RNA–Protein interactions for RNA: ENST00000393459.5

SFXN3-202, Transcript of sideroflexin 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SFXN3, Length 3,098 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-202ENST00000393459 FAM50AQ14320 339 aaKnown RBP20.64■□□□□ 0.89
SFXN3-202ENST00000393459 RAPGEF2Q9Y4G8 1499 aa20.62■□□□□ 0.89
SFXN3-202ENST00000393459 KIF27Q86VH2 1401 aa20.6■□□□□ 0.89
SFXN3-202ENST00000393459 VPS8Q8N3P4 1428 aa20.6■□□□□ 0.89
SFXN3-202ENST00000393459 FANCD2Q9BXW9 1451 aa20.59■□□□□ 0.89
SFXN3-202ENST00000393459 P3H3Q8IVL6 736 aa20.57■□□□□ 0.88
SFXN3-202ENST00000393459 CLSPNQ9HAW4 1339 aa20.55■□□□□ 0.88
SFXN3-202ENST00000393459 NBR1Q14596 966 aa20.54■□□□□ 0.88
SFXN3-202ENST00000393459 ERICH3Q5RHP9 1530 aa20.54■□□□□ 0.88
SFXN3-202ENST00000393459 PRXQ9BXM0 1461 aa20.53■□□□□ 0.88
SFXN3-202ENST00000393459 HNRNPUQ00839 825 aaKnown RBP eCLIP20.52■□□□□ 0.88
SFXN3-202ENST00000393459 LAMC3Q9Y6N6 1575 aa20.52■□□□□ 0.88
SFXN3-202ENST00000393459 ANP32CO43423 234 aa20.5■□□□□ 0.87
SFXN3-202ENST00000393459 FGD5Q6ZNL6 1462 aa20.48■□□□□ 0.87
SFXN3-202ENST00000393459 NESP48681 1621 aa20.48■□□□□ 0.87
SFXN3-202ENST00000393459 DNMBPQ6XZF7 1577 aa20.45■□□□□ 0.86
SFXN3-202ENST00000393459 CUX2O14529 1486 aa20.45■□□□□ 0.86
SFXN3-202ENST00000393459 CDK11AQ9UQ88 783 aaPredicted RBP20.41■□□□□ 0.86
SFXN3-202ENST00000393459 RAB3GAP2Q9H2M9 1393 aa20.4■□□□□ 0.86
SFXN3-202ENST00000393459 PDS5BQ9NTI5 1447 aa20.4■□□□□ 0.86
SFXN3-202ENST00000393459 TOPBP1Q92547 1522 aa20.39■□□□□ 0.86
SFXN3-202ENST00000393459 B4GALNT3Q6L9W6 998 aa20.39■□□□□ 0.85
SFXN3-202ENST00000393459 IGF1RP08069 1367 aa20.37■□□□□ 0.85
SFXN3-202ENST00000393459 DNAJC5BQ9UF47 199 aa20.34■□□□□ 0.85
SFXN3-202ENST00000393459 FAM9BQ8IZU0 186 aa20.33■□□□□ 0.85
SFXN3-202ENST00000393459 POLA1P09884 1462 aaPredicted RBP20.33■□□□□ 0.84
SFXN3-202ENST00000393459 CCNB3Q8WWL7 1395 aa20.33■□□□□ 0.84
SFXN3-202ENST00000393459 ABCA10Q8WWZ4 1543 aa20.31■□□□□ 0.84
SFXN3-202ENST00000393459 RTN4Q9NQC3 1192 aaKnown RBP20.31■□□□□ 0.84
SFXN3-202ENST00000393459 DEKP35659 375 aaKnown RBP20.29■□□□□ 0.84
SFXN3-202ENST00000393459 CARMIL1Q5VZK9 1371 aa20.29■□□□□ 0.84
SFXN3-202ENST00000393459 PPP1R15AO75807 674 aaPredicted RBP20.29■□□□□ 0.84
SFXN3-202ENST00000393459 POLR3GLQ9BT43 218 aa20.29■□□□□ 0.84
SFXN3-202ENST00000393459 URB2Q14146 1524 aaKnown RBP20.28■□□□□ 0.84
SFXN3-202ENST00000393459 RAD54L2Q9Y4B4 1467 aa20.27■□□□□ 0.84
SFXN3-202ENST00000393459 WDR97A6NE52 1622 aa20.26■□□□□ 0.83
SFXN3-202ENST00000393459 CCDC184Q52MB2 194 aa20.24■□□□□ 0.83
SFXN3-202ENST00000393459 ARAP1Q96P48 1450 aa20.23■□□□□ 0.83
SFXN3-202ENST00000393459 KIF21AQ7Z4S6 1674 aa20.2■□□□□ 0.82
SFXN3-202ENST00000393459 PAK3O75914 559 aaPredicted RBP20.18■□□□□ 0.82
SFXN3-202ENST00000393459 CCDC136Q96JN2 1154 aa20.18■□□□□ 0.82
SFXN3-202ENST00000393459 ANO8Q9HCE9 1232 aaPredicted RBP20.18■□□□□ 0.82
SFXN3-202ENST00000393459 NPM2Q86SE8 214 aaKnown RBP20.16■□□□□ 0.82
SFXN3-202ENST00000393459 CUL7Q14999 1698 aa20.14■□□□□ 0.82
SFXN3-202ENST00000393459 ARHGAP35Q9NRY4 1499 aa20.13■□□□□ 0.81
SFXN3-202ENST00000393459 ARID3CA6NKF2 412 aa20.12■□□□□ 0.81
SFXN3-202ENST00000393459 TONSLQ96HA7 1378 aa20.12■□□□□ 0.81
SFXN3-202ENST00000393459 CHIC2Q9UKJ5 165 aa20.11■□□□□ 0.81
SFXN3-202ENST00000393459 PRKCSHP14314 528 aaPredicted RBP20.11■□□□□ 0.81
SFXN3-202ENST00000393459 MAPKBP1O60336 1514 aa20.09■□□□□ 0.81
SFXN3-202ENST00000393459 MRC2Q9UBG0 1479 aa20.08■□□□□ 0.81
SFXN3-202ENST00000393459 ABCA5Q8WWZ7 1642 aa20.08■□□□□ 0.8
SFXN3-202ENST00000393459 SETD5Q9C0A6 1442 aa20.08■□□□□ 0.8
SFXN3-202ENST00000393459 GAPVD1Q14C86 1478 aa20.07■□□□□ 0.8
SFXN3-202ENST00000393459 TDRD9Q8NDG6 1382 aaKnown RBP20.06■□□□□ 0.8
SFXN3-202ENST00000393459 FOXD1Q16676 465 aa20.06■□□□□ 0.8
SFXN3-202ENST00000393459 CCER2I3L3R5 266 aa20.06■□□□□ 0.8
SFXN3-202ENST00000393459 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.06■□□□□ 0.8
SFXN3-202ENST00000393459 SALL2Q9Y467 1007 aaPredicted RBP20.06■□□□□ 0.8
SFXN3-202ENST00000393459 PHLDB1Q86UU1 1377 aa20.05■□□□□ 0.8
SFXN3-202ENST00000393459 MRS2Q9HD23 443 aa20.04■□□□□ 0.8
SFXN3-202ENST00000393459 RRBP1Q9P2E9 1410 aaKnown RBP20.04■□□□□ 0.8
SFXN3-202ENST00000393459 TARBP1Q13395 1621 aaKnown RBP20.02■□□□□ 0.8
SFXN3-202ENST00000393459 FANCIQ9NVI1 1328 aa20.02■□□□□ 0.79
SFXN3-202ENST00000393459 RRP7BPQ9NSQ0 103 aa20.01■□□□□ 0.79
SFXN3-202ENST00000393459 NOP58Q9Y2X3 529 aaKnown RBP19.99■□□□□ 0.79
SFXN3-202ENST00000393459 IL27Q8NEV9 243 aa19.99■□□□□ 0.79
SFXN3-202ENST00000393459 PPP4R2Q9NY27 417 aa19.98■□□□□ 0.79
SFXN3-202ENST00000393459 LAS1LQ9Y4W2 734 aaKnown RBP19.98■□□□□ 0.79
SFXN3-202ENST00000393459 ZNF326Q5BKZ1 582 aaKnown RBP19.97■□□□□ 0.79
SFXN3-202ENST00000393459 HSPA5P11021 654 aaKnown RBP19.97■□□□□ 0.79
SFXN3-202ENST00000393459 MAP3K1Q13233 1512 aa19.96■□□□□ 0.79
SFXN3-202ENST00000393459 FHAD1B1AJZ9 1412 aa19.96■□□□□ 0.79
SFXN3-202ENST00000393459 CTTNBP2Q8WZ74 1663 aa19.95■□□□□ 0.78
SFXN3-202ENST00000393459 RTL5Q5HYW3 569 aaPredicted RBP19.95■□□□□ 0.78
SFXN3-202ENST00000393459 EFCAB5A4FU69 1503 aa19.95■□□□□ 0.78
SFXN3-202ENST00000393459 WDR62O43379 1518 aa19.94■□□□□ 0.78
SFXN3-202ENST00000393459 WASHC2AQ641Q2 1341 aa19.91■□□□□ 0.78
SFXN3-202ENST00000393459 IFT140Q96RY7 1462 aa19.91■□□□□ 0.78
SFXN3-202ENST00000393459 C11orf95C9JLR9 678 aaPredicted RBP19.89■□□□□ 0.77
SFXN3-202ENST00000393459 ERCC6Q03468 1493 aa19.89■□□□□ 0.77
SFXN3-202ENST00000393459 PBRM1Q86U86 1689 aa19.87■□□□□ 0.77
SFXN3-202ENST00000393459 AQRO60306 1485 aaKnown RBP eCLIP19.86■□□□□ 0.77
SFXN3-202ENST00000393459 SKAP1Q86WV1 359 aa19.85■□□□□ 0.77
SFXN3-202ENST00000393459 GRIN2BQ13224 1484 aa19.85■□□□□ 0.77
SFXN3-202ENST00000393459 TIAM1Q13009 1591 aa19.85■□□□□ 0.77
SFXN3-202ENST00000393459 ANP32AP39687 249 aaKnown RBP19.84■□□□□ 0.77
SFXN3-202ENST00000393459 ZBTB47Q9UFB7 747 aaPredicted RBP19.84■□□□□ 0.77
SFXN3-202ENST00000393459 FHOD3Q2V2M9 1422 aa19.84■□□□□ 0.77
SFXN3-202ENST00000393459 CFAP43Q8NDM7 1665 aa19.81■□□□□ 0.76
SFXN3-202ENST00000393459 FMN1Q68DA7 1419 aa19.81■□□□□ 0.76
SFXN3-202ENST00000393459 AKNAQ7Z591 1439 aa19.81■□□□□ 0.76
SFXN3-202ENST00000393459 FYCO1Q9BQS8 1478 aa19.8■□□□□ 0.76
SFXN3-202ENST00000393459 PCF11O94913 1555 aaKnown RBP19.8■□□□□ 0.76
SFXN3-202ENST00000393459 ADAMTS12P58397 1594 aa19.8■□□□□ 0.76
SFXN3-202ENST00000393459 CASKIN1Q8WXD9 1431 aa19.79■□□□□ 0.76
SFXN3-202ENST00000393459 EIF4G2P78344 907 aaKnown RBP eCLIP19.78■□□□□ 0.76
SFXN3-202ENST00000393459 SAMD9Q5K651 1589 aa19.78■□□□□ 0.76
SFXN3-202ENST00000393459 LRRC9Q6ZRR7 1453 aa19.77■□□□□ 0.76
SFXN3-202ENST00000393459 THOC2Q8NI27 1593 aaKnown RBP19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms