26
HMGN2P46-203ENST00000396645 UBTFP17480 764 aaKnown RBP13.45□□□□□ -0.26
HMGN2P46-203ENST00000396645 LOC105371045A0A1W2PR82 267 aa13.44□□□□□ -0.26
HMGN2P46-203ENST00000396645 ABCB7O75027 752 aa13.44□□□□□ -0.26
HMGN2P46-203ENST00000396645 AQRO60306 1485 aaKnown RBP eCLIP13.42□□□□□ -0.26
HMGN2P46-203ENST00000396645 ZNF608Q9ULD9 1512 aaPredicted RBP13.41□□□□□ -0.26
HMGN2P46-203ENST00000396645 MYCNP04198 464 aaPredicted RBP13.41□□□□□ -0.26
HMGN2P46-203ENST00000396645 TNIKQ9UKE5 1360 aa13.41□□□□□ -0.26
HMGN2P46-203ENST00000396645 FHAD1B1AJZ9 1412 aa13.39□□□□□ -0.27
HMGN2P46-203ENST00000396645 TRHP20396 242 aaPredicted RBP13.39□□□□□ -0.27
HMGN2P46-203ENST00000396645 MAGI1Q96QZ7 1491 aaPredicted RBP13.39□□□□□ -0.27
HMGN2P46-203ENST00000396645 ADAMTS12P58397 1594 aa13.37□□□□□ -0.27
HMGN2P46-203ENST00000396645 SNAPC4Q5SXM2 1469 aa13.35□□□□□ -0.27
HMGN2P46-203ENST00000396645 CTTNBP2Q8WZ74 1663 aa13.34□□□□□ -0.27
HMGN2P46-203ENST00000396645 ZNF219Q9P2Y4 722 aaPredicted RBP13.33□□□□□ -0.28
HMGN2P46-203ENST00000396645 SYNJ2O15056 1496 aa13.32□□□□□ -0.28
HMGN2P46-203ENST00000396645 CHRDL2Q6WN34 429 aa13.3□□□□□ -0.28
HMGN2P46-203ENST00000396645 CHMP7Q8WUX9 453 aaPredicted RBP13.3□□□□□ -0.28
HMGN2P46-203ENST00000396645 CEP162Q5TB80 1403 aa13.3□□□□□ -0.28
HMGN2P46-203ENST00000396645 RBM42Q9BTD8 480 aaKnown RBP13.27□□□□□ -0.29
HMGN2P46-203ENST00000396645 GRIN2AQ12879 1464 aa13.27□□□□□ -0.29
HMGN2P46-203ENST00000396645 CLIP1P30622 1438 aa13.26□□□□□ -0.29
HMGN2P46-203ENST00000396645 APLP2Q06481 763 aa13.25□□□□□ -0.29
HMGN2P46-203ENST00000396645 FBLN2P98095 1184 aa13.24□□□□□ -0.29
HMGN2P46-203ENST00000396645 SP7Q8TDD2 431 aaPredicted RBP13.24□□□□□ -0.29
HMGN2P46-203ENST00000396645 IQGAP2Q13576 1575 aa13.22□□□□□ -0.29
HMGN2P46-203ENST00000396645 EFCAB5A4FU69 1503 aa13.22□□□□□ -0.29
HMGN2P46-203ENST00000396645 CHD1O14646 1710 aa13.22□□□□□ -0.29
HMGN2P46-203ENST00000396645 KIAA0586Q9BVV6 1533 aa13.2□□□□□ -0.3
HMGN2P46-203ENST00000396645 ATF5Q9Y2D1 282 aaPredicted RBP13.19□□□□□ -0.3
HMGN2P46-203ENST00000396645 RANGAP1P46060 587 aaPredicted RBP13.18□□□□□ -0.3
HMGN2P46-203ENST00000396645 NUP160Q12769 1436 aa13.17□□□□□ -0.3
HMGN2P46-203ENST00000396645 SAMD1Q6SPF0 538 aaPredicted RBP13.17□□□□□ -0.3
HMGN2P46-203ENST00000396645 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.16□□□□□ -0.3
HMGN2P46-203ENST00000396645 HNRNPUL2Q1KMD3 747 aaKnown RBP13.16□□□□□ -0.3
HMGN2P46-203ENST00000396645 CEP170Q5SW79 1584 aa13.15□□□□□ -0.3
HMGN2P46-203ENST00000396645 UGGT2Q9NYU1 1516 aa13.13□□□□□ -0.31
HMGN2P46-203ENST00000396645 SAMD9Q5K651 1589 aa13.13□□□□□ -0.31
HMGN2P46-203ENST00000396645 ARHGAP35Q9NRY4 1499 aa13.13□□□□□ -0.31
HMGN2P46-203ENST00000396645 VPS8Q8N3P4 1428 aa13.13□□□□□ -0.31
HMGN2P46-203ENST00000396645 CARMIL2Q6F5E8 1435 aa13.12□□□□□ -0.31
HMGN2P46-203ENST00000396645 FMN1Q68DA7 1419 aa13.1□□□□□ -0.31
HMGN2P46-203ENST00000396645 ARAP1Q96P48 1450 aa13.09□□□□□ -0.31
HMGN2P46-203ENST00000396645 ATXN8OSP0DMR3 200 aa13.08□□□□□ -0.32
HMGN2P46-203ENST00000396645 JPH4Q96JJ6 628 aa13.07□□□□□ -0.32
HMGN2P46-203ENST00000396645 KIAA0556O60303 1618 aa13.06□□□□□ -0.32
HMGN2P46-203ENST00000396645 OSCARQ8IYS5 282 aa13.05□□□□□ -0.32
HMGN2P46-203ENST00000396645 SHROOM2Q13796 1616 aa13.04□□□□□ -0.32
HMGN2P46-203ENST00000396645 FHOD3Q2V2M9 1422 aa13.04□□□□□ -0.32
HMGN2P46-203ENST00000396645 CLASP1Q7Z460 1538 aa13.03□□□□□ -0.32
HMGN2P46-203ENST00000396645 P3H3Q8IVL6 736 aa13.03□□□□□ -0.32
HMGN2P46-203ENST00000396645 DISP1Q96F81 1524 aa13.02□□□□□ -0.33
HMGN2P46-203ENST00000396645 FYCO1Q9BQS8 1478 aa13.01□□□□□ -0.33
HMGN2P46-203ENST00000396645 PRG4Q92954 1404 aaPredicted RBP13□□□□□ -0.33
HMGN2P46-203ENST00000396645 CASKIN1Q8WXD9 1431 aa12.99□□□□□ -0.33
HMGN2P46-203ENST00000396645 HECW1Q76N89 1606 aa12.99□□□□□ -0.33
HMGN2P46-203ENST00000396645 MAP3K1Q13233 1512 aa12.98□□□□□ -0.33
HMGN2P46-203ENST00000396645 PCF11O94913 1555 aaKnown RBP12.97□□□□□ -0.33
HMGN2P46-203ENST00000396645 ATP1B4Q9UN42 357 aaPredicted RBP12.95□□□□□ -0.34
HMGN2P46-203ENST00000396645 CCDC18Q5T9S5 1454 aa12.95□□□□□ -0.34
HMGN2P46-203ENST00000396645 RAPGEF6Q8TEU7 1601 aa12.94□□□□□ -0.34
HMGN2P46-203ENST00000396645 CFAP43Q8NDM7 1665 aa12.93□□□□□ -0.34
HMGN2P46-203ENST00000396645 PTPRGP23470 1445 aa12.93□□□□□ -0.34
HMGN2P46-203ENST00000396645 TIAM1Q13009 1591 aa12.92□□□□□ -0.34
HMGN2P46-203ENST00000396645 CDK11AQ9UQ88 783 aaPredicted RBP12.9□□□□□ -0.34
HMGN2P46-203ENST00000396645 TTBK1Q5TCY1 1321 aaPredicted RBP12.89□□□□□ -0.35
HMGN2P46-203ENST00000396645 ABCA8O94911 1581 aa12.86□□□□□ -0.35
HMGN2P46-203ENST00000396645 POLA2Q14181 598 aa12.86□□□□□ -0.35
HMGN2P46-203ENST00000396645 EPRSP07814 1512 aaKnown RBP12.86□□□□□ -0.35
HMGN2P46-203ENST00000396645 UACAQ9BZF9 1416 aa12.86□□□□□ -0.35
HMGN2P46-203ENST00000396645 MTUS2Q5JR59 1369 aa12.85□□□□□ -0.35
HMGN2P46-203ENST00000396645 TRIM26Q12899 539 aaPredicted RBP12.85□□□□□ -0.35
HMGN2P46-203ENST00000396645 LRRC9Q6ZRR7 1453 aa12.85□□□□□ -0.35
HMGN2P46-203ENST00000396645 PIP4P2Q8N4L2 257 aa12.84□□□□□ -0.35
HMGN2P46-203ENST00000396645 LRRIQ1Q96JM4 1722 aa12.84□□□□□ -0.35
HMGN2P46-203ENST00000396645 PLB1Q6P1J6 1458 aa12.84□□□□□ -0.35
HMGN2P46-203ENST00000396645 EHBP1L1Q8N3D4 1523 aa12.83□□□□□ -0.35
HMGN2P46-203ENST00000396645 ERCC6L2Q5T890 1561 aa12.83□□□□□ -0.36
HMGN2P46-203ENST00000396645 NUP153P49790 1475 aaKnown RBP12.83□□□□□ -0.36
HMGN2P46-203ENST00000396645 ABCC2Q92887 1545 aa12.83□□□□□ -0.36
HMGN2P46-203ENST00000396645 SUPT6HQ7KZ85 1726 aaKnown RBP12.82□□□□□ -0.36
HMGN2P46-203ENST00000396645 UHRF1BP1LA0JNW5 1464 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms