RNA–Protein interactions for RNA: ENST00000389609.8

CCDC149-202, Transcript of coiled-coil domain containing 149, humanhuman

APPRIS P3 TSL 2 BASIC

Gene CCDC149, Length 2,127 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149-202ENST00000389609 FGD5Q6ZNL6 1462 aa16.52■□□□□ 0.24
CCDC149-202ENST00000389609 LRRC9Q6ZRR7 1453 aa16.52■□□□□ 0.23
CCDC149-202ENST00000389609 AQRO60306 1485 aaKnown RBP eCLIP16.51■□□□□ 0.23
CCDC149-202ENST00000389609 TIMELESSQ9UNS1 1208 aa16.5■□□□□ 0.23
CCDC149-202ENST00000389609 SETD5Q9C0A6 1442 aa16.46■□□□□ 0.23
CCDC149-202ENST00000389609 CUL7Q14999 1698 aa16.46■□□□□ 0.23
CCDC149-202ENST00000389609 MAPKBP1O60336 1514 aa16.46■□□□□ 0.23
CCDC149-202ENST00000389609 FYCO1Q9BQS8 1478 aa16.46■□□□□ 0.23
CCDC149-202ENST00000389609 ANP32EQ9BTT0 268 aa16.46■□□□□ 0.23
CCDC149-202ENST00000389609 DNMBPQ6XZF7 1577 aa16.46■□□□□ 0.22
CCDC149-202ENST00000389609 ABCA10Q8WWZ4 1543 aa16.45■□□□□ 0.22
CCDC149-202ENST00000389609 FANCD2Q9BXW9 1451 aa16.45■□□□□ 0.22
CCDC149-202ENST00000389609 RAB3GAP2Q9H2M9 1393 aa16.45■□□□□ 0.22
CCDC149-202ENST00000389609 PCF11O94913 1555 aaKnown RBP16.4■□□□□ 0.22
CCDC149-202ENST00000389609 CASKIN1Q8WXD9 1431 aa16.4■□□□□ 0.22
CCDC149-202ENST00000389609 NESP48681 1621 aa16.39■□□□□ 0.21
CCDC149-202ENST00000389609 RAD54L2Q9Y4B4 1467 aa16.38■□□□□ 0.21
CCDC149-202ENST00000389609 PHLDB1Q86UU1 1377 aa16.36■□□□□ 0.21
CCDC149-202ENST00000389609 CTTNBP2Q8WZ74 1663 aa16.36■□□□□ 0.21
CCDC149-202ENST00000389609 TOPBP1Q92547 1522 aa16.35■□□□□ 0.21
CCDC149-202ENST00000389609 THOC2Q8NI27 1593 aaKnown RBP16.35■□□□□ 0.21
CCDC149-202ENST00000389609 POLA1P09884 1462 aaPredicted RBP16.35■□□□□ 0.21
CCDC149-202ENST00000389609 FMN1Q68DA7 1419 aa16.34■□□□□ 0.21
CCDC149-202ENST00000389609 ITGAEP38570 1179 aa16.32■□□□□ 0.2
CCDC149-202ENST00000389609 TSHZ2Q9NRE2 1034 aa16.31■□□□□ 0.2
CCDC149-202ENST00000389609 SUPT16HQ9Y5B9 1047 aaKnown RBP16.31■□□□□ 0.2
CCDC149-202ENST00000389609 WDR97A6NE52 1622 aa16.31■□□□□ 0.2
CCDC149-202ENST00000389609 KIF21AQ7Z4S6 1674 aa16.28■□□□□ 0.2
CCDC149-202ENST00000389609 P3H3Q8IVL6 736 aa16.28■□□□□ 0.2
CCDC149-202ENST00000389609 LAMC3Q9Y6N6 1575 aa16.28■□□□□ 0.2
CCDC149-202ENST00000389609 SAMD9Q5K651 1589 aa16.27■□□□□ 0.2
CCDC149-202ENST00000389609 DNAJC5BQ9UF47 199 aa16.26■□□□□ 0.19
CCDC149-202ENST00000389609 SNAPC4Q5SXM2 1469 aa16.26■□□□□ 0.19
CCDC149-202ENST00000389609 URB2Q14146 1524 aaKnown RBP16.25■□□□□ 0.19
CCDC149-202ENST00000389609 FGD6Q6ZV73 1430 aa16.24■□□□□ 0.19
CCDC149-202ENST00000389609 ABCA5Q8WWZ7 1642 aa16.23■□□□□ 0.19
CCDC149-202ENST00000389609 FHOD3Q2V2M9 1422 aa16.23■□□□□ 0.19
CCDC149-202ENST00000389609 HFM1A2PYH4 1435 aa16.22■□□□□ 0.19
CCDC149-202ENST00000389609 CCER2I3L3R5 266 aa16.2■□□□□ 0.18
CCDC149-202ENST00000389609 UACAQ9BZF9 1416 aa16.2■□□□□ 0.18
CCDC149-202ENST00000389609 EHBP1L1Q8N3D4 1523 aa16.19■□□□□ 0.18
CCDC149-202ENST00000389609 GRIN2BQ13224 1484 aa16.17■□□□□ 0.18
CCDC149-202ENST00000389609 PPP1R15AO75807 674 aaPredicted RBP16.17■□□□□ 0.18
CCDC149-202ENST00000389609 FAM50AQ14320 339 aaKnown RBP16.17■□□□□ 0.18
CCDC149-202ENST00000389609 AKNAQ7Z591 1439 aa16.17■□□□□ 0.18
CCDC149-202ENST00000389609 TDRD9Q8NDG6 1382 aaKnown RBP16.17■□□□□ 0.18
CCDC149-202ENST00000389609 ARHGEF11O15085 1522 aa16.16■□□□□ 0.18
CCDC149-202ENST00000389609 PTPN23Q9H3S7 1636 aa16.16■□□□□ 0.18
CCDC149-202ENST00000389609 SUPT6HQ7KZ85 1726 aaKnown RBP16.16■□□□□ 0.18
CCDC149-202ENST00000389609 CCDC18Q5T9S5 1454 aa16.16■□□□□ 0.18
CCDC149-202ENST00000389609 MYOM3Q5VTT5 1437 aa16.15■□□□□ 0.18
CCDC149-202ENST00000389609 ATP1B4Q9UN42 357 aaPredicted RBP16.14■□□□□ 0.17
CCDC149-202ENST00000389609 MTUS2Q5JR59 1369 aa16.13■□□□□ 0.17
CCDC149-202ENST00000389609 TCOF1Q13428 1488 aaKnown RBP16.12■□□□□ 0.17
CCDC149-202ENST00000389609 UGGT2Q9NYU1 1516 aa16.11■□□□□ 0.17
CCDC149-202ENST00000389609 GAPVD1Q14C86 1478 aa16.1■□□□□ 0.17
CCDC149-202ENST00000389609 NCOA2Q15596 1464 aa16.1■□□□□ 0.17
CCDC149-202ENST00000389609 PDS5BQ9NTI5 1447 aa16.1■□□□□ 0.17
CCDC149-202ENST00000389609 SIN3AQ96ST3 1273 aa16.1■□□□□ 0.17
CCDC149-202ENST00000389609 NAIPQ13075 1403 aa16.09■□□□□ 0.17
CCDC149-202ENST00000389609 TONSLQ96HA7 1378 aa16.08■□□□□ 0.16
CCDC149-202ENST00000389609 GCC2Q8IWJ2 1684 aa16.08■□□□□ 0.16
CCDC149-202ENST00000389609 LRRIQ1Q96JM4 1722 aa16.07■□□□□ 0.16
CCDC149-202ENST00000389609 HECW1Q76N89 1606 aa16.06■□□□□ 0.16
CCDC149-202ENST00000389609 MIA2Q96PC5 1412 aa16.05■□□□□ 0.16
CCDC149-202ENST00000389609 TARBP1Q13395 1621 aaKnown RBP16.04■□□□□ 0.16
CCDC149-202ENST00000389609 ANP32CO43423 234 aa16.04■□□□□ 0.16
CCDC149-202ENST00000389609 KCNH8Q96L42 1107 aa16.04■□□□□ 0.16
CCDC149-202ENST00000389609 DDX10Q13206 875 aaKnown RBP16.03■□□□□ 0.16
CCDC149-202ENST00000389609 PTPRKQ15262 1439 aa16.03■□□□□ 0.16
CCDC149-202ENST00000389609 KDM5BQ9UGL1 1544 aa16.02■□□□□ 0.15
CCDC149-202ENST00000389609 PRKCSHP14314 528 aaPredicted RBP16.01■□□□□ 0.15
CCDC149-202ENST00000389609 IQGAP2Q13576 1575 aa15.97■□□□□ 0.15
CCDC149-202ENST00000389609 PBRM1Q86U86 1689 aa15.95■□□□□ 0.14
CCDC149-202ENST00000389609 ADAMTS12P58397 1594 aa15.95■□□□□ 0.14
CCDC149-202ENST00000389609 NEFLP07196 543 aa15.94■□□□□ 0.14
CCDC149-202ENST00000389609 MAGI3Q5TCQ9 1506 aa15.94■□□□□ 0.14
CCDC149-202ENST00000389609 ROCK1Q13464 1354 aa15.93■□□□□ 0.14
CCDC149-202ENST00000389609 EPRSP07814 1512 aaKnown RBP15.93■□□□□ 0.14
CCDC149-202ENST00000389609 WDR62O43379 1518 aa15.93■□□□□ 0.14
CCDC149-202ENST00000389609 HIRIP3Q9BW71 556 aaPredicted RBP15.91■□□□□ 0.14
CCDC149-202ENST00000389609 ERICH6BQ5W0A0 696 aa15.89■□□□□ 0.13
CCDC149-202ENST00000389609 RBM19Q9Y4C8 960 aaKnown RBP15.89■□□□□ 0.13
CCDC149-202ENST00000389609 DENND4BO75064 1496 aaPredicted RBP15.88■□□□□ 0.13
CCDC149-202ENST00000389609 MRC2Q9UBG0 1479 aa15.88■□□□□ 0.13
CCDC149-202ENST00000389609 FKBP8Q14318 412 aa15.85■□□□□ 0.13
CCDC149-202ENST00000389609 DNMT1P26358 1616 aaKnown RBP15.85■□□□□ 0.13
CCDC149-202ENST00000389609 ZNF608Q9ULD9 1512 aaPredicted RBP15.84■□□□□ 0.13
CCDC149-202ENST00000389609 CNTLNQ9NXG0 1405 aa15.83■□□□□ 0.12
CCDC149-202ENST00000389609 RPRD2Q5VT52 1461 aaKnown RBP15.82■□□□□ 0.12
CCDC149-202ENST00000389609 POLR1AO95602 1720 aaPredicted RBP15.82■□□□□ 0.12
CCDC149-202ENST00000389609 KIAA0586Q9BVV6 1533 aa15.81■□□□□ 0.12
CCDC149-202ENST00000389609 EIF4G2P78344 907 aaKnown RBP eCLIP15.81■□□□□ 0.12
CCDC149-202ENST00000389609 NCOA1Q15788 1441 aa15.81■□□□□ 0.12
CCDC149-202ENST00000389609 BCANQ96GW7 911 aa15.81■□□□□ 0.12
CCDC149-202ENST00000389609 IFT140Q96RY7 1462 aa15.8■□□□□ 0.12
CCDC149-202ENST00000389609 TRIM52Q96A61 297 aa15.8■□□□□ 0.12
CCDC149-202ENST00000389609 CDK13Q14004 1512 aaKnown RBP15.8■□□□□ 0.12
CCDC149-202ENST00000389609 KIAA0556O60303 1618 aa15.79■□□□□ 0.12
CCDC149-202ENST00000389609 DAPK1P53355 1430 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms