RNA–Protein interactions for RNA: ENST00000391828.7

NLRP3-206, Transcript of NLR family pyrin domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NLRP3, Length 3,853 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRP3-206ENST00000391828 KCNH8Q96L42 1107 aa11.63□□□□□ -0.55
NLRP3-206ENST00000391828 ATAD2BQ9ULI0 1458 aa11.61□□□□□ -0.55
NLRP3-206ENST00000391828 CARMIL1Q5VZK9 1371 aa11.61□□□□□ -0.55
NLRP3-206ENST00000391828 DHX57Q6P158 1386 aaKnown RBP11.61□□□□□ -0.55
NLRP3-206ENST00000391828 CUX2O14529 1486 aa11.61□□□□□ -0.55
NLRP3-206ENST00000391828 RAB3GAP2Q9H2M9 1393 aa11.6□□□□□ -0.55
NLRP3-206ENST00000391828 SENP3-EIF4A1A0A087X0R7 540 aa11.59□□□□□ -0.55
NLRP3-206ENST00000391828 MYT1LQ9UL68 1186 aa11.58□□□□□ -0.56
NLRP3-206ENST00000391828 MRS2Q9HD23 443 aa11.56□□□□□ -0.56
NLRP3-206ENST00000391828 RBM19Q9Y4C8 960 aaKnown RBP11.54□□□□□ -0.56
NLRP3-206ENST00000391828 SETD5Q9C0A6 1442 aa11.54□□□□□ -0.56
NLRP3-206ENST00000391828 EIF4G1Q04637 1599 aaKnown RBP11.54□□□□□ -0.56
NLRP3-206ENST00000391828 EIF4G2P78344 907 aaKnown RBP eCLIP11.54□□□□□ -0.56
NLRP3-206ENST00000391828 SALL2Q9Y467 1007 aaPredicted RBP11.53□□□□□ -0.56
NLRP3-206ENST00000391828 SLC4A1APQ9BWU0 796 aaKnown RBP11.5□□□□□ -0.57
NLRP3-206ENST00000391828 PPP1R15AO75807 674 aaPredicted RBP11.49□□□□□ -0.57
NLRP3-206ENST00000391828 KDM2AQ9Y2K7 1162 aa11.49□□□□□ -0.57
NLRP3-206ENST00000391828 FHAD1B1AJZ9 1412 aa11.48□□□□□ -0.57
NLRP3-206ENST00000391828 KIF21BO75037 1637 aa11.48□□□□□ -0.57
NLRP3-206ENST00000391828 FOXD1Q16676 465 aa11.47□□□□□ -0.57
NLRP3-206ENST00000391828 PRKCSHP14314 528 aaPredicted RBP11.47□□□□□ -0.57
NLRP3-206ENST00000391828 SYNJ1O43426 1573 aa11.47□□□□□ -0.57
NLRP3-206ENST00000391828 BICRAQ9NZM4 1560 aa11.47□□□□□ -0.57
NLRP3-206ENST00000391828 DAXXQ9UER7 740 aaPredicted RBP11.46□□□□□ -0.57
NLRP3-206ENST00000391828 UNC13AQ9UPW8 1703 aa11.45□□□□□ -0.58
NLRP3-206ENST00000391828 RTL5Q5HYW3 569 aaPredicted RBP11.45□□□□□ -0.58
NLRP3-206ENST00000391828 TIMELESSQ9UNS1 1208 aa11.45□□□□□ -0.58
NLRP3-206ENST00000391828 TMC1Q8TDI8 760 aa11.44□□□□□ -0.58
NLRP3-206ENST00000391828 FHOD3Q2V2M9 1422 aa11.44□□□□□ -0.58
NLRP3-206ENST00000391828 TDRD9Q8NDG6 1382 aaKnown RBP11.44□□□□□ -0.58
NLRP3-206ENST00000391828 CCER2I3L3R5 266 aa11.43□□□□□ -0.58
NLRP3-206ENST00000391828 NPM2Q86SE8 214 aaKnown RBP11.43□□□□□ -0.58
NLRP3-206ENST00000391828 IGF1RP08069 1367 aa11.43□□□□□ -0.58
NLRP3-206ENST00000391828 ARAP1Q96P48 1450 aa11.42□□□□□ -0.58
NLRP3-206ENST00000391828 HSPA5P11021 654 aaKnown RBP11.42□□□□□ -0.58
NLRP3-206ENST00000391828 CCDC136Q96JN2 1154 aa11.41□□□□□ -0.58
NLRP3-206ENST00000391828 ARHGAP35Q9NRY4 1499 aa11.41□□□□□ -0.58
NLRP3-206ENST00000391828 CADPSQ9ULU8 1353 aa11.4□□□□□ -0.58
NLRP3-206ENST00000391828 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.4□□□□□ -0.58
NLRP3-206ENST00000391828 B4GALNT3Q6L9W6 998 aa11.38□□□□□ -0.59
NLRP3-206ENST00000391828 CHMP7Q8WUX9 453 aaPredicted RBP11.38□□□□□ -0.59
NLRP3-206ENST00000391828 NBR1Q14596 966 aa11.37□□□□□ -0.59
NLRP3-206ENST00000391828 PHLDB1Q86UU1 1377 aa11.37□□□□□ -0.59
NLRP3-206ENST00000391828 TSPY4P0CV99 314 aa11.37□□□□□ -0.59
NLRP3-206ENST00000391828 TSPY10P0CW01 314 aa11.37□□□□□ -0.59
NLRP3-206ENST00000391828 CFDP1Q9UEE9 299 aaPredicted RBP11.37□□□□□ -0.59
NLRP3-206ENST00000391828 ANP32AP39687 249 aaKnown RBP11.37□□□□□ -0.59
NLRP3-206ENST00000391828 FANCIQ9NVI1 1328 aa11.36□□□□□ -0.59
NLRP3-206ENST00000391828 RGL3Q3MIN7 710 aa11.36□□□□□ -0.59
NLRP3-206ENST00000391828 CC2D2AQ9P2K1 1620 aa11.35□□□□□ -0.59
NLRP3-206ENST00000391828 PRXQ9BXM0 1461 aa11.34□□□□□ -0.59
NLRP3-206ENST00000391828 L3MBTL2Q969R5 705 aa11.34□□□□□ -0.59
NLRP3-206ENST00000391828 MPHOSPH9Q99550 1183 aa11.34□□□□□ -0.59
NLRP3-206ENST00000391828 RRBP1Q9P2E9 1410 aaKnown RBP11.34□□□□□ -0.59
NLRP3-206ENST00000391828 PPP4R2Q9NY27 417 aa11.32□□□□□ -0.6
NLRP3-206ENST00000391828 CARD11Q9BXL7 1154 aa11.31□□□□□ -0.6
NLRP3-206ENST00000391828 FMN1Q68DA7 1419 aa11.3□□□□□ -0.6
NLRP3-206ENST00000391828 ERICH6BQ5W0A0 696 aa11.3□□□□□ -0.6
NLRP3-206ENST00000391828 PLEKHD1A6NEE1 506 aa11.3□□□□□ -0.6
NLRP3-206ENST00000391828 NCAPD3P42695 1498 aa11.28□□□□□ -0.6
NLRP3-206ENST00000391828 FGD5Q6ZNL6 1462 aa11.28□□□□□ -0.6
NLRP3-206ENST00000391828 RAD54L2Q9Y4B4 1467 aa11.28□□□□□ -0.6
NLRP3-206ENST00000391828 DEKP35659 375 aaKnown RBP11.27□□□□□ -0.6
NLRP3-206ENST00000391828 ZBTB47Q9UFB7 747 aaPredicted RBP11.27□□□□□ -0.61
NLRP3-206ENST00000391828 MSH5O43196 834 aa11.27□□□□□ -0.61
NLRP3-206ENST00000391828 LRRC9Q6ZRR7 1453 aa11.27□□□□□ -0.61
NLRP3-206ENST00000391828 PKD2Q13563 968 aa11.26□□□□□ -0.61
NLRP3-206ENST00000391828 CUX1P39880 1505 aa11.25□□□□□ -0.61
NLRP3-206ENST00000391828 FANCD2Q9BXW9 1451 aa11.25□□□□□ -0.61
NLRP3-206ENST00000391828 DCAF11Q8TEB1 546 aa11.25□□□□□ -0.61
NLRP3-206ENST00000391828 ERICH3Q5RHP9 1530 aa11.25□□□□□ -0.61
NLRP3-206ENST00000391828 TOP2BQ02880 1626 aa11.25□□□□□ -0.61
NLRP3-206ENST00000391828 CFTRP13569 1480 aa11.23□□□□□ -0.61
NLRP3-206ENST00000391828 CANXP27824 592 aaKnown RBP11.23□□□□□ -0.61
NLRP3-206ENST00000391828 ERCC6Q03468 1493 aa11.23□□□□□ -0.61
NLRP3-206ENST00000391828 CCDC18Q5T9S5 1454 aa11.22□□□□□ -0.61
NLRP3-206ENST00000391828 CHGAP10645 457 aaKnown RBP11.22□□□□□ -0.61
NLRP3-206ENST00000391828 NOP58Q9Y2X3 529 aaKnown RBP11.22□□□□□ -0.61
NLRP3-206ENST00000391828 PRKRIP1Q9H875 184 aaPredicted RBP11.21□□□□□ -0.62
NLRP3-206ENST00000391828 FGD6Q6ZV73 1430 aa11.2□□□□□ -0.62
NLRP3-206ENST00000391828 CC2D1BQ5T0F9 858 aaKnown RBP11.2□□□□□ -0.62
NLRP3-206ENST00000391828 WDR97A6NE52 1622 aa11.2□□□□□ -0.62
NLRP3-206ENST00000391828 ZNF644Q9H582 1327 aaPredicted RBP11.19□□□□□ -0.62
NLRP3-206ENST00000391828 WDR43Q15061 677 aaKnown RBP eCLIP11.18□□□□□ -0.62
NLRP3-206ENST00000391828 WASHC2AQ641Q2 1341 aa11.18□□□□□ -0.62
NLRP3-206ENST00000391828 SENP3Q9H4L4 574 aaPredicted RBP11.16□□□□□ -0.62
NLRP3-206ENST00000391828 MAPKBP1O60336 1514 aa11.16□□□□□ -0.62
NLRP3-206ENST00000391828 PDS5BQ9NTI5 1447 aa11.16□□□□□ -0.62
NLRP3-206ENST00000391828 CCDC184Q52MB2 194 aa11.15□□□□□ -0.62
NLRP3-206ENST00000391828 UACAQ9BZF9 1416 aa11.15□□□□□ -0.63
NLRP3-206ENST00000391828 NUP155O75694 1391 aa11.15□□□□□ -0.63
NLRP3-206ENST00000391828 CASKIN1Q8WXD9 1431 aa11.13□□□□□ -0.63
NLRP3-206ENST00000391828 MYOM3Q5VTT5 1437 aa11.13□□□□□ -0.63
NLRP3-206ENST00000391828 HNRNPMP52272 730 aaKnown RBP eCLIP11.12□□□□□ -0.63
NLRP3-206ENST00000391828 ANO8Q9HCE9 1232 aaPredicted RBP11.12□□□□□ -0.63
NLRP3-206ENST00000391828 LAS1LQ9Y4W2 734 aaKnown RBP11.12□□□□□ -0.63
NLRP3-206ENST00000391828 TIAM1Q13009 1591 aa11.12□□□□□ -0.63
NLRP3-206ENST00000391828 ST20-MTHFSA0A0A6YYL1 179 aa11.11□□□□□ -0.63
NLRP3-206ENST00000391828 NESP48681 1621 aa11.11□□□□□ -0.63
NLRP3-206ENST00000391828 KNSTRNQ9Y448 316 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms