RNA–Protein interactions for RNA: ENST00000394810.2

SYNPO2L-202, Transcript of synaptopodin 2 like, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNPO2L, Length 4,921 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2L-202ENST00000394810 CARMIL2Q6F5E8 1435 aa20.91■□□□□ 0.94
SYNPO2L-202ENST00000394810 CC2D2AQ9P2K1 1620 aa20.91■□□□□ 0.94
SYNPO2L-202ENST00000394810 CFTRP13569 1480 aa20.91■□□□□ 0.94
SYNPO2L-202ENST00000394810 FMN1Q68DA7 1419 aa20.86■□□□□ 0.93
SYNPO2L-202ENST00000394810 FGD5Q6ZNL6 1462 aa20.85■□□□□ 0.93
SYNPO2L-202ENST00000394810 ANP32CO43423 234 aa20.83■□□□□ 0.93
SYNPO2L-202ENST00000394810 RRP7BPQ9NSQ0 103 aa20.83■□□□□ 0.93
SYNPO2L-202ENST00000394810 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.82■□□□□ 0.92
SYNPO2L-202ENST00000394810 RUSC2Q8N2Y8 1516 aa20.82■□□□□ 0.92
SYNPO2L-202ENST00000394810 CCNB3Q8WWL7 1395 aa20.78■□□□□ 0.92
SYNPO2L-202ENST00000394810 IGF1RP08069 1367 aa20.76■□□□□ 0.91
SYNPO2L-202ENST00000394810 GAPVD1Q14C86 1478 aa20.74■□□□□ 0.91
SYNPO2L-202ENST00000394810 CHGAP10645 457 aaKnown RBP20.73■□□□□ 0.91
SYNPO2L-202ENST00000394810 BCANQ96GW7 911 aa20.72■□□□□ 0.91
SYNPO2L-202ENST00000394810 STAG3Q9UJ98 1225 aa20.71■□□□□ 0.91
SYNPO2L-202ENST00000394810 RAD54L2Q9Y4B4 1467 aa20.71■□□□□ 0.91
SYNPO2L-202ENST00000394810 JPH4Q96JJ6 628 aa20.7■□□□□ 0.9
SYNPO2L-202ENST00000394810 UNC13AQ9UPW8 1703 aa20.7■□□□□ 0.9
SYNPO2L-202ENST00000394810 PEG3Q9GZU2 1588 aa20.68■□□□□ 0.9
SYNPO2L-202ENST00000394810 KANK4Q5T7N3 995 aaPredicted RBP20.67■□□□□ 0.9
SYNPO2L-202ENST00000394810 NESP48681 1621 aa20.66■□□□□ 0.9
SYNPO2L-202ENST00000394810 ARHGAP35Q9NRY4 1499 aa20.66■□□□□ 0.9
SYNPO2L-202ENST00000394810 FHOD3Q2V2M9 1422 aa20.65■□□□□ 0.9
SYNPO2L-202ENST00000394810 CLSPNQ9HAW4 1339 aa20.61■□□□□ 0.89
SYNPO2L-202ENST00000394810 SYNJ1O43426 1573 aa20.59■□□□□ 0.89
SYNPO2L-202ENST00000394810 MRC2Q9UBG0 1479 aa20.59■□□□□ 0.89
SYNPO2L-202ENST00000394810 TOP2BQ02880 1626 aa20.56■□□□□ 0.88
SYNPO2L-202ENST00000394810 TOPBP1Q92547 1522 aa20.55■□□□□ 0.88
SYNPO2L-202ENST00000394810 KDM2AQ9Y2K7 1162 aa20.54■□□□□ 0.88
SYNPO2L-202ENST00000394810 AQRO60306 1485 aaKnown RBP eCLIP20.54■□□□□ 0.88
SYNPO2L-202ENST00000394810 GRIN2BQ13224 1484 aa20.53■□□□□ 0.88
SYNPO2L-202ENST00000394810 CUX1P39880 1505 aa20.52■□□□□ 0.87
SYNPO2L-202ENST00000394810 LAMC3Q9Y6N6 1575 aa20.51■□□□□ 0.87
SYNPO2L-202ENST00000394810 IFT140Q96RY7 1462 aa20.49■□□□□ 0.87
SYNPO2L-202ENST00000394810 EFCAB2Q5VUJ9 269 aa20.49■□□□□ 0.87
SYNPO2L-202ENST00000394810 CCDC18Q5T9S5 1454 aa20.48■□□□□ 0.87
SYNPO2L-202ENST00000394810 ERICH6Q7L0X2 663 aa20.48■□□□□ 0.87
SYNPO2L-202ENST00000394810 SETD5Q9C0A6 1442 aa20.48■□□□□ 0.87
SYNPO2L-202ENST00000394810 POLA1P09884 1462 aaPredicted RBP20.48■□□□□ 0.87
SYNPO2L-202ENST00000394810 ERICH3Q5RHP9 1530 aa20.48■□□□□ 0.87
SYNPO2L-202ENST00000394810 DNMBPQ6XZF7 1577 aa20.47■□□□□ 0.87
SYNPO2L-202ENST00000394810 EIF4G2P78344 907 aaKnown RBP eCLIP20.47■□□□□ 0.87
SYNPO2L-202ENST00000394810 DDX10Q13206 875 aaKnown RBP20.47■□□□□ 0.87
SYNPO2L-202ENST00000394810 PTPRGP23470 1445 aa20.47■□□□□ 0.87
SYNPO2L-202ENST00000394810 KIF21BO75037 1637 aa20.46■□□□□ 0.87
SYNPO2L-202ENST00000394810 OSCARQ8IYS5 282 aa20.44■□□□□ 0.86
SYNPO2L-202ENST00000394810 PLPPR3Q6T4P5 718 aa20.44■□□□□ 0.86
SYNPO2L-202ENST00000394810 DNAJC5BQ9UF47 199 aa20.44■□□□□ 0.86
SYNPO2L-202ENST00000394810 TIMELESSQ9UNS1 1208 aa20.42■□□□□ 0.86
SYNPO2L-202ENST00000394810 RSPH4AQ5TD94 716 aa20.41■□□□□ 0.86
SYNPO2L-202ENST00000394810 PRXQ9BXM0 1461 aa20.4■□□□□ 0.86
SYNPO2L-202ENST00000394810 RGL3Q3MIN7 710 aa20.39■□□□□ 0.86
SYNPO2L-202ENST00000394810 NEFMP07197 916 aa20.38■□□□□ 0.85
SYNPO2L-202ENST00000394810 ARID4BQ4LE39 1312 aaPredicted RBP20.37■□□□□ 0.85
SYNPO2L-202ENST00000394810 KANK1Q14678 1352 aa20.36■□□□□ 0.85
SYNPO2L-202ENST00000394810 ANKRD30AQ9BXX3 1397 aa20.35■□□□□ 0.85
SYNPO2L-202ENST00000394810 SIN3AQ96ST3 1273 aa20.35■□□□□ 0.85
SYNPO2L-202ENST00000394810 ABCA10Q8WWZ4 1543 aa20.31■□□□□ 0.84
SYNPO2L-202ENST00000394810 PPP1R15AO75807 674 aaPredicted RBP20.31■□□□□ 0.84
SYNPO2L-202ENST00000394810 RAB3GAP2Q9H2M9 1393 aa20.3■□□□□ 0.84
SYNPO2L-202ENST00000394810 TRHP20396 242 aaPredicted RBP20.26■□□□□ 0.83
SYNPO2L-202ENST00000394810 HIRIP3Q9BW71 556 aaPredicted RBP20.26■□□□□ 0.83
SYNPO2L-202ENST00000394810 CARD11Q9BXL7 1154 aa20.24■□□□□ 0.83
SYNPO2L-202ENST00000394810 CASKIN1Q8WXD9 1431 aa20.24■□□□□ 0.83
SYNPO2L-202ENST00000394810 HNRNPMP52272 730 aaKnown RBP eCLIP20.24■□□□□ 0.83
SYNPO2L-202ENST00000394810 PKD2Q13563 968 aa20.23■□□□□ 0.83
SYNPO2L-202ENST00000394810 CDCA8Q53HL2 280 aa20.23■□□□□ 0.83
SYNPO2L-202ENST00000394810 MPHOSPH9Q99550 1183 aa20.22■□□□□ 0.83
SYNPO2L-202ENST00000394810 EFCAB5A4FU69 1503 aa20.22■□□□□ 0.83
SYNPO2L-202ENST00000394810 TMC1Q8TDI8 760 aa20.21■□□□□ 0.83
SYNPO2L-202ENST00000394810 SPAG9O60271 1321 aaKnown RBP20.21■□□□□ 0.83
SYNPO2L-202ENST00000394810 NUP155O75694 1391 aa20.21■□□□□ 0.83
SYNPO2L-202ENST00000394810 SNAPC4Q5SXM2 1469 aa20.2■□□□□ 0.82
SYNPO2L-202ENST00000394810 ARAP1Q96P48 1450 aa20.18■□□□□ 0.82
SYNPO2L-202ENST00000394810 GGT6Q6P531 493 aa20.18■□□□□ 0.82
SYNPO2L-202ENST00000394810 CYB5RLQ6IPT4 315 aa20.15■□□□□ 0.82
SYNPO2L-202ENST00000394810 DCAF11Q8TEB1 546 aa20.15■□□□□ 0.82
SYNPO2L-202ENST00000394810 SLC24A1O60721 1099 aa20.15■□□□□ 0.82
SYNPO2L-202ENST00000394810 FAM9BQ8IZU0 186 aa20.15■□□□□ 0.82
SYNPO2L-202ENST00000394810 FYCO1Q9BQS8 1478 aa20.15■□□□□ 0.82
SYNPO2L-202ENST00000394810 URB2Q14146 1524 aaKnown RBP20.15■□□□□ 0.82
SYNPO2L-202ENST00000394810 LRRC9Q6ZRR7 1453 aa20.14■□□□□ 0.82
SYNPO2L-202ENST00000394810 HNRNPUQ00839 825 aaKnown RBP eCLIP20.14■□□□□ 0.81
SYNPO2L-202ENST00000394810 MRS2Q9HD23 443 aa20.14■□□□□ 0.81
SYNPO2L-202ENST00000394810 GTF3C3Q9Y5Q9 886 aa20.14■□□□□ 0.81
SYNPO2L-202ENST00000394810 PRG4Q92954 1404 aaPredicted RBP20.14■□□□□ 0.81
SYNPO2L-202ENST00000394810 MIER1Q8N108 512 aa20.12■□□□□ 0.81
SYNPO2L-202ENST00000394810 BIVM-ERCC5R4GMW8 1640 aa20.11■□□□□ 0.81
SYNPO2L-202ENST00000394810 DAXXQ9UER7 740 aaPredicted RBP20.11■□□□□ 0.81
SYNPO2L-202ENST00000394810 KIF3BO15066 747 aa20.11■□□□□ 0.81
SYNPO2L-202ENST00000394810 MYOM3Q5VTT5 1437 aa20.11■□□□□ 0.81
SYNPO2L-202ENST00000394810 KIAA0586Q9BVV6 1533 aa20.11■□□□□ 0.81
SYNPO2L-202ENST00000394810 HDGFP51858 240 aaKnown RBP20.1■□□□□ 0.81
SYNPO2L-202ENST00000394810 MLECQ14165 292 aa20.09■□□□□ 0.81
SYNPO2L-202ENST00000394810 FGD6Q6ZV73 1430 aa20.09■□□□□ 0.81
SYNPO2L-202ENST00000394810 CANXP27824 592 aaKnown RBP20.08■□□□□ 0.8
SYNPO2L-202ENST00000394810 CUL7Q14999 1698 aa20.07■□□□□ 0.8
SYNPO2L-202ENST00000394810 FOXD1Q16676 465 aa20.07■□□□□ 0.8
SYNPO2L-202ENST00000394810 WDR43Q15061 677 aaKnown RBP eCLIP20.07■□□□□ 0.8
SYNPO2L-202ENST00000394810 SYNJ2O15056 1496 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms