RNA–Protein interactions for RNA: ENST00000396417.2

SEPT3-201, Transcript of septin 3, humanhuman

TSL 1 (best)

Gene SEPT3, Length 1,896 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEPT3-201ENST00000396417 CUX2O14529 1486 aa13.29□□□□□ -0.28
SEPT3-201ENST00000396417 MRC2Q9UBG0 1479 aa13.28□□□□□ -0.28
SEPT3-201ENST00000396417 ERICH3Q5RHP9 1530 aa13.28□□□□□ -0.28
SEPT3-201ENST00000396417 TNIKQ9UKE5 1360 aa13.28□□□□□ -0.28
SEPT3-201ENST00000396417 EHMT2Q96KQ7 1210 aa13.27□□□□□ -0.28
SEPT3-201ENST00000396417 PRXQ9BXM0 1461 aa13.27□□□□□ -0.29
SEPT3-201ENST00000396417 MSH5O43196 834 aa13.25□□□□□ -0.29
SEPT3-201ENST00000396417 RAD54L2Q9Y4B4 1467 aa13.25□□□□□ -0.29
SEPT3-201ENST00000396417 RAPGEF2Q9Y4G8 1499 aa13.24□□□□□ -0.29
SEPT3-201ENST00000396417 WDR62O43379 1518 aa13.24□□□□□ -0.29
SEPT3-201ENST00000396417 DEKP35659 375 aaKnown RBP13.23□□□□□ -0.29
SEPT3-201ENST00000396417 TARBP1Q13395 1621 aaKnown RBP13.22□□□□□ -0.29
SEPT3-201ENST00000396417 CEP162Q5TB80 1403 aa13.21□□□□□ -0.29
SEPT3-201ENST00000396417 ABCA5Q8WWZ7 1642 aa13.21□□□□□ -0.3
SEPT3-201ENST00000396417 THOC2Q8NI27 1593 aaKnown RBP13.2□□□□□ -0.3
SEPT3-201ENST00000396417 UBTFP17480 764 aaKnown RBP13.2□□□□□ -0.3
SEPT3-201ENST00000396417 IGF1RP08069 1367 aa13.2□□□□□ -0.3
SEPT3-201ENST00000396417 CUL7Q14999 1698 aa13.18□□□□□ -0.3
SEPT3-201ENST00000396417 CARMIL1Q5VZK9 1371 aa13.13□□□□□ -0.31
SEPT3-201ENST00000396417 GAPVD1Q14C86 1478 aa13.13□□□□□ -0.31
SEPT3-201ENST00000396417 IFT140Q96RY7 1462 aa13.13□□□□□ -0.31
SEPT3-201ENST00000396417 SALL2Q9Y467 1007 aaPredicted RBP13.13□□□□□ -0.31
SEPT3-201ENST00000396417 FKBP8Q14318 412 aa13.12□□□□□ -0.31
SEPT3-201ENST00000396417 PBRM1Q86U86 1689 aa13.12□□□□□ -0.31
SEPT3-201ENST00000396417 NEFLP07196 543 aa13.1□□□□□ -0.31
SEPT3-201ENST00000396417 TDRD9Q8NDG6 1382 aaKnown RBP13.1□□□□□ -0.31
SEPT3-201ENST00000396417 CLIP1P30622 1438 aa13.1□□□□□ -0.31
SEPT3-201ENST00000396417 SENP3Q9H4L4 574 aaPredicted RBP13.08□□□□□ -0.32
SEPT3-201ENST00000396417 BCANQ96GW7 911 aa13.07□□□□□ -0.32
SEPT3-201ENST00000396417 EIF5BO60841 1220 aaKnown RBP13.06□□□□□ -0.32
SEPT3-201ENST00000396417 CTTNBP2Q8WZ74 1663 aa13.05□□□□□ -0.32
SEPT3-201ENST00000396417 SLC24A1O60721 1099 aa13.04□□□□□ -0.32
SEPT3-201ENST00000396417 EIF4G3O43432 1585 aaKnown RBP13.04□□□□□ -0.32
SEPT3-201ENST00000396417 GRIN2BQ13224 1484 aa13.03□□□□□ -0.32
SEPT3-201ENST00000396417 AQRO60306 1485 aaKnown RBP eCLIP13.03□□□□□ -0.32
SEPT3-201ENST00000396417 ZNF608Q9ULD9 1512 aaPredicted RBP13.02□□□□□ -0.32
SEPT3-201ENST00000396417 ADAMTS12P58397 1594 aa13.02□□□□□ -0.32
SEPT3-201ENST00000396417 VPS8Q8N3P4 1428 aa13□□□□□ -0.33
SEPT3-201ENST00000396417 FHAD1B1AJZ9 1412 aa13□□□□□ -0.33
SEPT3-201ENST00000396417 CDK11AQ9UQ88 783 aaPredicted RBP12.99□□□□□ -0.33
SEPT3-201ENST00000396417 ARAP1Q96P48 1450 aa12.98□□□□□ -0.33
SEPT3-201ENST00000396417 ARHGAP35Q9NRY4 1499 aa12.97□□□□□ -0.33
SEPT3-201ENST00000396417 CCDC136Q96JN2 1154 aa12.94□□□□□ -0.34
SEPT3-201ENST00000396417 EFCAB5A4FU69 1503 aa12.94□□□□□ -0.34
SEPT3-201ENST00000396417 MAGI1Q96QZ7 1491 aaPredicted RBP12.94□□□□□ -0.34
SEPT3-201ENST00000396417 DAXXQ9UER7 740 aaPredicted RBP12.93□□□□□ -0.34
SEPT3-201ENST00000396417 SNAPC4Q5SXM2 1469 aa12.93□□□□□ -0.34
SEPT3-201ENST00000396417 RANGAP1P46060 587 aaPredicted RBP12.93□□□□□ -0.34
SEPT3-201ENST00000396417 PKNOX2Q96KN3 472 aa12.92□□□□□ -0.34
SEPT3-201ENST00000396417 NOP58Q9Y2X3 529 aaKnown RBP12.89□□□□□ -0.35
SEPT3-201ENST00000396417 SAMD9Q5K651 1589 aa12.89□□□□□ -0.35
SEPT3-201ENST00000396417 ITGAEP38570 1179 aa12.89□□□□□ -0.35
SEPT3-201ENST00000396417 GRIN2AQ12879 1464 aa12.88□□□□□ -0.35
SEPT3-201ENST00000396417 IQGAP2Q13576 1575 aa12.88□□□□□ -0.35
SEPT3-201ENST00000396417 SYNJ2O15056 1496 aa12.87□□□□□ -0.35
SEPT3-201ENST00000396417 C11orf95C9JLR9 678 aaPredicted RBP12.85□□□□□ -0.35
SEPT3-201ENST00000396417 RTL5Q5HYW3 569 aaPredicted RBP12.85□□□□□ -0.35
SEPT3-201ENST00000396417 IL27Q8NEV9 243 aa12.84□□□□□ -0.35
SEPT3-201ENST00000396417 CCER2I3L3R5 266 aa12.82□□□□□ -0.36
SEPT3-201ENST00000396417 KIAA0586Q9BVV6 1533 aa12.82□□□□□ -0.36
SEPT3-201ENST00000396417 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.82□□□□□ -0.36
SEPT3-201ENST00000396417 UGGT2Q9NYU1 1516 aa12.81□□□□□ -0.36
SEPT3-201ENST00000396417 MAP3K1Q13233 1512 aa12.81□□□□□ -0.36
SEPT3-201ENST00000396417 FHOD3Q2V2M9 1422 aa12.81□□□□□ -0.36
SEPT3-201ENST00000396417 PHF23Q9BUL5 403 aaPredicted RBP12.8□□□□□ -0.36
SEPT3-201ENST00000396417 PCF11O94913 1555 aaKnown RBP12.8□□□□□ -0.36
SEPT3-201ENST00000396417 CEP170Q5SW79 1584 aa12.8□□□□□ -0.36
SEPT3-201ENST00000396417 KCNH8Q96L42 1107 aa12.8□□□□□ -0.36
SEPT3-201ENST00000396417 FMN1Q68DA7 1419 aa12.8□□□□□ -0.36
SEPT3-201ENST00000396417 DHX57Q6P158 1386 aaKnown RBP12.79□□□□□ -0.36
SEPT3-201ENST00000396417 FYCO1Q9BQS8 1478 aa12.79□□□□□ -0.36
SEPT3-201ENST00000396417 CFAP43Q8NDM7 1665 aa12.79□□□□□ -0.36
SEPT3-201ENST00000396417 HNRNPUL2Q1KMD3 747 aaKnown RBP12.78□□□□□ -0.36
SEPT3-201ENST00000396417 CHMP7Q8WUX9 453 aaPredicted RBP12.78□□□□□ -0.36
SEPT3-201ENST00000396417 NUP160Q12769 1436 aa12.78□□□□□ -0.36
SEPT3-201ENST00000396417 WASHC2AQ641Q2 1341 aa12.78□□□□□ -0.36
SEPT3-201ENST00000396417 NBR1Q14596 966 aa12.78□□□□□ -0.36
SEPT3-201ENST00000396417 TIAM1Q13009 1591 aa12.77□□□□□ -0.37
SEPT3-201ENST00000396417 CHD1O14646 1710 aa12.77□□□□□ -0.37
SEPT3-201ENST00000396417 CASKIN1Q8WXD9 1431 aa12.76□□□□□ -0.37
SEPT3-201ENST00000396417 GLIPR1L2Q4G1C9 344 aa12.76□□□□□ -0.37
SEPT3-201ENST00000396417 P3H3Q8IVL6 736 aa12.76□□□□□ -0.37
SEPT3-201ENST00000396417 PPP4R2Q9NY27 417 aa12.75□□□□□ -0.37
SEPT3-201ENST00000396417 USP35Q9P2H5 1018 aa12.75□□□□□ -0.37
SEPT3-201ENST00000396417 WASHC2CQ9Y4E1 1318 aa12.75□□□□□ -0.37
SEPT3-201ENST00000396417 KIAA0556O60303 1618 aa12.75□□□□□ -0.37
SEPT3-201ENST00000396417 RSPH6AQ9H0K4 717 aa12.73□□□□□ -0.37
SEPT3-201ENST00000396417 DISP1Q96F81 1524 aa12.72□□□□□ -0.37
SEPT3-201ENST00000396417 FBLN2P98095 1184 aa12.72□□□□□ -0.37
SEPT3-201ENST00000396417 RTN4Q9NQC3 1192 aaKnown RBP12.72□□□□□ -0.37
SEPT3-201ENST00000396417 LRRIQ1Q96JM4 1722 aa12.71□□□□□ -0.37
SEPT3-201ENST00000396417 PAK3O75914 559 aaPredicted RBP12.71□□□□□ -0.37
SEPT3-201ENST00000396417 IPO9Q96P70 1041 aaKnown RBP12.7□□□□□ -0.38
SEPT3-201ENST00000396417 LRRC9Q6ZRR7 1453 aa12.69□□□□□ -0.38
SEPT3-201ENST00000396417 KANK4Q5T7N3 995 aaPredicted RBP12.69□□□□□ -0.38
SEPT3-201ENST00000396417 HECW1Q76N89 1606 aa12.69□□□□□ -0.38
SEPT3-201ENST00000396417 PODXL2Q9NZ53 605 aa12.68□□□□□ -0.38
SEPT3-201ENST00000396417 DNAJC5Q9H3Z4 198 aa12.67□□□□□ -0.38
SEPT3-201ENST00000396417 ANP32AP39687 249 aaKnown RBP12.66□□□□□ -0.38
SEPT3-201ENST00000396417 ZBTB47Q9UFB7 747 aaPredicted RBP12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms