RNA–Protein interactions for RNA: ENST00000394555.6

EFEMP1-202, Transcript of EGF containing fibulin extracellular matrix protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFEMP1, Length 3,024 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFEMP1-202ENST00000394555 ARHGAP35Q9NRY4 1499 aa23.19■■□□□ 1.3
EFEMP1-202ENST00000394555 ANP32CO43423 234 aa23.18■■□□□ 1.3
EFEMP1-202ENST00000394555 SETD5Q9C0A6 1442 aa23.17■■□□□ 1.3
EFEMP1-202ENST00000394555 KIF27Q86VH2 1401 aa23.16■■□□□ 1.3
EFEMP1-202ENST00000394555 BIVM-ERCC5R4GMW8 1640 aa23.14■■□□□ 1.3
EFEMP1-202ENST00000394555 ATP1B4Q9UN42 357 aaPredicted RBP23.14■■□□□ 1.29
EFEMP1-202ENST00000394555 CCER2I3L3R5 266 aa23.07■■□□□ 1.28
EFEMP1-202ENST00000394555 CUX1P39880 1505 aa23.06■■□□□ 1.28
EFEMP1-202ENST00000394555 PHLDB1Q86UU1 1377 aa23.05■■□□□ 1.28
EFEMP1-202ENST00000394555 IRX6P78412 446 aaPredicted RBP23.05■■□□□ 1.28
EFEMP1-202ENST00000394555 P3H3Q8IVL6 736 aa23.04■■□□□ 1.28
EFEMP1-202ENST00000394555 MSH5O43196 834 aa23.04■■□□□ 1.28
EFEMP1-202ENST00000394555 TIAM1Q13009 1591 aa22.99■■□□□ 1.27
EFEMP1-202ENST00000394555 LRRC9Q6ZRR7 1453 aa22.96■■□□□ 1.27
EFEMP1-202ENST00000394555 HNRNPUQ00839 825 aaKnown RBP eCLIP22.96■■□□□ 1.27
EFEMP1-202ENST00000394555 TIMELESSQ9UNS1 1208 aa22.95■■□□□ 1.27
EFEMP1-202ENST00000394555 ERICH6Q7L0X2 663 aa22.94■■□□□ 1.26
EFEMP1-202ENST00000394555 CDK11AQ9UQ88 783 aaPredicted RBP22.92■■□□□ 1.26
EFEMP1-202ENST00000394555 TONSLQ96HA7 1378 aa22.91■■□□□ 1.26
EFEMP1-202ENST00000394555 IGF1RP08069 1367 aa22.89■■□□□ 1.25
EFEMP1-202ENST00000394555 CARMIL1Q5VZK9 1371 aa22.84■■□□□ 1.25
EFEMP1-202ENST00000394555 MAP3K1Q13233 1512 aa22.84■■□□□ 1.25
EFEMP1-202ENST00000394555 FANCIQ9NVI1 1328 aa22.81■■□□□ 1.24
EFEMP1-202ENST00000394555 FHAD1B1AJZ9 1412 aa22.78■■□□□ 1.24
EFEMP1-202ENST00000394555 CFTRP13569 1480 aa22.73■■□□□ 1.23
EFEMP1-202ENST00000394555 FHOD3Q2V2M9 1422 aa22.73■■□□□ 1.23
EFEMP1-202ENST00000394555 PCF11O94913 1555 aaKnown RBP22.72■■□□□ 1.23
EFEMP1-202ENST00000394555 NCAPD3P42695 1498 aa22.68■■□□□ 1.22
EFEMP1-202ENST00000394555 CCDC18Q5T9S5 1454 aa22.68■■□□□ 1.22
EFEMP1-202ENST00000394555 B4GALNT3Q6L9W6 998 aa22.67■■□□□ 1.22
EFEMP1-202ENST00000394555 CCDC184Q52MB2 194 aa22.67■■□□□ 1.22
EFEMP1-202ENST00000394555 PPP4R2Q9NY27 417 aa22.66■■□□□ 1.22
EFEMP1-202ENST00000394555 FAM9BQ8IZU0 186 aa22.66■■□□□ 1.22
EFEMP1-202ENST00000394555 HSPA5P11021 654 aaKnown RBP22.65■■□□□ 1.22
EFEMP1-202ENST00000394555 WASHC2AQ641Q2 1341 aa22.65■■□□□ 1.22
EFEMP1-202ENST00000394555 CFAP43Q8NDM7 1665 aa22.64■■□□□ 1.22
EFEMP1-202ENST00000394555 HMGXB3Q12766 1538 aa22.63■■□□□ 1.21
EFEMP1-202ENST00000394555 FGD6Q6ZV73 1430 aa22.61■■□□□ 1.21
EFEMP1-202ENST00000394555 UACAQ9BZF9 1416 aa22.6■■□□□ 1.21
EFEMP1-202ENST00000394555 PTPRKQ15262 1439 aa22.6■■□□□ 1.21
EFEMP1-202ENST00000394555 FGD5Q6ZNL6 1462 aa22.6■■□□□ 1.21
EFEMP1-202ENST00000394555 MTUS2Q5JR59 1369 aa22.58■■□□□ 1.2
EFEMP1-202ENST00000394555 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.57■■□□□ 1.2
EFEMP1-202ENST00000394555 DEKP35659 375 aaKnown RBP22.56■■□□□ 1.2
EFEMP1-202ENST00000394555 ERICH6BQ5W0A0 696 aa22.55■■□□□ 1.2
EFEMP1-202ENST00000394555 MRS2Q9HD23 443 aa22.55■■□□□ 1.2
EFEMP1-202ENST00000394555 RRP7BPQ9NSQ0 103 aa22.55■■□□□ 1.2
EFEMP1-202ENST00000394555 CHIC2Q9UKJ5 165 aa22.55■■□□□ 1.2
EFEMP1-202ENST00000394555 FYCO1Q9BQS8 1478 aa22.55■■□□□ 1.2
EFEMP1-202ENST00000394555 HFM1A2PYH4 1435 aa22.54■■□□□ 1.2
EFEMP1-202ENST00000394555 AQRO60306 1485 aaKnown RBP eCLIP22.54■■□□□ 1.2
EFEMP1-202ENST00000394555 EIF4G2P78344 907 aaKnown RBP eCLIP22.54■■□□□ 1.2
EFEMP1-202ENST00000394555 CASKIN1Q8WXD9 1431 aa22.54■■□□□ 1.2
EFEMP1-202ENST00000394555 NBR1Q14596 966 aa22.53■■□□□ 1.2
EFEMP1-202ENST00000394555 CNGB1Q14028 1251 aaPredicted RBP22.52■■□□□ 1.2
EFEMP1-202ENST00000394555 NAIPQ13075 1403 aa22.5■■□□□ 1.19
EFEMP1-202ENST00000394555 PTPN23Q9H3S7 1636 aa22.5■■□□□ 1.19
EFEMP1-202ENST00000394555 C11orf95C9JLR9 678 aaPredicted RBP22.48■■□□□ 1.19
EFEMP1-202ENST00000394555 PRKRIP1Q9H875 184 aaPredicted RBP22.48■■□□□ 1.19
EFEMP1-202ENST00000394555 KDM5BQ9UGL1 1544 aa22.46■■□□□ 1.19
EFEMP1-202ENST00000394555 MYT1LQ9UL68 1186 aa22.44■■□□□ 1.18
EFEMP1-202ENST00000394555 NOP58Q9Y2X3 529 aaKnown RBP22.44■■□□□ 1.18
EFEMP1-202ENST00000394555 FOXD1Q16676 465 aa22.44■■□□□ 1.18
EFEMP1-202ENST00000394555 FMN1Q68DA7 1419 aa22.44■■□□□ 1.18
EFEMP1-202ENST00000394555 CNTLNQ9NXG0 1405 aa22.44■■□□□ 1.18
EFEMP1-202ENST00000394555 CADPSQ9ULU8 1353 aa22.44■■□□□ 1.18
EFEMP1-202ENST00000394555 PAK3O75914 559 aaPredicted RBP22.44■■□□□ 1.18
EFEMP1-202ENST00000394555 SENP3-EIF4A1A0A087X0R7 540 aa22.42■■□□□ 1.18
EFEMP1-202ENST00000394555 L3MBTL2Q969R5 705 aa22.41■■□□□ 1.18
EFEMP1-202ENST00000394555 ZBED9Q6R2W3 1325 aa22.41■■□□□ 1.18
EFEMP1-202ENST00000394555 RAD54L2Q9Y4B4 1467 aa22.41■■□□□ 1.18
EFEMP1-202ENST00000394555 NCOA2Q15596 1464 aa22.38■■□□□ 1.17
EFEMP1-202ENST00000394555 EFCAB5A4FU69 1503 aa22.38■■□□□ 1.17
EFEMP1-202ENST00000394555 MYOM3Q5VTT5 1437 aa22.37■■□□□ 1.17
EFEMP1-202ENST00000394555 CCDC7Q96M83 1385 aa22.36■■□□□ 1.17
EFEMP1-202ENST00000394555 MPHOSPH9Q99550 1183 aa22.34■■□□□ 1.17
EFEMP1-202ENST00000394555 POLR3GLQ9BT43 218 aa22.34■■□□□ 1.17
EFEMP1-202ENST00000394555 PRDM2Q13029 1718 aa22.33■■□□□ 1.17
EFEMP1-202ENST00000394555 SNAPC4Q5SXM2 1469 aa22.33■■□□□ 1.16
EFEMP1-202ENST00000394555 CCDC136Q96JN2 1154 aa22.32■■□□□ 1.16
EFEMP1-202ENST00000394555 AKNAQ7Z591 1439 aa22.31■■□□□ 1.16
EFEMP1-202ENST00000394555 NBPF8Q3BBV2 869 aa22.29■■□□□ 1.16
EFEMP1-202ENST00000394555 NCOA1Q15788 1441 aa22.29■■□□□ 1.16
EFEMP1-202ENST00000394555 ANP32AP39687 249 aaKnown RBP22.28■■□□□ 1.16
EFEMP1-202ENST00000394555 ARID3CA6NKF2 412 aa22.28■■□□□ 1.16
EFEMP1-202ENST00000394555 DENND4BO75064 1496 aaPredicted RBP22.28■■□□□ 1.16
EFEMP1-202ENST00000394555 KIF7Q2M1P5 1343 aa22.27■■□□□ 1.16
EFEMP1-202ENST00000394555 FANCD2Q9BXW9 1451 aa22.25■■□□□ 1.15
EFEMP1-202ENST00000394555 RTL5Q5HYW3 569 aaPredicted RBP22.23■■□□□ 1.15
EFEMP1-202ENST00000394555 ZBTB47Q9UFB7 747 aaPredicted RBP22.23■■□□□ 1.15
EFEMP1-202ENST00000394555 IPO9Q96P70 1041 aaKnown RBP22.22■■□□□ 1.15
EFEMP1-202ENST00000394555 CTTNBP2Q8WZ74 1663 aa22.21■■□□□ 1.15
EFEMP1-202ENST00000394555 SUPT6HQ7KZ85 1726 aaKnown RBP22.21■■□□□ 1.15
EFEMP1-202ENST00000394555 KDM6BO15054 1643 aa22.21■■□□□ 1.15
EFEMP1-202ENST00000394555 POLA1P09884 1462 aaPredicted RBP22.21■■□□□ 1.15
EFEMP1-202ENST00000394555 ABCA10Q8WWZ4 1543 aa22.21■■□□□ 1.15
EFEMP1-202ENST00000394555 LRRIQ1Q96JM4 1722 aa22.2■■□□□ 1.14
EFEMP1-202ENST00000394555 NUDCQ9Y266 331 aa22.2■■□□□ 1.14
EFEMP1-202ENST00000394555 ZNF326Q5BKZ1 582 aaKnown RBP22.18■■□□□ 1.14
EFEMP1-202ENST00000394555 GRIN2BQ13224 1484 aa22.17■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms