RNA–Protein interactions for RNA: ENST00000396208.3

CCP110-202, Transcript of centriolar coiled-coil protein 110, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCP110, Length 5,151 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCP110-202ENST00000396208 NEUROD1Q13562 356 aa10.33□□□□□ -0.76
CCP110-202ENST00000396208 MLECQ14165 292 aa10.32□□□□□ -0.76
CCP110-202ENST00000396208 TDRD9Q8NDG6 1382 aaKnown RBP10.32□□□□□ -0.76
CCP110-202ENST00000396208 GOLGA3Q08378 1498 aa10.31□□□□□ -0.76
CCP110-202ENST00000396208 CCNB3Q8WWL7 1395 aa10.31□□□□□ -0.76
CCP110-202ENST00000396208 FOXD1Q16676 465 aa10.31□□□□□ -0.76
CCP110-202ENST00000396208 A0A0G2JS52 829 aa10.3□□□□□ -0.76
CCP110-202ENST00000396208 JPH4Q96JJ6 628 aa10.3□□□□□ -0.76
CCP110-202ENST00000396208 EID1Q9Y6B2 187 aa10.29□□□□□ -0.76
CCP110-202ENST00000396208 TOP2AP11388 1531 aaKnown RBP10.28□□□□□ -0.76
CCP110-202ENST00000396208 RSPH4AQ5TD94 716 aa10.27□□□□□ -0.77
CCP110-202ENST00000396208 MYT1Q01538 1121 aa10.26□□□□□ -0.77
CCP110-202ENST00000396208 CNGB1Q14028 1251 aaPredicted RBP10.26□□□□□ -0.77
CCP110-202ENST00000396208 CHIC2Q9UKJ5 165 aa10.26□□□□□ -0.77
CCP110-202ENST00000396208 MRC2Q9UBG0 1479 aa10.25□□□□□ -0.77
CCP110-202ENST00000396208 SMARCA4P51532 1647 aa10.25□□□□□ -0.77
CCP110-202ENST00000396208 PTPRGP23470 1445 aa10.25□□□□□ -0.77
CCP110-202ENST00000396208 FAM69CQ0P6D2 419 aa10.24□□□□□ -0.77
CCP110-202ENST00000396208 CDCA8Q53HL2 280 aa10.23□□□□□ -0.77
CCP110-202ENST00000396208 CCDC88BA6NC98 1476 aa10.23□□□□□ -0.77
CCP110-202ENST00000396208 MROH2BQ7Z745 1585 aa10.23□□□□□ -0.77
CCP110-202ENST00000396208 TONSLQ96HA7 1378 aa10.22□□□□□ -0.77
CCP110-202ENST00000396208 CC2D2AQ9P2K1 1620 aa10.22□□□□□ -0.77
CCP110-202ENST00000396208 POGKQ9P215 609 aa10.21□□□□□ -0.78
CCP110-202ENST00000396208 FMN1Q68DA7 1419 aa10.21□□□□□ -0.78
CCP110-202ENST00000396208 IFT140Q96RY7 1462 aa10.2□□□□□ -0.78
CCP110-202ENST00000396208 DCAF8L1A6NGE4 600 aa10.19□□□□□ -0.78
CCP110-202ENST00000396208 GGT6Q6P531 493 aa10.19□□□□□ -0.78
CCP110-202ENST00000396208 ZBTB7CA1YPR0 619 aa10.19□□□□□ -0.78
CCP110-202ENST00000396208 LMOD2Q6P5Q4 547 aa10.19□□□□□ -0.78
CCP110-202ENST00000396208 CEP162Q5TB80 1403 aa10.18□□□□□ -0.78
CCP110-202ENST00000396208 DAXXQ9UER7 740 aaPredicted RBP10.17□□□□□ -0.78
CCP110-202ENST00000396208 ERICH6Q7L0X2 663 aa10.15□□□□□ -0.78
CCP110-202ENST00000396208 SPAG9O60271 1321 aaKnown RBP10.14□□□□□ -0.79
CCP110-202ENST00000396208 GAPVD1Q14C86 1478 aa10.14□□□□□ -0.79
CCP110-202ENST00000396208 HMGXB3Q12766 1538 aa10.14□□□□□ -0.79
CCP110-202ENST00000396208 CANXP27824 592 aaKnown RBP10.14□□□□□ -0.79
CCP110-202ENST00000396208 GRIN2BQ13224 1484 aa10.14□□□□□ -0.79
CCP110-202ENST00000396208 ANP32CO43423 234 aa10.13□□□□□ -0.79
CCP110-202ENST00000396208 RAPGEF2Q9Y4G8 1499 aa10.13□□□□□ -0.79
CCP110-202ENST00000396208 POGZQ7Z3K3 1410 aa10.12□□□□□ -0.79
CCP110-202ENST00000396208 EIF4G2P78344 907 aaKnown RBP eCLIP10.12□□□□□ -0.79
CCP110-202ENST00000396208 CLSPNQ9HAW4 1339 aa10.11□□□□□ -0.79
CCP110-202ENST00000396208 NPHP1O15259 732 aa10.1□□□□□ -0.79
CCP110-202ENST00000396208 RRP7BPQ9NSQ0 103 aa10.1□□□□□ -0.79
CCP110-202ENST00000396208 KDM2AQ9Y2K7 1162 aa10.1□□□□□ -0.79
CCP110-202ENST00000396208 TNIKQ9UKE5 1360 aa10.1□□□□□ -0.79
CCP110-202ENST00000396208 WASHC2CQ9Y4E1 1318 aa10.1□□□□□ -0.79
CCP110-202ENST00000396208 CCDC18Q5T9S5 1454 aa10.09□□□□□ -0.79
CCP110-202ENST00000396208 MEX3CQ5U5Q3 659 aaKnown RBP10.08□□□□□ -0.8
CCP110-202ENST00000396208 CFAP53Q96M91 514 aa10.08□□□□□ -0.8
CCP110-202ENST00000396208 LAMC3Q9Y6N6 1575 aa10.07□□□□□ -0.8
CCP110-202ENST00000396208 PLEKHG5O94827 1062 aa10.07□□□□□ -0.8
CCP110-202ENST00000396208 CCDC9Q9Y3X0 531 aaKnown RBP10.07□□□□□ -0.8
CCP110-202ENST00000396208 TMC1Q8TDI8 760 aa10.06□□□□□ -0.8
CCP110-202ENST00000396208 ANKRD30AQ9BXX3 1397 aa10.06□□□□□ -0.8
CCP110-202ENST00000396208 PHF23Q9BUL5 403 aaPredicted RBP10.06□□□□□ -0.8
CCP110-202ENST00000396208 KIF3BO15066 747 aa10.06□□□□□ -0.8
CCP110-202ENST00000396208 DNAJC5BQ9UF47 199 aa10.05□□□□□ -0.8
CCP110-202ENST00000396208 DMRT2Q9Y5R5 561 aa10.04□□□□□ -0.8
CCP110-202ENST00000396208 RGL3Q3MIN7 710 aa10.04□□□□□ -0.8
CCP110-202ENST00000396208 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.03□□□□□ -0.8
CCP110-202ENST00000396208 TMX4Q9H1E5 349 aaPredicted RBP10.03□□□□□ -0.8
CCP110-202ENST00000396208 FGD5Q6ZNL6 1462 aa10.03□□□□□ -0.8
CCP110-202ENST00000396208 WIZO95785 1651 aa10.02□□□□□ -0.81
CCP110-202ENST00000396208 HMGB2P26583 209 aaKnown RBP10.02□□□□□ -0.81
CCP110-202ENST00000396208 PNNQ9H307 717 aaKnown RBP10.02□□□□□ -0.81
CCP110-202ENST00000396208 SENP3Q9H4L4 574 aaPredicted RBP10.02□□□□□ -0.81
CCP110-202ENST00000396208 WDR43Q15061 677 aaKnown RBP eCLIP10.01□□□□□ -0.81
CCP110-202ENST00000396208 CFTRP13569 1480 aa10.01□□□□□ -0.81
CCP110-202ENST00000396208 NUDCQ9Y266 331 aa10□□□□□ -0.81
CCP110-202ENST00000396208 CSB-PGBD3P0DP91 1061 aa9.99□□□□□ -0.81
CCP110-202ENST00000396208 AQRO60306 1485 aaKnown RBP eCLIP9.99□□□□□ -0.81
CCP110-202ENST00000396208 CHMP4AQ9BY43 222 aa9.99□□□□□ -0.81
CCP110-202ENST00000396208 ARHGAP35Q9NRY4 1499 aa9.98□□□□□ -0.81
CCP110-202ENST00000396208 PRG4Q92954 1404 aaPredicted RBP9.98□□□□□ -0.81
CCP110-202ENST00000396208 HDGFL2Q7Z4V5 671 aaPredicted RBP9.98□□□□□ -0.81
CCP110-202ENST00000396208 ARXQ96QS3 562 aa9.97□□□□□ -0.81
CCP110-202ENST00000396208 SYNJ2O15056 1496 aa9.96□□□□□ -0.81
CCP110-202ENST00000396208 UACAQ9BZF9 1416 aa9.96□□□□□ -0.82
CCP110-202ENST00000396208 ATF3P18847 181 aa9.96□□□□□ -0.82
CCP110-202ENST00000396208 SRPK2P78362 688 aaKnown RBP9.96□□□□□ -0.82
CCP110-202ENST00000396208 SF3B2Q13435 895 aaKnown RBP9.95□□□□□ -0.82
CCP110-202ENST00000396208 YTHDC1Q96MU7 727 aaKnown RBP9.95□□□□□ -0.82
CCP110-202ENST00000396208 KNSTRNQ9Y448 316 aa9.95□□□□□ -0.82
CCP110-202ENST00000396208 PAK3O75914 559 aaPredicted RBP9.94□□□□□ -0.82
CCP110-202ENST00000396208 THEMISQ8N1K5 641 aaPredicted RBP9.93□□□□□ -0.82
CCP110-202ENST00000396208 VGFO15240 615 aaPredicted RBP9.93□□□□□ -0.82
CCP110-202ENST00000396208 SYNJ1O43426 1573 aa9.93□□□□□ -0.82
CCP110-202ENST00000396208 ZNF316A6NFI3 1004 aaPredicted RBP9.92□□□□□ -0.82
CCP110-202ENST00000396208 NESP48681 1621 aa9.92□□□□□ -0.82
CCP110-202ENST00000396208 EIF3AQ14152 1382 aaKnown RBP9.92□□□□□ -0.82
CCP110-202ENST00000396208 RAD54L2Q9Y4B4 1467 aa9.92□□□□□ -0.82
CCP110-202ENST00000396208 NGDNQ8NEJ9 315 aaKnown RBP9.92□□□□□ -0.82
CCP110-202ENST00000396208 CARD11Q9BXL7 1154 aa9.91□□□□□ -0.82
CCP110-202ENST00000396208 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.91□□□□□ -0.82
CCP110-202ENST00000396208 HNRNPMP52272 730 aaKnown RBP eCLIP9.91□□□□□ -0.82
CCP110-202ENST00000396208 TOPBP1Q92547 1522 aa9.9□□□□□ -0.82
CCP110-202ENST00000396208 MAPK8IP3Q9UPT6 1336 aa9.9□□□□□ -0.82
CCP110-202ENST00000396208 MAGI1Q96QZ7 1491 aaPredicted RBP9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms