RNA–Protein interactions for RNA: ENST00000380850.8

TTC39B-202, Transcript of tetratricopeptide repeat domain 39B, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TTC39B, Length 3,221 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39B-202ENST00000380850 BCANQ96GW7 911 aa18.41■□□□□ 0.54
TTC39B-202ENST00000380850 CCNB3Q8WWL7 1395 aa18.4■□□□□ 0.54
TTC39B-202ENST00000380850 RRP7BPQ9NSQ0 103 aa18.4■□□□□ 0.54
TTC39B-202ENST00000380850 DHX57Q6P158 1386 aaKnown RBP18.4■□□□□ 0.54
TTC39B-202ENST00000380850 FANCD2Q9BXW9 1451 aa18.39■□□□□ 0.53
TTC39B-202ENST00000380850 CC2D2AQ9P2K1 1620 aa18.38■□□□□ 0.53
TTC39B-202ENST00000380850 TRIM52Q96A61 297 aa18.38■□□□□ 0.53
TTC39B-202ENST00000380850 SENP3-EIF4A1A0A087X0R7 540 aa18.36■□□□□ 0.53
TTC39B-202ENST00000380850 RAB3GAP2Q9H2M9 1393 aa18.34■□□□□ 0.53
TTC39B-202ENST00000380850 PHLDB1Q86UU1 1377 aa18.33■□□□□ 0.52
TTC39B-202ENST00000380850 FOXD1Q16676 465 aa18.32■□□□□ 0.52
TTC39B-202ENST00000380850 POLR3GLQ9BT43 218 aa18.32■□□□□ 0.52
TTC39B-202ENST00000380850 ZNF777Q9ULD5 760 aaPredicted RBP18.28■□□□□ 0.52
TTC39B-202ENST00000380850 MTUS2Q5JR59 1369 aa18.26■□□□□ 0.51
TTC39B-202ENST00000380850 HMGXB3Q12766 1538 aa18.26■□□□□ 0.51
TTC39B-202ENST00000380850 ZNF326Q5BKZ1 582 aaKnown RBP18.23■□□□□ 0.51
TTC39B-202ENST00000380850 BIVM-ERCC5R4GMW8 1640 aa18.19■□□□□ 0.5
TTC39B-202ENST00000380850 POLA1P09884 1462 aaPredicted RBP18.19■□□□□ 0.5
TTC39B-202ENST00000380850 AQRO60306 1485 aaKnown RBP eCLIP18.16■□□□□ 0.5
TTC39B-202ENST00000380850 ERICH3Q5RHP9 1530 aa18.14■□□□□ 0.49
TTC39B-202ENST00000380850 TOPBP1Q92547 1522 aa18.13■□□□□ 0.49
TTC39B-202ENST00000380850 SETD5Q9C0A6 1442 aa18.1■□□□□ 0.49
TTC39B-202ENST00000380850 ZNF644Q9H582 1327 aaPredicted RBP18.09■□□□□ 0.49
TTC39B-202ENST00000380850 PDS5BQ9NTI5 1447 aa18.08■□□□□ 0.49
TTC39B-202ENST00000380850 LRRC9Q6ZRR7 1453 aa18.07■□□□□ 0.48
TTC39B-202ENST00000380850 IRX6P78412 446 aaPredicted RBP18.06■□□□□ 0.48
TTC39B-202ENST00000380850 TONSLQ96HA7 1378 aa18.05■□□□□ 0.48
TTC39B-202ENST00000380850 RRBP1Q9P2E9 1410 aaKnown RBP18.05■□□□□ 0.48
TTC39B-202ENST00000380850 URB2Q14146 1524 aaKnown RBP18.04■□□□□ 0.48
TTC39B-202ENST00000380850 CHMP7Q8WUX9 453 aaPredicted RBP18.03■□□□□ 0.48
TTC39B-202ENST00000380850 FHAD1B1AJZ9 1412 aa18.02■□□□□ 0.48
TTC39B-202ENST00000380850 PCF11O94913 1555 aaKnown RBP18.01■□□□□ 0.47
TTC39B-202ENST00000380850 GAPVD1Q14C86 1478 aa18.01■□□□□ 0.47
TTC39B-202ENST00000380850 TIAM1Q13009 1591 aa17.98■□□□□ 0.47
TTC39B-202ENST00000380850 FKBP8Q14318 412 aa17.96■□□□□ 0.47
TTC39B-202ENST00000380850 ANP32CO43423 234 aa17.94■□□□□ 0.46
TTC39B-202ENST00000380850 PTPRKQ15262 1439 aa17.94■□□□□ 0.46
TTC39B-202ENST00000380850 PPP1R15AO75807 674 aaPredicted RBP17.94■□□□□ 0.46
TTC39B-202ENST00000380850 WDR97A6NE52 1622 aa17.92■□□□□ 0.46
TTC39B-202ENST00000380850 KDM2AQ9Y2K7 1162 aa17.92■□□□□ 0.46
TTC39B-202ENST00000380850 SUPT16HQ9Y5B9 1047 aaKnown RBP17.9■□□□□ 0.46
TTC39B-202ENST00000380850 ZNF608Q9ULD9 1512 aaPredicted RBP17.9■□□□□ 0.46
TTC39B-202ENST00000380850 DNMBPQ6XZF7 1577 aa17.89■□□□□ 0.46
TTC39B-202ENST00000380850 SLC4A1APQ9BWU0 796 aaKnown RBP17.89■□□□□ 0.45
TTC39B-202ENST00000380850 CLSPNQ9HAW4 1339 aa17.88■□□□□ 0.45
TTC39B-202ENST00000380850 FAM9BQ8IZU0 186 aa17.88■□□□□ 0.45
TTC39B-202ENST00000380850 ABCA10Q8WWZ4 1543 aa17.88■□□□□ 0.45
TTC39B-202ENST00000380850 FGD6Q6ZV73 1430 aa17.88■□□□□ 0.45
TTC39B-202ENST00000380850 MAPKBP1O60336 1514 aa17.87■□□□□ 0.45
TTC39B-202ENST00000380850 SENP3Q9H4L4 574 aaPredicted RBP17.87■□□□□ 0.45
TTC39B-202ENST00000380850 ERCC6Q03468 1493 aa17.86■□□□□ 0.45
TTC39B-202ENST00000380850 HNRNPUQ00839 825 aaKnown RBP eCLIP17.86■□□□□ 0.45
TTC39B-202ENST00000380850 CDK13Q14004 1512 aaKnown RBP17.86■□□□□ 0.45
TTC39B-202ENST00000380850 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.86■□□□□ 0.459e-8■□□□□ 10.2
TTC39B-202ENST00000380850 FMN1Q68DA7 1419 aa17.85■□□□□ 0.45
TTC39B-202ENST00000380850 HSPA5P11021 654 aaKnown RBP17.83■□□□□ 0.45
TTC39B-202ENST00000380850 L3MBTL2Q969R5 705 aa17.83■□□□□ 0.45
TTC39B-202ENST00000380850 NCOA2Q15596 1464 aa17.83■□□□□ 0.45
TTC39B-202ENST00000380850 CFDP1Q9UEE9 299 aaPredicted RBP17.83■□□□□ 0.44
TTC39B-202ENST00000380850 CASKIN1Q8WXD9 1431 aa17.83■□□□□ 0.44
TTC39B-202ENST00000380850 CCDC18Q5T9S5 1454 aa17.82■□□□□ 0.44
TTC39B-202ENST00000380850 MPHOSPH9Q99550 1183 aa17.82■□□□□ 0.44
TTC39B-202ENST00000380850 SALL2Q9Y467 1007 aaPredicted RBP17.81■□□□□ 0.44
TTC39B-202ENST00000380850 CCDC184Q52MB2 194 aa17.79■□□□□ 0.44
TTC39B-202ENST00000380850 MYT1LQ9UL68 1186 aa17.79■□□□□ 0.44
TTC39B-202ENST00000380850 RGL3Q3MIN7 710 aa17.78■□□□□ 0.44
TTC39B-202ENST00000380850 NEFLP07196 543 aa17.77■□□□□ 0.43
TTC39B-202ENST00000380850 PELP1Q8IZL8 1130 aaKnown RBP17.75■□□□□ 0.43
TTC39B-202ENST00000380850 HNRNPMP52272 730 aaKnown RBP eCLIP17.74■□□□□ 0.439e-7■■■■□ 25.4
TTC39B-202ENST00000380850 C11orf95C9JLR9 678 aaPredicted RBP17.74■□□□□ 0.43
TTC39B-202ENST00000380850 FYCO1Q9BQS8 1478 aa17.73■□□□□ 0.43
TTC39B-202ENST00000380850 KIF21AQ7Z4S6 1674 aa17.73■□□□□ 0.43
TTC39B-202ENST00000380850 JPH4Q96JJ6 628 aa17.73■□□□□ 0.43
TTC39B-202ENST00000380850 MYOM3Q5VTT5 1437 aa17.72■□□□□ 0.43
TTC39B-202ENST00000380850 CDK11AQ9UQ88 783 aaPredicted RBP17.7■□□□□ 0.42
TTC39B-202ENST00000380850 PRG4Q92954 1404 aaPredicted RBP17.7■□□□□ 0.42
TTC39B-202ENST00000380850 NBPF8Q3BBV2 869 aa17.7■□□□□ 0.42
TTC39B-202ENST00000380850 NAIPQ13075 1403 aa17.69■□□□□ 0.42
TTC39B-202ENST00000380850 EIF4G2P78344 907 aaKnown RBP eCLIP17.69■□□□□ 0.42
TTC39B-202ENST00000380850 PRDM2Q13029 1718 aa17.69■□□□□ 0.42
TTC39B-202ENST00000380850 PKD2Q13563 968 aa17.68■□□□□ 0.42
TTC39B-202ENST00000380850 MAGI3Q5TCQ9 1506 aa17.67■□□□□ 0.42
TTC39B-202ENST00000380850 SNAPC4Q5SXM2 1469 aa17.67■□□□□ 0.42
TTC39B-202ENST00000380850 MRS2Q9HD23 443 aa17.66■□□□□ 0.42
TTC39B-202ENST00000380850 PLEKHD1A6NEE1 506 aa17.66■□□□□ 0.42
TTC39B-202ENST00000380850 WASHC2AQ641Q2 1341 aa17.65■□□□□ 0.42
TTC39B-202ENST00000380850 PLB1Q6P1J6 1458 aa17.63■□□□□ 0.41
TTC39B-202ENST00000380850 LAMC3Q9Y6N6 1575 aa17.62■□□□□ 0.41
TTC39B-202ENST00000380850 THOC2Q8NI27 1593 aaKnown RBP17.61■□□□□ 0.41
TTC39B-202ENST00000380850 EPRSP07814 1512 aaKnown RBP17.6■□□□□ 0.41
TTC39B-202ENST00000380850 UACAQ9BZF9 1416 aa17.59■□□□□ 0.41
TTC39B-202ENST00000380850 GRIN2BQ13224 1484 aa17.58■□□□□ 0.4
TTC39B-202ENST00000380850 EFCAB5A4FU69 1503 aa17.57■□□□□ 0.4
TTC39B-202ENST00000380850 HFM1A2PYH4 1435 aa17.57■□□□□ 0.4
TTC39B-202ENST00000380850 TSPY4P0CV99 314 aa17.57■□□□□ 0.4
TTC39B-202ENST00000380850 TSPY10P0CW01 314 aa17.57■□□□□ 0.4
TTC39B-202ENST00000380850 DCAF11Q8TEB1 546 aa17.57■□□□□ 0.4
TTC39B-202ENST00000380850 MRC2Q9UBG0 1479 aa17.57■□□□□ 0.4
TTC39B-202ENST00000380850 KDM6BO15054 1643 aa17.55■□□□□ 0.4
TTC39B-202ENST00000380850 TSHZ2Q9NRE2 1034 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms