RNA–Protein interactions for RNA: ENST00000392645.6

ATXN2-204, Transcript of ataxin 2, humanhuman

TSL 2

Gene ATXN2, Length 2,842 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN2-204ENST00000392645 SCAF1Q9H7N4 1312 aaKnown RBP21.26■□□□□ 0.99
ATXN2-204ENST00000392645 AQRO60306 1485 aaKnown RBP eCLIP21.26■□□□□ 0.995e-7■■■■■ 30.6
ATXN2-204ENST00000392645 ABCA10Q8WWZ4 1543 aa21.25■□□□□ 0.99
ATXN2-204ENST00000392645 NEUROD1Q13562 356 aa21.24■□□□□ 0.99
ATXN2-204ENST00000392645 DHX57Q6P158 1386 aaKnown RBP21.23■□□□□ 0.99
ATXN2-204ENST00000392645 PDS5BQ9NTI5 1447 aa21.22■□□□□ 0.99
ATXN2-204ENST00000392645 MIER1Q8N108 512 aa21.21■□□□□ 0.99
ATXN2-204ENST00000392645 FBLN2P98095 1184 aa21.2■□□□□ 0.98
ATXN2-204ENST00000392645 GAPVD1Q14C86 1478 aa21.2■□□□□ 0.98
ATXN2-204ENST00000392645 PCF11O94913 1555 aaKnown RBP21.19■□□□□ 0.98
ATXN2-204ENST00000392645 SIN3AQ96ST3 1273 aa21.18■□□□□ 0.98
ATXN2-204ENST00000392645 LAMC3Q9Y6N6 1575 aa21.17■□□□□ 0.98
ATXN2-204ENST00000392645 TIAM1Q13009 1591 aa21.15■□□□□ 0.98
ATXN2-204ENST00000392645 RAB3GAP2Q9H2M9 1393 aa21.14■□□□□ 0.97
ATXN2-204ENST00000392645 LRRC9Q6ZRR7 1453 aa21.14■□□□□ 0.97
ATXN2-204ENST00000392645 HIRIP3Q9BW71 556 aaPredicted RBP21.14■□□□□ 0.97
ATXN2-204ENST00000392645 RRBP1Q9P2E9 1410 aaKnown RBP21.13■□□□□ 0.97
ATXN2-204ENST00000392645 CHIC2Q9UKJ5 165 aa21.1■□□□□ 0.97
ATXN2-204ENST00000392645 ZNF608Q9ULD9 1512 aaPredicted RBP21.08■□□□□ 0.97
ATXN2-204ENST00000392645 MTUS2Q5JR59 1369 aa21.06■□□□□ 0.96
ATXN2-204ENST00000392645 FHAD1B1AJZ9 1412 aa21.06■□□□□ 0.96
ATXN2-204ENST00000392645 ACIN1Q9UKV3 1341 aaKnown RBP21■□□□□ 0.95
ATXN2-204ENST00000392645 RRP7BPQ9NSQ0 103 aa20.99■□□□□ 0.95
ATXN2-204ENST00000392645 ABCA5Q8WWZ7 1642 aa20.98■□□□□ 0.95
ATXN2-204ENST00000392645 GTF3C3Q9Y5Q9 886 aa20.97■□□□□ 0.95
ATXN2-204ENST00000392645 WDR97A6NE52 1622 aa20.97■□□□□ 0.95
ATXN2-204ENST00000392645 CTTNBP2Q8WZ74 1663 aa20.97■□□□□ 0.95
ATXN2-204ENST00000392645 ERCC6Q03468 1493 aa20.97■□□□□ 0.95
ATXN2-204ENST00000392645 CUL7Q14999 1698 aa20.96■□□□□ 0.95
ATXN2-204ENST00000392645 CASKIN1Q8WXD9 1431 aa20.94■□□□□ 0.94
ATXN2-204ENST00000392645 TARBP1Q13395 1621 aaKnown RBP20.94■□□□□ 0.94
ATXN2-204ENST00000392645 SETD5Q9C0A6 1442 aa20.93■□□□□ 0.94
ATXN2-204ENST00000392645 FMN1Q68DA7 1419 aa20.91■□□□□ 0.94
ATXN2-204ENST00000392645 MRC2Q9UBG0 1479 aa20.9■□□□□ 0.94
ATXN2-204ENST00000392645 FYCO1Q9BQS8 1478 aa20.9■□□□□ 0.94
ATXN2-204ENST00000392645 SNAPC4Q5SXM2 1469 aa20.89■□□□□ 0.93
ATXN2-204ENST00000392645 PTPRKQ15262 1439 aa20.88■□□□□ 0.93
ATXN2-204ENST00000392645 CHMP7Q8WUX9 453 aaPredicted RBP20.87■□□□□ 0.93
ATXN2-204ENST00000392645 CDK13Q14004 1512 aaKnown RBP20.87■□□□□ 0.93
ATXN2-204ENST00000392645 LRRIQ1Q96JM4 1722 aa20.87■□□□□ 0.93
ATXN2-204ENST00000392645 CENPBP07199 599 aaPredicted RBP20.86■□□□□ 0.93
ATXN2-204ENST00000392645 FOXD1Q16676 465 aa20.86■□□□□ 0.93
ATXN2-204ENST00000392645 KCNH8Q96L42 1107 aa20.86■□□□□ 0.93
ATXN2-204ENST00000392645 CFAP43Q8NDM7 1665 aa20.85■□□□□ 0.93
ATXN2-204ENST00000392645 EFCAB5A4FU69 1503 aa20.84■□□□□ 0.93
ATXN2-204ENST00000392645 MAPKBP1O60336 1514 aa20.84■□□□□ 0.93
ATXN2-204ENST00000392645 FGD6Q6ZV73 1430 aa20.84■□□□□ 0.93
ATXN2-204ENST00000392645 TRIM52Q96A61 297 aa20.83■□□□□ 0.93
ATXN2-204ENST00000392645 ZNF644Q9H582 1327 aaPredicted RBP20.82■□□□□ 0.92
ATXN2-204ENST00000392645 NCOA2Q15596 1464 aa20.82■□□□□ 0.92
ATXN2-204ENST00000392645 PBRM1Q86U86 1689 aa20.82■□□□□ 0.92
ATXN2-204ENST00000392645 MAGI3Q5TCQ9 1506 aa20.81■□□□□ 0.92
ATXN2-204ENST00000392645 ZNF777Q9ULD5 760 aaPredicted RBP20.81■□□□□ 0.92
ATXN2-204ENST00000392645 DDX10Q13206 875 aaKnown RBP20.79■□□□□ 0.92
ATXN2-204ENST00000392645 GRIN2BQ13224 1484 aa20.78■□□□□ 0.92
ATXN2-204ENST00000392645 MAP3K1Q13233 1512 aa20.78■□□□□ 0.92
ATXN2-204ENST00000392645 SAMD9Q5K651 1589 aa20.75■□□□□ 0.91
ATXN2-204ENST00000392645 CLSPNQ9HAW4 1339 aa20.75■□□□□ 0.91
ATXN2-204ENST00000392645 IQGAP2Q13576 1575 aa20.74■□□□□ 0.91
ATXN2-204ENST00000392645 ADAMTS12P58397 1594 aa20.73■□□□□ 0.91
ATXN2-204ENST00000392645 MYOM3Q5VTT5 1437 aa20.7■□□□□ 0.9
ATXN2-204ENST00000392645 CCDC18Q5T9S5 1454 aa20.68■□□□□ 0.9
ATXN2-204ENST00000392645 THOC2Q8NI27 1593 aaKnown RBP20.68■□□□□ 0.9
ATXN2-204ENST00000392645 IFT140Q96RY7 1462 aa20.67■□□□□ 0.9
ATXN2-204ENST00000392645 EPRSP07814 1512 aaKnown RBP20.67■□□□□ 0.9
ATXN2-204ENST00000392645 EIF4G3O43432 1585 aaKnown RBP20.67■□□□□ 0.9
ATXN2-204ENST00000392645 CNGB1Q14028 1251 aaPredicted RBP20.64■□□□□ 0.89
ATXN2-204ENST00000392645 PLB1Q6P1J6 1458 aa20.63■□□□□ 0.89
ATXN2-204ENST00000392645 JPH4Q96JJ6 628 aa20.62■□□□□ 0.89
ATXN2-204ENST00000392645 TONSLQ96HA7 1378 aa20.62■□□□□ 0.89
ATXN2-204ENST00000392645 WDR62O43379 1518 aa20.61■□□□□ 0.89
ATXN2-204ENST00000392645 NAIPQ13075 1403 aa20.61■□□□□ 0.89
ATXN2-204ENST00000392645 GRIN2AQ12879 1464 aa20.61■□□□□ 0.89
ATXN2-204ENST00000392645 PRG4Q92954 1404 aaPredicted RBP20.61■□□□□ 0.89
ATXN2-204ENST00000392645 SUPT6HQ7KZ85 1726 aaKnown RBP20.6■□□□□ 0.89
ATXN2-204ENST00000392645 DISP1Q96F81 1524 aa20.6■□□□□ 0.89
ATXN2-204ENST00000392645 PPP1R15AO75807 674 aaPredicted RBP20.59■□□□□ 0.89
ATXN2-204ENST00000392645 PTPN23Q9H3S7 1636 aa20.59■□□□□ 0.89
ATXN2-204ENST00000392645 KDM6BO15054 1643 aa20.57■□□□□ 0.88
ATXN2-204ENST00000392645 EHBP1L1Q8N3D4 1523 aa20.56■□□□□ 0.88
ATXN2-204ENST00000392645 UGGT2Q9NYU1 1516 aa20.55■□□□□ 0.88
ATXN2-204ENST00000392645 HECW1Q76N89 1606 aa20.54■□□□□ 0.88
ATXN2-204ENST00000392645 KIAA0586Q9BVV6 1533 aa20.53■□□□□ 0.88
ATXN2-204ENST00000392645 HFM1A2PYH4 1435 aa20.53■□□□□ 0.88
ATXN2-204ENST00000392645 CFDP1Q9UEE9 299 aaPredicted RBP20.53■□□□□ 0.88
ATXN2-204ENST00000392645 NUP153P49790 1475 aaKnown RBP20.53■□□□□ 0.88
ATXN2-204ENST00000392645 ZNF326Q5BKZ1 582 aaKnown RBP20.52■□□□□ 0.88
ATXN2-204ENST00000392645 CEP170Q5SW79 1584 aa20.52■□□□□ 0.87
ATXN2-204ENST00000392645 KIAA0556O60303 1618 aa20.5■□□□□ 0.87
ATXN2-204ENST00000392645 MPHOSPH9Q99550 1183 aa20.49■□□□□ 0.87
ATXN2-204ENST00000392645 UACAQ9BZF9 1416 aa20.47■□□□□ 0.87
ATXN2-204ENST00000392645 CDK11AQ9UQ88 783 aaPredicted RBP20.46■□□□□ 0.87
ATXN2-204ENST00000392645 SLC4A1APQ9BWU0 796 aaKnown RBP20.45■□□□□ 0.86
ATXN2-204ENST00000392645 POLR3GLQ9BT43 218 aa20.44■□□□□ 0.86
ATXN2-204ENST00000392645 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.44■□□□□ 0.867e-7■■■□□ 17.2
ATXN2-204ENST00000392645 SYNJ2O15056 1496 aa20.44■□□□□ 0.86
ATXN2-204ENST00000392645 L3MBTL2Q969R5 705 aa20.42■□□□□ 0.86
ATXN2-204ENST00000392645 HNRNPMP52272 730 aaKnown RBP eCLIP20.41■□□□□ 0.862e-6■■■■□ 21
ATXN2-204ENST00000392645 ARHGEF11O15085 1522 aa20.4■□□□□ 0.86
ATXN2-204ENST00000392645 RAPGEF6Q8TEU7 1601 aa20.39■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms