RNA–Protein interactions for RNA: ENST00000393606.7

UBTF-203, Transcript of upstream binding transcription factor, humanhuman

TSL 1 (best) BASIC

Gene UBTF, Length 2,683 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBTF-203ENST00000393606 DNAJC5BQ9UF47 199 aa28.34■■■□□ 2.13
UBTF-203ENST00000393606 FHOD3Q2V2M9 1422 aa28.29■■■□□ 2.12
UBTF-203ENST00000393606 POLA1P09884 1462 aaPredicted RBP28.28■■■□□ 2.12
UBTF-203ENST00000393606 TIAM1Q13009 1591 aa28.28■■■□□ 2.12
UBTF-203ENST00000393606 TOPBP1Q92547 1522 aa28.27■■■□□ 2.12
UBTF-203ENST00000393606 PHLDB1Q86UU1 1377 aa28.26■■■□□ 2.11
UBTF-203ENST00000393606 RAB3GAP2Q9H2M9 1393 aa28.25■■■□□ 2.11
UBTF-203ENST00000393606 CLSPNQ9HAW4 1339 aa28.25■■■□□ 2.11
UBTF-203ENST00000393606 LRRC9Q6ZRR7 1453 aa28.22■■■□□ 2.11
UBTF-203ENST00000393606 DNMBPQ6XZF7 1577 aa28.22■■■□□ 2.11
UBTF-203ENST00000393606 TDRD9Q8NDG6 1382 aaKnown RBP28.2■■■□□ 2.11
UBTF-203ENST00000393606 PCF11O94913 1555 aaKnown RBP28.17■■■□□ 2.1
UBTF-203ENST00000393606 ABCA10Q8WWZ4 1543 aa28.16■■■□□ 2.1
UBTF-203ENST00000393606 FHAD1B1AJZ9 1412 aa28.15■■■□□ 2.1
UBTF-203ENST00000393606 SIN3AQ96ST3 1273 aa28.12■■■□□ 2.09
UBTF-203ENST00000393606 URB2Q14146 1524 aaKnown RBP28.09■■■□□ 2.09
UBTF-203ENST00000393606 SETD5Q9C0A6 1442 aa28.07■■■□□ 2.08
UBTF-203ENST00000393606 MAP3K1Q13233 1512 aa28.04■■■□□ 2.08
UBTF-203ENST00000393606 MAPKBP1O60336 1514 aa28■■■□□ 2.07
UBTF-203ENST00000393606 CFAP43Q8NDM7 1665 aa27.96■■■□□ 2.07
UBTF-203ENST00000393606 CASKIN1Q8WXD9 1431 aa27.94■■■□□ 2.06
UBTF-203ENST00000393606 HIRIP3Q9BW71 556 aaPredicted RBP27.94■■■□□ 2.06
UBTF-203ENST00000393606 CUL7Q14999 1698 aa27.93■■■□□ 2.06
UBTF-203ENST00000393606 ARID3CA6NKF2 412 aa27.93■■■□□ 2.06
UBTF-203ENST00000393606 FYCO1Q9BQS8 1478 aa27.93■■■□□ 2.06
UBTF-203ENST00000393606 CTTNBP2Q8WZ74 1663 aa27.92■■■□□ 2.06
UBTF-203ENST00000393606 GAPVD1Q14C86 1478 aa27.92■■■□□ 2.06
UBTF-203ENST00000393606 LAMC3Q9Y6N6 1575 aa27.92■■■□□ 2.06
UBTF-203ENST00000393606 MTUS2Q5JR59 1369 aa27.91■■■□□ 2.06
UBTF-203ENST00000393606 EFCAB5A4FU69 1503 aa27.89■■■□□ 2.05
UBTF-203ENST00000393606 PDS5BQ9NTI5 1447 aa27.87■■■□□ 2.05
UBTF-203ENST00000393606 FMN1Q68DA7 1419 aa27.86■■■□□ 2.05
UBTF-203ENST00000393606 KCNH8Q96L42 1107 aa27.85■■■□□ 2.05
UBTF-203ENST00000393606 KIF21AQ7Z4S6 1674 aa27.83■■■□□ 2.05
UBTF-203ENST00000393606 WDR97A6NE52 1622 aa27.82■■■□□ 2.04
UBTF-203ENST00000393606 DDX10Q13206 875 aaKnown RBP27.81■■■□□ 2.04
UBTF-203ENST00000393606 SNAPC4Q5SXM2 1469 aa27.79■■■□□ 2.04
UBTF-203ENST00000393606 SUPT16HQ9Y5B9 1047 aaKnown RBP27.79■■■□□ 2.04
UBTF-203ENST00000393606 ABCA5Q8WWZ7 1642 aa27.79■■■□□ 2.04
UBTF-203ENST00000393606 FGD6Q6ZV73 1430 aa27.78■■■□□ 2.04
UBTF-203ENST00000393606 AQRO60306 1485 aaKnown RBP eCLIP27.77■■■□□ 2.042e-7■■■■■ 29.9
UBTF-203ENST00000393606 CHIC2Q9UKJ5 165 aa27.75■■■□□ 2.03
UBTF-203ENST00000393606 BCL11AQ9H165 835 aa27.74■■■□□ 2.03
UBTF-203ENST00000393606 PTPRKQ15262 1439 aa27.73■■■□□ 2.03
UBTF-203ENST00000393606 LRRIQ1Q96JM4 1722 aa27.71■■■□□ 2.03
UBTF-203ENST00000393606 RRP7BPQ9NSQ0 103 aa27.68■■■□□ 2.02
UBTF-203ENST00000393606 NCOA2Q15596 1464 aa27.68■■■□□ 2.02
UBTF-203ENST00000393606 SAMD9Q5K651 1589 aa27.66■■■□□ 2.02
UBTF-203ENST00000393606 PPP1R15AO75807 674 aaPredicted RBP27.64■■■□□ 2.02
UBTF-203ENST00000393606 GRIN2BQ13224 1484 aa27.64■■■□□ 2.01
UBTF-203ENST00000393606 CCDC18Q5T9S5 1454 aa27.64■■■□□ 2.01
UBTF-203ENST00000393606 TARBP1Q13395 1621 aaKnown RBP27.61■■■□□ 2.01
UBTF-203ENST00000393606 MYOM3Q5VTT5 1437 aa27.6■■■□□ 2.01
UBTF-203ENST00000393606 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.59■■■□□ 2.012e-7■■■□□ 16
UBTF-203ENST00000393606 TONSLQ96HA7 1378 aa27.59■■■□□ 2.01
UBTF-203ENST00000393606 MAGI3Q5TCQ9 1506 aa27.57■■■□□ 2
UBTF-203ENST00000393606 TRIM52Q96A61 297 aa27.56■■■□□ 2
UBTF-203ENST00000393606 HFM1A2PYH4 1435 aa27.52■■■□□ 2
UBTF-203ENST00000393606 SUPT6HQ7KZ85 1726 aaKnown RBP27.52■■■□□ 2
UBTF-203ENST00000393606 NAIPQ13075 1403 aa27.52■■■□□ 2
UBTF-203ENST00000393606 ANP32EQ9BTT0 268 aa27.51■■□□□ 1.99
UBTF-203ENST00000393606 PTPN23Q9H3S7 1636 aa27.51■■□□□ 1.99
UBTF-203ENST00000393606 CDK13Q14004 1512 aaKnown RBP27.5■■□□□ 1.99
UBTF-203ENST00000393606 PBRM1Q86U86 1689 aa27.5■■□□□ 1.99
UBTF-203ENST00000393606 ZNF608Q9ULD9 1512 aaPredicted RBP27.49■■□□□ 1.99
UBTF-203ENST00000393606 TIMELESSQ9UNS1 1208 aa27.48■■□□□ 1.99
UBTF-203ENST00000393606 UACAQ9BZF9 1416 aa27.47■■□□□ 1.99
UBTF-203ENST00000393606 EHBP1L1Q8N3D4 1523 aa27.47■■□□□ 1.99
UBTF-203ENST00000393606 FOXD1Q16676 465 aa27.45■■□□□ 1.98
UBTF-203ENST00000393606 IQGAP2Q13576 1575 aa27.45■■□□□ 1.98
UBTF-203ENST00000393606 MRC2Q9UBG0 1479 aa27.43■■□□□ 1.98
UBTF-203ENST00000393606 TSHZ2Q9NRE2 1034 aa27.43■■□□□ 1.98
UBTF-203ENST00000393606 UGGT2Q9NYU1 1516 aa27.42■■□□□ 1.98
UBTF-203ENST00000393606 EPRSP07814 1512 aaKnown RBP27.41■■□□□ 1.98
UBTF-203ENST00000393606 FBLN2P98095 1184 aa27.4■■□□□ 1.98
UBTF-203ENST00000393606 BCANQ96GW7 911 aa27.4■■□□□ 1.98
UBTF-203ENST00000393606 ADAMTS12P58397 1594 aa27.39■■□□□ 1.97
UBTF-203ENST00000393606 THOC2Q8NI27 1593 aaKnown RBP27.37■■□□□ 1.97
UBTF-203ENST00000393606 HECW1Q76N89 1606 aa27.36■■□□□ 1.97
UBTF-203ENST00000393606 ANP32CO43423 234 aa27.36■■□□□ 1.97
UBTF-203ENST00000393606 ZNF644Q9H582 1327 aaPredicted RBP27.35■■□□□ 1.97
UBTF-203ENST00000393606 KDM6BO15054 1643 aa27.32■■□□□ 1.96
UBTF-203ENST00000393606 ARHGEF11O15085 1522 aa27.31■■□□□ 1.96
UBTF-203ENST00000393606 FKBP8Q14318 412 aa27.28■■□□□ 1.96
UBTF-203ENST00000393606 MPHOSPH9Q99550 1183 aa27.28■■□□□ 1.96
UBTF-203ENST00000393606 WDR62O43379 1518 aa27.26■■□□□ 1.95
UBTF-203ENST00000393606 CHMP7Q8WUX9 453 aaPredicted RBP27.24■■□□□ 1.95
UBTF-203ENST00000393606 ZNF777Q9ULD5 760 aaPredicted RBP27.24■■□□□ 1.95
UBTF-203ENST00000393606 IFT140Q96RY7 1462 aa27.23■■□□□ 1.95
UBTF-203ENST00000393606 TCOF1Q13428 1488 aaKnown RBP27.22■■□□□ 1.95
UBTF-203ENST00000393606 DENND4BO75064 1496 aaPredicted RBP27.21■■□□□ 1.95
UBTF-203ENST00000393606 HSPA5P11021 654 aaKnown RBP27.21■■□□□ 1.95
UBTF-203ENST00000393606 DISP1Q96F81 1524 aa27.19■■□□□ 1.94
UBTF-203ENST00000393606 ERCC6Q03468 1493 aa27.19■■□□□ 1.94
UBTF-203ENST00000393606 L3MBTL2Q969R5 705 aa27.18■■□□□ 1.94
UBTF-203ENST00000393606 KIAA0586Q9BVV6 1533 aa27.16■■□□□ 1.94
UBTF-203ENST00000393606 KDM5BQ9UGL1 1544 aa27.15■■□□□ 1.94
UBTF-203ENST00000393606 NUP153P49790 1475 aaKnown RBP27.14■■□□□ 1.94
UBTF-203ENST00000393606 MIA2Q96PC5 1412 aa27.14■■□□□ 1.94
UBTF-203ENST00000393606 KIAA0556O60303 1618 aa27.14■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms