RNA–Protein interactions for RNA: ENST00000380853.1

TTC39B-203, Transcript of tetratricopeptide repeat domain 39B, humanhuman

TSL 1 (best)

Gene TTC39B, Length 1,326 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39B-203ENST00000380853 FARP1Q9Y4F1 1045 aaPredicted RBP13.01□□□□□ -0.33
TTC39B-203ENST00000380853 LHX8Q68G74 356 aa12.97□□□□□ -0.33
TTC39B-203ENST00000380853 CUX2O14529 1486 aa12.96□□□□□ -0.33
TTC39B-203ENST00000380853 PEG3Q9GZU2 1588 aa12.95□□□□□ -0.34
TTC39B-203ENST00000380853 MROH2BQ7Z745 1585 aa12.93□□□□□ -0.34
TTC39B-203ENST00000380853 POTEIP0CG38 1075 aa12.91□□□□□ -0.34
TTC39B-203ENST00000380853 NESP48681 1621 aa12.9□□□□□ -0.34
TTC39B-203ENST00000380853 LAMC3Q9Y6N6 1575 aa12.85□□□□□ -0.35
TTC39B-203ENST00000380853 EHMT2Q96KQ7 1210 aa12.84□□□□□ -0.35
TTC39B-203ENST00000380853 CREBZFQ9NS37 354 aa12.84□□□□□ -0.35
TTC39B-203ENST00000380853 DNAJC5Q9H3Z4 198 aa12.82□□□□□ -0.36
TTC39B-203ENST00000380853 THOC2Q8NI27 1593 aaKnown RBP12.81□□□□□ -0.36
TTC39B-203ENST00000380853 WIZO95785 1651 aa12.8□□□□□ -0.36
TTC39B-203ENST00000380853 KIF21AQ7Z4S6 1674 aa12.8□□□□□ -0.36
TTC39B-203ENST00000380853 ZRANB1Q9UGI0 708 aa12.79□□□□□ -0.36
TTC39B-203ENST00000380853 SPDYE4A6NLX3 237 aa12.77□□□□□ -0.37
TTC39B-203ENST00000380853 ZNF579Q8NAF0 562 aaKnown RBP12.77□□□□□ -0.37
TTC39B-203ENST00000380853 PDS5BQ9NTI5 1447 aa12.77□□□□□ -0.37
TTC39B-203ENST00000380853 CLCN6P51797 869 aa12.76□□□□□ -0.37
TTC39B-203ENST00000380853 STAG3Q9UJ98 1225 aa12.76□□□□□ -0.37
TTC39B-203ENST00000380853 DCBLD2Q96PD2 775 aa12.74□□□□□ -0.37
TTC39B-203ENST00000380853 CADPSQ9ULU8 1353 aa12.71□□□□□ -0.38
TTC39B-203ENST00000380853 MRC2Q9UBG0 1479 aa12.68□□□□□ -0.38
TTC39B-203ENST00000380853 GALR2O43603 387 aaPredicted RBP12.68□□□□□ -0.38
TTC39B-203ENST00000380853 TOP2AP11388 1531 aaKnown RBP12.67□□□□□ -0.38
TTC39B-203ENST00000380853 CEP164Q9UPV0 1460 aa12.66□□□□□ -0.38
TTC39B-203ENST00000380853 RSF1Q96T23 1441 aaPredicted RBP12.65□□□□□ -0.38
TTC39B-203ENST00000380853 WDR62O43379 1518 aa12.63□□□□□ -0.39
TTC39B-203ENST00000380853 PHF12Q96QT6 1004 aa12.62□□□□□ -0.39
TTC39B-203ENST00000380853 FANCD2Q9BXW9 1451 aa12.61□□□□□ -0.39
TTC39B-203ENST00000380853 PAK3O75914 559 aaPredicted RBP12.59□□□□□ -0.39
TTC39B-203ENST00000380853 MNX1P50219 401 aaPredicted RBP12.59□□□□□ -0.39
TTC39B-203ENST00000380853 CFTRP13569 1480 aa12.58□□□□□ -0.4
TTC39B-203ENST00000380853 PRDM2Q13029 1718 aa12.56□□□□□ -0.4
TTC39B-203ENST00000380853 NPM1P06748 294 aaKnown RBP eCLIP12.53□□□□□ -0.4
TTC39B-203ENST00000380853 POTEB2H3BUK9 544 aa12.5□□□□□ -0.41
TTC39B-203ENST00000380853 URB2Q14146 1524 aaKnown RBP12.48□□□□□ -0.41
TTC39B-203ENST00000380853 OTUD5Q96G74 571 aa12.47□□□□□ -0.41
TTC39B-203ENST00000380853 PELP1Q8IZL8 1130 aaKnown RBP12.46□□□□□ -0.41
TTC39B-203ENST00000380853 CCDC88BA6NC98 1476 aa12.46□□□□□ -0.41
TTC39B-203ENST00000380853 MS4A3Q96HJ5 214 aa12.43□□□□□ -0.42
TTC39B-203ENST00000380853 PROM2Q8N271 834 aa12.39□□□□□ -0.43
TTC39B-203ENST00000380853 TRIM41Q8WV44 630 aa12.37□□□□□ -0.43
TTC39B-203ENST00000380853 TSPYL2Q9H2G4 693 aaPredicted RBP12.37□□□□□ -0.43
TTC39B-203ENST00000380853 TOPBP1Q92547 1522 aa12.37□□□□□ -0.43
TTC39B-203ENST00000380853 IFT140Q96RY7 1462 aa12.37□□□□□ -0.43
TTC39B-203ENST00000380853 PLSCR2Q9NRY7 297 aa12.37□□□□□ -0.43
TTC39B-203ENST00000380853 ASTLQ6HA08 431 aaPredicted RBP12.36□□□□□ -0.43
TTC39B-203ENST00000380853 ABCC8Q09428 1581 aa12.35□□□□□ -0.43
TTC39B-203ENST00000380853 DNMBPQ6XZF7 1577 aa12.35□□□□□ -0.43
TTC39B-203ENST00000380853 ATMINO43313 823 aaPredicted RBP12.34□□□□□ -0.43
TTC39B-203ENST00000380853 METRNQ9UJH8 293 aa12.34□□□□□ -0.43
TTC39B-203ENST00000380853 EIF4G3O43432 1585 aaKnown RBP12.32□□□□□ -0.44
TTC39B-203ENST00000380853 ZNF608Q9ULD9 1512 aaPredicted RBP12.31□□□□□ -0.44
TTC39B-203ENST00000380853 CCDC61Q9Y6R9 512 aa12.31□□□□□ -0.44
TTC39B-203ENST00000380853 POTEJP0CG39 1038 aa12.28□□□□□ -0.44
TTC39B-203ENST00000380853 SLC39A7Q92504 469 aa12.28□□□□□ -0.44
TTC39B-203ENST00000380853 C7P10643 843 aa12.26□□□□□ -0.45
TTC39B-203ENST00000380853 ATN1P54259 1190 aaPredicted RBP12.25□□□□□ -0.45
TTC39B-203ENST00000380853 POTEMA6NI47 508 aa12.24□□□□□ -0.45
TTC39B-203ENST00000380853 KIF12Q96FN5 646 aa12.24□□□□□ -0.45
TTC39B-203ENST00000380853 TARBP1Q13395 1621 aaKnown RBP12.24□□□□□ -0.45
TTC39B-203ENST00000380853 POLA1P09884 1462 aaPredicted RBP12.24□□□□□ -0.45
TTC39B-203ENST00000380853 CHD1O14646 1710 aa12.23□□□□□ -0.45
TTC39B-203ENST00000380853 TRPC6Q9Y210 931 aa12.22□□□□□ -0.45
TTC39B-203ENST00000380853 RIMBP3CA6NJZ7 1639 aa12.22□□□□□ -0.45
TTC39B-203ENST00000380853 RIMBP3BA6NNM3 1639 aa12.22□□□□□ -0.45
TTC39B-203ENST00000380853 RIMBP3Q9UFD9 1639 aa12.22□□□□□ -0.45
TTC39B-203ENST00000380853 AQRO60306 1485 aaKnown RBP eCLIP12.2□□□□□ -0.46
TTC39B-203ENST00000380853 MIER1Q8N108 512 aa12.2□□□□□ -0.46
TTC39B-203ENST00000380853 FGD5Q6ZNL6 1462 aa12.19□□□□□ -0.46
TTC39B-203ENST00000380853 POTEGQ6S5H5 508 aa12.19□□□□□ -0.46
TTC39B-203ENST00000380853 RASEFQ8IZ41 740 aa12.19□□□□□ -0.46
TTC39B-203ENST00000380853 BMP2KQ9NSY1 1161 aaPredicted RBP12.18□□□□□ -0.46
TTC39B-203ENST00000380853 RAD54L2Q9Y4B4 1467 aa12.18□□□□□ -0.46
TTC39B-203ENST00000380853 SOGA1O94964 1423 aa12.17□□□□□ -0.46
TTC39B-203ENST00000380853 MAP3K13O43283 966 aa12.17□□□□□ -0.46
TTC39B-203ENST00000380853 ARHGEF11O15085 1522 aa12.17□□□□□ -0.46
TTC39B-203ENST00000380853 WDR97A6NE52 1622 aa12.17□□□□□ -0.46
TTC39B-203ENST00000380853 CUX1P39880 1505 aa12.16□□□□□ -0.46
TTC39B-203ENST00000380853 SUPT5HO00267 1087 aaKnown RBP12.16□□□□□ -0.46
TTC39B-203ENST00000380853 PLEKHG5O94827 1062 aa12.16□□□□□ -0.46
TTC39B-203ENST00000380853 POTEFA5A3E0 1075 aa12.14□□□□□ -0.47
TTC39B-203ENST00000380853 SNAPC4Q5SXM2 1469 aa12.14□□□□□ -0.47
TTC39B-203ENST00000380853 TDRD9Q8NDG6 1382 aaKnown RBP12.14□□□□□ -0.47
TTC39B-203ENST00000380853 MAMSTRQ6ZN01 415 aa12.12□□□□□ -0.47
TTC39B-203ENST00000380853 PBRM1Q86U86 1689 aa12.1□□□□□ -0.47
TTC39B-203ENST00000380853 TIE1P35590 1138 aa12.1□□□□□ -0.47
TTC39B-203ENST00000380853 GRIN2BQ13224 1484 aa12.09□□□□□ -0.47
TTC39B-203ENST00000380853 MAGI1Q96QZ7 1491 aaPredicted RBP12.09□□□□□ -0.47
TTC39B-203ENST00000380853 SYNJ1O43426 1573 aa12.09□□□□□ -0.47
TTC39B-203ENST00000380853 SCUBE2Q9NQ36 999 aa12.09□□□□□ -0.47
TTC39B-203ENST00000380853 LCE2DQ5TA82 110 aaPredicted RBP12.08□□□□□ -0.48
TTC39B-203ENST00000380853 TTLL13PA6NNM8 815 aa12.07□□□□□ -0.48
TTC39B-203ENST00000380853 PLCD3Q8N3E9 789 aa12.07□□□□□ -0.48
TTC39B-203ENST00000380853 CHMP7Q8WUX9 453 aaPredicted RBP12.06□□□□□ -0.48
TTC39B-203ENST00000380853 CYB5RLQ6IPT4 315 aa12.05□□□□□ -0.48
TTC39B-203ENST00000380853 SYNJ2O15056 1496 aa12.04□□□□□ -0.48
TTC39B-203ENST00000380853 GAPVD1Q14C86 1478 aa12.04□□□□□ -0.48
TTC39B-203ENST00000380853 ARAP1Q96P48 1450 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms