RNA–Protein interactions for RNA: ENST00000393083.2

PTN-202, Transcript of pleiotrophin, humanhuman

TSL 5 BASIC

Gene PTN, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-202ENST00000393083 RIMBP3BA6NNM3 1639 aa22.23■■□□□ 1.15
PTN-202ENST00000393083 RIMBP3Q9UFD9 1639 aa22.23■■□□□ 1.15
PTN-202ENST00000393083 FAM9AQ8IZU1 332 aaPredicted RBP22.23■■□□□ 1.15
PTN-202ENST00000393083 KIAA0586Q9BVV6 1533 aa22.21■■□□□ 1.15
PTN-202ENST00000393083 SHROOM2Q13796 1616 aa22.19■■□□□ 1.14
PTN-202ENST00000393083 JPH4Q96JJ6 628 aa22.17■■□□□ 1.14
PTN-202ENST00000393083 ERCC6L2Q5T890 1561 aa22.12■■□□□ 1.13
PTN-202ENST00000393083 PRG4Q92954 1404 aaPredicted RBP22.11■■□□□ 1.13
PTN-202ENST00000393083 ARAP1Q96P48 1450 aa22.11■■□□□ 1.13
PTN-202ENST00000393083 IQGAP2Q13576 1575 aa22.08■■□□□ 1.13
PTN-202ENST00000393083 KIF21BO75037 1637 aa22.07■■□□□ 1.12
PTN-202ENST00000393083 CYB5RLQ6IPT4 315 aa22.05■■□□□ 1.12
PTN-202ENST00000393083 LOC105371045A0A1W2PR82 267 aa22.04■■□□□ 1.12
PTN-202ENST00000393083 CTTNBP2Q8WZ74 1663 aa22.02■■□□□ 1.12
PTN-202ENST00000393083 UGGT2Q9NYU1 1516 aa22■■□□□ 1.11
PTN-202ENST00000393083 DISP1Q96F81 1524 aa21.96■■□□□ 1.11
PTN-202ENST00000393083 GOLGA3Q08378 1498 aa21.95■■□□□ 1.1
PTN-202ENST00000393083 CARMIL2Q6F5E8 1435 aa21.94■■□□□ 1.1
PTN-202ENST00000393083 EHMT2Q96KQ7 1210 aa21.91■■□□□ 1.1
PTN-202ENST00000393083 TNIKQ9UKE5 1360 aa21.89■■□□□ 1.09
PTN-202ENST00000393083 KIAA0556O60303 1618 aa21.88■■□□□ 1.09
PTN-202ENST00000393083 UBTFP17480 764 aaKnown RBP21.88■■□□□ 1.09
PTN-202ENST00000393083 PTPRGP23470 1445 aa21.86■■□□□ 1.09
PTN-202ENST00000393083 SAMD9Q5K651 1589 aa21.8■■□□□ 1.08
PTN-202ENST00000393083 TTBK1Q5TCY1 1321 aaPredicted RBP21.79■■□□□ 1.08
PTN-202ENST00000393083 RANGAP1P46060 587 aaPredicted RBP21.77■■□□□ 1.08
PTN-202ENST00000393083 P3H3Q8IVL6 736 aa21.76■■□□□ 1.07
PTN-202ENST00000393083 ADCY10Q96PN6 1610 aa21.74■■□□□ 1.07
PTN-202ENST00000393083 EFCAB5A4FU69 1503 aa21.72■■□□□ 1.07
PTN-202ENST00000393083 UACAQ9BZF9 1416 aa21.71■■□□□ 1.07
PTN-202ENST00000393083 UHRF1BP1LA0JNW5 1464 aa21.7■■□□□ 1.06
PTN-202ENST00000393083 FHOD3Q2V2M9 1422 aa21.68■■□□□ 1.06
PTN-202ENST00000393083 PLB1Q6P1J6 1458 aa21.67■■□□□ 1.06
PTN-202ENST00000393083 ABCC2Q92887 1545 aa21.66■■□□□ 1.06
PTN-202ENST00000393083 ARHGAP35Q9NRY4 1499 aa21.66■■□□□ 1.06
PTN-202ENST00000393083 SENP3Q9H4L4 574 aaPredicted RBP21.65■■□□□ 1.06
PTN-202ENST00000393083 ABCA8O94911 1581 aa21.65■■□□□ 1.06
PTN-202ENST00000393083 NPM1P06748 294 aaKnown RBP eCLIP21.62■■□□□ 1.05
PTN-202ENST00000393083 CEP162Q5TB80 1403 aa21.62■■□□□ 1.05
PTN-202ENST00000393083 KDM5BQ9UGL1 1544 aa21.6■■□□□ 1.05
PTN-202ENST00000393083 MAPKBP1O60336 1514 aa21.57■■□□□ 1.04
PTN-202ENST00000393083 CLIP1P30622 1438 aa21.57■■□□□ 1.04
PTN-202ENST00000393083 RAPGEF6Q8TEU7 1601 aa21.54■■□□□ 1.04
PTN-202ENST00000393083 FMN1Q68DA7 1419 aa21.52■■□□□ 1.04
PTN-202ENST00000393083 TRHP20396 242 aaPredicted RBP21.52■■□□□ 1.04
PTN-202ENST00000393083 ZCCHC11Q5TAX3 1644 aaKnown RBP21.51■■□□□ 1.03
PTN-202ENST00000393083 NUP153P49790 1475 aaKnown RBP21.5■■□□□ 1.03
PTN-202ENST00000393083 ASXL2Q76L83 1435 aa21.49■■□□□ 1.03
PTN-202ENST00000393083 ATP10BO94823 1461 aa21.49■■□□□ 1.03
PTN-202ENST00000393083 ABCC10Q5T3U5 1492 aa21.46■■□□□ 1.03
PTN-202ENST00000393083 ARID3CA6NKF2 412 aa21.46■■□□□ 1.03
PTN-202ENST00000393083 DIP2BQ9P265 1576 aa21.41■■□□□ 1.02
PTN-202ENST00000393083 FAM69CQ0P6D2 419 aa21.4■■□□□ 1.02
PTN-202ENST00000393083 WDR7Q9Y4E6 1490 aa21.4■■□□□ 1.02
PTN-202ENST00000393083 KIF13AQ9H1H9 1805 aa21.4■■□□□ 1.02
PTN-202ENST00000393083 CASKIN1Q8WXD9 1431 aa21.39■■□□□ 1.01
PTN-202ENST00000393083 HECW1Q76N89 1606 aa21.38■■□□□ 1.01
PTN-202ENST00000393083 EPRSP07814 1512 aaKnown RBP21.37■■□□□ 1.01
PTN-202ENST00000393083 PCF11O94913 1555 aaKnown RBP21.36■■□□□ 1.01
PTN-202ENST00000393083 ATP1B4Q9UN42 357 aaPredicted RBP21.36■■□□□ 1.01
PTN-202ENST00000393083 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.35■■□□□ 1.01
PTN-202ENST00000393083 HNRNPUL2Q1KMD3 747 aaKnown RBP21.35■■□□□ 1.01
PTN-202ENST00000393083 CDK13Q14004 1512 aaKnown RBP21.35■■□□□ 1.01
PTN-202ENST00000393083 GLI2P10070 1586 aa21.34■■□□□ 1.01
PTN-202ENST00000393083 FYCO1Q9BQS8 1478 aa21.33■■□□□ 1
PTN-202ENST00000393083 KCNH8Q96L42 1107 aa21.3■■□□□ 1
PTN-202ENST00000393083 LRRIQ1Q96JM4 1722 aa21.3■■□□□ 1
PTN-202ENST00000393083 PLEKHD1A6NEE1 506 aa21.29■■□□□ 1
PTN-202ENST00000393083 PHF23Q9BUL5 403 aaPredicted RBP21.28■■□□□ 1
PTN-202ENST00000393083 VPS8Q8N3P4 1428 aa21.27■■□□□ 1
PTN-202ENST00000393083 CCDC18Q5T9S5 1454 aa21.26■□□□□ 0.99
PTN-202ENST00000393083 MAP3K4Q9Y6R4 1608 aa21.23■□□□□ 0.99
PTN-202ENST00000393083 CDK11AQ9UQ88 783 aaPredicted RBP21.23■□□□□ 0.99
PTN-202ENST00000393083 ABCA9Q8IUA7 1624 aa21.19■□□□□ 0.98
PTN-202ENST00000393083 TROQ12816 1431 aaPredicted RBP21.19■□□□□ 0.98
PTN-202ENST00000393083 CD109Q6YHK3 1445 aa21.19■□□□□ 0.98
PTN-202ENST00000393083 PPRC1Q5VV67 1664 aaKnown RBP21.19■□□□□ 0.98
PTN-202ENST00000393083 CFAP43Q8NDM7 1665 aa21.18■□□□□ 0.98
PTN-202ENST00000393083 TSPOAP1O95153 1857 aa21.18■□□□□ 0.98
PTN-202ENST00000393083 MAGI3Q5TCQ9 1506 aa21.17■□□□□ 0.98
PTN-202ENST00000393083 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.14■□□□□ 0.98
PTN-202ENST00000393083 TEX14Q8IWB6 1497 aa21.11■□□□□ 0.97
PTN-202ENST00000393083 KIF14Q15058 1648 aa21.11■□□□□ 0.97
PTN-202ENST00000393083 TTC37Q6PGP7 1564 aa21.1■□□□□ 0.97
PTN-202ENST00000393083 TIAM1Q13009 1591 aa21.06■□□□□ 0.96
PTN-202ENST00000393083 MAP3K1Q13233 1512 aa21.06■□□□□ 0.96
PTN-202ENST00000393083 MTUS2Q5JR59 1369 aa21.06■□□□□ 0.96
PTN-202ENST00000393083 PPARGC1BQ86YN6 1023 aaKnown RBP21.05■□□□□ 0.96
PTN-202ENST00000393083 PLCH2O75038 1416 aa21.03■□□□□ 0.96
PTN-202ENST00000393083 EHBP1L1Q8N3D4 1523 aa21.02■□□□□ 0.96
PTN-202ENST00000393083 COL17A1Q9UMD9 1497 aaPredicted RBP21.02■□□□□ 0.96
PTN-202ENST00000393083 APLP2Q06481 763 aa21.01■□□□□ 0.95
PTN-202ENST00000393083 NEO1Q92859 1461 aa21.01■□□□□ 0.95
PTN-202ENST00000393083 KDM6BO15054 1643 aa21■□□□□ 0.95
PTN-202ENST00000393083 PHLDB1Q86UU1 1377 aa21■□□□□ 0.95
PTN-202ENST00000393083 LRRC9Q6ZRR7 1453 aa20.99■□□□□ 0.95
PTN-202ENST00000393083 KANK4Q5T7N3 995 aaPredicted RBP20.99■□□□□ 0.95
PTN-202ENST00000393083 ARAP3Q8WWN8 1544 aa20.99■□□□□ 0.95
PTN-202ENST00000393083 FANCAO15360 1455 aa20.99■□□□□ 0.95
PTN-202ENST00000393083 TRIM26Q12899 539 aaPredicted RBP20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms