RNA–Protein interactions for RNA: ENST00000380654.8

EBF1-202, Transcript of early B cell factor 1, humanhuman

TSL 1 (best) BASIC

Gene EBF1, Length 2,345 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1-202ENST00000380654 LRRC9Q6ZRR7 1453 aa29.58■■■□□ 2.33
EBF1-202ENST00000380654 PCF11O94913 1555 aaKnown RBP29.58■■■□□ 2.33
EBF1-202ENST00000380654 LAMC3Q9Y6N6 1575 aa29.58■■■□□ 2.33
EBF1-202ENST00000380654 DNAJC5BQ9UF47 199 aa29.57■■■□□ 2.32
EBF1-202ENST00000380654 FHAD1B1AJZ9 1412 aa29.55■■■□□ 2.32
EBF1-202ENST00000380654 FHOD3Q2V2M9 1422 aa29.55■■■□□ 2.32
EBF1-202ENST00000380654 CUL7Q14999 1698 aa29.54■■■□□ 2.32
EBF1-202ENST00000380654 ATP1B4Q9UN42 357 aaPredicted RBP29.53■■■□□ 2.32
EBF1-202ENST00000380654 CENPBP07199 599 aaPredicted RBP29.52■■■□□ 2.32
EBF1-202ENST00000380654 MIER1Q8N108 512 aa29.51■■■□□ 2.32
EBF1-202ENST00000380654 PHLDB1Q86UU1 1377 aa29.51■■■□□ 2.32
EBF1-202ENST00000380654 WDR97A6NE52 1622 aa29.51■■■□□ 2.31
EBF1-202ENST00000380654 CFAP43Q8NDM7 1665 aa29.5■■■□□ 2.31
EBF1-202ENST00000380654 CTTNBP2Q8WZ74 1663 aa29.48■■■□□ 2.31
EBF1-202ENST00000380654 TDRD9Q8NDG6 1382 aaKnown RBP29.45■■■□□ 2.31
EBF1-202ENST00000380654 RAB3GAP2Q9H2M9 1393 aa29.44■■■□□ 2.3
EBF1-202ENST00000380654 EFCAB5A4FU69 1503 aa29.43■■■□□ 2.3
EBF1-202ENST00000380654 YTHDC1Q96MU7 727 aaKnown RBP29.41■■■□□ 2.3
EBF1-202ENST00000380654 ABCA5Q8WWZ7 1642 aa29.39■■■□□ 2.3
EBF1-202ENST00000380654 FYCO1Q9BQS8 1478 aa29.39■■■□□ 2.29
EBF1-202ENST00000380654 FAM50AQ14320 339 aaKnown RBP29.38■■■□□ 2.29
EBF1-202ENST00000380654 KIF21AQ7Z4S6 1674 aa29.38■■■□□ 2.29
EBF1-202ENST00000380654 PDS5BQ9NTI5 1447 aa29.37■■■□□ 2.29
EBF1-202ENST00000380654 GTF3C3Q9Y5Q9 886 aa29.37■■■□□ 2.29
EBF1-202ENST00000380654 CASKIN1Q8WXD9 1431 aa29.36■■■□□ 2.29
EBF1-202ENST00000380654 GAPVD1Q14C86 1478 aa29.34■■■□□ 2.29
EBF1-202ENST00000380654 SETD5Q9C0A6 1442 aa29.31■■■□□ 2.28
EBF1-202ENST00000380654 MAPKBP1O60336 1514 aa29.31■■■□□ 2.28
EBF1-202ENST00000380654 AQRO60306 1485 aaKnown RBP eCLIP29.3■■■□□ 2.28
EBF1-202ENST00000380654 FMN1Q68DA7 1419 aa29.25■■■□□ 2.27
EBF1-202ENST00000380654 SNAPC4Q5SXM2 1469 aa29.25■■■□□ 2.27
EBF1-202ENST00000380654 SAMD9Q5K651 1589 aa29.22■■■□□ 2.27
EBF1-202ENST00000380654 TARBP1Q13395 1621 aaKnown RBP29.2■■■□□ 2.27
EBF1-202ENST00000380654 LRRIQ1Q96JM4 1722 aa29.19■■■□□ 2.26
EBF1-202ENST00000380654 MTUS2Q5JR59 1369 aa29.11■■■□□ 2.25
EBF1-202ENST00000380654 FGD6Q6ZV73 1430 aa29.1■■■□□ 2.25
EBF1-202ENST00000380654 SIN3AQ96ST3 1273 aa29.1■■■□□ 2.25
EBF1-202ENST00000380654 GRIN2BQ13224 1484 aa29.08■■■□□ 2.25
EBF1-202ENST00000380654 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.08■■■□□ 2.25
EBF1-202ENST00000380654 PBRM1Q86U86 1689 aa29.07■■■□□ 2.24
EBF1-202ENST00000380654 NCOA2Q15596 1464 aa29■■■□□ 2.23
EBF1-202ENST00000380654 PTPRKQ15262 1439 aa28.98■■■□□ 2.23
EBF1-202ENST00000380654 THOC2Q8NI27 1593 aaKnown RBP28.97■■■□□ 2.23
EBF1-202ENST00000380654 MRC2Q9UBG0 1479 aa28.95■■■□□ 2.22
EBF1-202ENST00000380654 SUPT6HQ7KZ85 1726 aaKnown RBP28.94■■■□□ 2.22
EBF1-202ENST00000380654 ADAMTS12P58397 1594 aa28.94■■■□□ 2.22
EBF1-202ENST00000380654 MAGI3Q5TCQ9 1506 aa28.94■■■□□ 2.22
EBF1-202ENST00000380654 MYOM3Q5VTT5 1437 aa28.93■■■□□ 2.22
EBF1-202ENST00000380654 EHBP1L1Q8N3D4 1523 aa28.91■■■□□ 2.22
EBF1-202ENST00000380654 IQGAP2Q13576 1575 aa28.91■■■□□ 2.22
EBF1-202ENST00000380654 CCDC18Q5T9S5 1454 aa28.89■■■□□ 2.22
EBF1-202ENST00000380654 HFM1A2PYH4 1435 aa28.86■■■□□ 2.21
EBF1-202ENST00000380654 UGGT2Q9NYU1 1516 aa28.86■■■□□ 2.21
EBF1-202ENST00000380654 PTPN23Q9H3S7 1636 aa28.85■■■□□ 2.21
EBF1-202ENST00000380654 ZNF608Q9ULD9 1512 aaPredicted RBP28.85■■■□□ 2.21
EBF1-202ENST00000380654 PELP1Q8IZL8 1130 aaKnown RBP28.85■■■□□ 2.21
EBF1-202ENST00000380654 ARHGEF11O15085 1522 aa28.82■■■□□ 2.2
EBF1-202ENST00000380654 HECW1Q76N89 1606 aa28.82■■■□□ 2.2
EBF1-202ENST00000380654 NAIPQ13075 1403 aa28.81■■■□□ 2.2
EBF1-202ENST00000380654 ARID3CA6NKF2 412 aa28.8■■■□□ 2.2
EBF1-202ENST00000380654 TIMELESSQ9UNS1 1208 aa28.78■■■□□ 2.2
EBF1-202ENST00000380654 EPRSP07814 1512 aaKnown RBP28.78■■■□□ 2.2
EBF1-202ENST00000380654 CDK13Q14004 1512 aaKnown RBP28.78■■■□□ 2.2
EBF1-202ENST00000380654 UACAQ9BZF9 1416 aa28.77■■■□□ 2.2
EBF1-202ENST00000380654 PPP1R15AO75807 674 aaPredicted RBP28.76■■■□□ 2.2
EBF1-202ENST00000380654 IFT140Q96RY7 1462 aa28.75■■■□□ 2.19
EBF1-202ENST00000380654 HIRIP3Q9BW71 556 aaPredicted RBP28.73■■■□□ 2.19
EBF1-202ENST00000380654 WDR62O43379 1518 aa28.73■■■□□ 2.19
EBF1-202ENST00000380654 CHIC2Q9UKJ5 165 aa28.71■■■□□ 2.19
EBF1-202ENST00000380654 DDX10Q13206 875 aaKnown RBP28.7■■■□□ 2.19
EBF1-202ENST00000380654 KCNH8Q96L42 1107 aa28.7■■■□□ 2.19
EBF1-202ENST00000380654 RRP7BPQ9NSQ0 103 aa28.69■■■□□ 2.18
EBF1-202ENST00000380654 TCOF1Q13428 1488 aaKnown RBP28.67■■■□□ 2.18
EBF1-202ENST00000380654 TONSLQ96HA7 1378 aa28.67■■■□□ 2.18
EBF1-202ENST00000380654 EIF4G3O43432 1585 aaKnown RBP28.62■■■□□ 2.17
EBF1-202ENST00000380654 DISP1Q96F81 1524 aa28.62■■■□□ 2.17
EBF1-202ENST00000380654 KIAA0586Q9BVV6 1533 aa28.61■■■□□ 2.17
EBF1-202ENST00000380654 KIAA0556O60303 1618 aa28.61■■■□□ 2.17
EBF1-202ENST00000380654 KDM6BO15054 1643 aa28.59■■■□□ 2.17
EBF1-202ENST00000380654 GCC2Q8IWJ2 1684 aa28.59■■■□□ 2.17
EBF1-202ENST00000380654 GRIN2AQ12879 1464 aa28.58■■■□□ 2.17
EBF1-202ENST00000380654 MIA2Q96PC5 1412 aa28.55■■■□□ 2.16
EBF1-202ENST00000380654 DENND4BO75064 1496 aaPredicted RBP28.53■■■□□ 2.16
EBF1-202ENST00000380654 NUP153P49790 1475 aaKnown RBP28.52■■■□□ 2.16
EBF1-202ENST00000380654 ERCC6Q03468 1493 aa28.52■■■□□ 2.16
EBF1-202ENST00000380654 TRIM52Q96A61 297 aa28.51■■■□□ 2.15
EBF1-202ENST00000380654 KDM5BQ9UGL1 1544 aa28.51■■■□□ 2.15
EBF1-202ENST00000380654 RAPGEF6Q8TEU7 1601 aa28.48■■■□□ 2.15
EBF1-202ENST00000380654 AKNAQ7Z591 1439 aa28.48■■■□□ 2.15
EBF1-202ENST00000380654 ZNF644Q9H582 1327 aaPredicted RBP28.44■■■□□ 2.14
EBF1-202ENST00000380654 CEP170Q5SW79 1584 aa28.43■■■□□ 2.14
EBF1-202ENST00000380654 CHMP7Q8WUX9 453 aaPredicted RBP28.42■■■□□ 2.14
EBF1-202ENST00000380654 DAPK1P53355 1430 aa28.4■■■□□ 2.14
EBF1-202ENST00000380654 FBLN2P98095 1184 aa28.4■■■□□ 2.14
EBF1-202ENST00000380654 MAGI1Q96QZ7 1491 aaPredicted RBP28.4■■■□□ 2.14
EBF1-202ENST00000380654 MPHOSPH9Q99550 1183 aa28.4■■■□□ 2.14
EBF1-202ENST00000380654 FOXD1Q16676 465 aa28.39■■■□□ 2.14
EBF1-202ENST00000380654 SUPT16HQ9Y5B9 1047 aaKnown RBP28.37■■■□□ 2.13
EBF1-202ENST00000380654 ABCC5O15440 1437 aa28.37■■■□□ 2.13
EBF1-202ENST00000380654 SYNJ2O15056 1496 aa28.36■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms