RNA–Protein interactions for RNA: ENST00000379925.7

RPGRIP1L-202, Transcript of RPGRIP1 like, humanhuman

TSL 1 (best) BASIC

Gene RPGRIP1L, Length 5,297 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRIP1L-202ENST00000379925 CCDC136Q96JN2 1154 aa10.07□□□□□ -0.8
RPGRIP1L-202ENST00000379925 FBXO3Q9UK99 471 aa10.06□□□□□ -0.8
RPGRIP1L-202ENST00000379925 DHX37Q8IY37 1157 aaKnown RBP10.06□□□□□ -0.8
RPGRIP1L-202ENST00000379925 CHMP4AQ9BY43 222 aa10.06□□□□□ -0.8
RPGRIP1L-202ENST00000379925 PPARGC1BQ86YN6 1023 aaKnown RBP10.06□□□□□ -0.8
RPGRIP1L-202ENST00000379925 CUX2O14529 1486 aa10.05□□□□□ -0.8
RPGRIP1L-202ENST00000379925 CHMP7Q8WUX9 453 aaPredicted RBP10.05□□□□□ -0.8
RPGRIP1L-202ENST00000379925 CCER1Q8TC90 406 aaPredicted RBP10.03□□□□□ -0.8
RPGRIP1L-202ENST00000379925 CFTRP13569 1480 aa10.03□□□□□ -0.8
RPGRIP1L-202ENST00000379925 ARID3AQ99856 593 aa10.02□□□□□ -0.8
RPGRIP1L-202ENST00000379925 SOGA1O94964 1423 aa10.02□□□□□ -0.81
RPGRIP1L-202ENST00000379925 ANP32EQ9BTT0 268 aa10.02□□□□□ -0.81
RPGRIP1L-202ENST00000379925 BRD2P25440 801 aaKnown RBP10.01□□□□□ -0.81
RPGRIP1L-202ENST00000379925 TNIKQ9UKE5 1360 aa10.01□□□□□ -0.81
RPGRIP1L-202ENST00000379925 HMGB1P09429 215 aaKnown RBP10.01□□□□□ -0.81
RPGRIP1L-202ENST00000379925 CLIP1P30622 1438 aa10□□□□□ -0.81
RPGRIP1L-202ENST00000379925 AEBP2Q6ZN18 517 aaPredicted RBP9.99□□□□□ -0.81
RPGRIP1L-202ENST00000379925 SLC4A1APQ9BWU0 796 aaKnown RBP9.99□□□□□ -0.81
RPGRIP1L-202ENST00000379925 NAP1L5Q96NT1 182 aaPredicted RBP9.98□□□□□ -0.81
RPGRIP1L-202ENST00000379925 P3H3Q8IVL6 736 aa9.98□□□□□ -0.81
RPGRIP1L-202ENST00000379925 CARMIL1Q5VZK9 1371 aa9.98□□□□□ -0.81
RPGRIP1L-202ENST00000379925 MYT1LQ9UL68 1186 aa9.98□□□□□ -0.81
RPGRIP1L-202ENST00000379925 PLCB2Q00722 1185 aa9.96□□□□□ -0.81
RPGRIP1L-202ENST00000379925 ANO8Q9HCE9 1232 aaPredicted RBP9.96□□□□□ -0.81
RPGRIP1L-202ENST00000379925 RTL5Q5HYW3 569 aaPredicted RBP9.96□□□□□ -0.82
RPGRIP1L-202ENST00000379925 CEP162Q5TB80 1403 aa9.96□□□□□ -0.82
RPGRIP1L-202ENST00000379925 LAMC3Q9Y6N6 1575 aa9.95□□□□□ -0.82
RPGRIP1L-202ENST00000379925 CFAP44Q96MT7 982 aa9.95□□□□□ -0.82
RPGRIP1L-202ENST00000379925 BCL11BQ9C0K0 894 aaPredicted RBP9.95□□□□□ -0.82
RPGRIP1L-202ENST00000379925 SCAF1Q9H7N4 1312 aaKnown RBP9.95□□□□□ -0.82
RPGRIP1L-202ENST00000379925 ITGAEP38570 1179 aa9.93□□□□□ -0.82
RPGRIP1L-202ENST00000379925 HSP90B1P14625 803 aaKnown RBP9.93□□□□□ -0.82
RPGRIP1L-202ENST00000379925 FAM50AQ14320 339 aaKnown RBP9.92□□□□□ -0.82
RPGRIP1L-202ENST00000379925 FGD5Q6ZNL6 1462 aa9.92□□□□□ -0.82
RPGRIP1L-202ENST00000379925 MRC2Q9UBG0 1479 aa9.91□□□□□ -0.82
RPGRIP1L-202ENST00000379925 CCDC9Q9Y3X0 531 aaKnown RBP9.9□□□□□ -0.82
RPGRIP1L-202ENST00000379925 TDRD9Q8NDG6 1382 aaKnown RBP9.89□□□□□ -0.83
RPGRIP1L-202ENST00000379925 TMEM132AQ24JP5 1023 aa9.89□□□□□ -0.83
RPGRIP1L-202ENST00000379925 RAPGEF2Q9Y4G8 1499 aa9.89□□□□□ -0.83
RPGRIP1L-202ENST00000379925 TOP2BQ02880 1626 aa9.88□□□□□ -0.83
RPGRIP1L-202ENST00000379925 NESP48681 1621 aa9.88□□□□□ -0.83
RPGRIP1L-202ENST00000379925 HRCP23327 699 aa9.88□□□□□ -0.83
RPGRIP1L-202ENST00000379925 NPM1P06748 294 aaKnown RBP eCLIP9.87□□□□□ -0.83
RPGRIP1L-202ENST00000379925 DNMBPQ6XZF7 1577 aa9.87□□□□□ -0.83
RPGRIP1L-202ENST00000379925 FHAD1B1AJZ9 1412 aa9.86□□□□□ -0.83
RPGRIP1L-202ENST00000379925 PAXIP1Q6ZW49 1069 aaPredicted RBP9.86□□□□□ -0.83
RPGRIP1L-202ENST00000379925 ZNF526Q8TF50 670 aaPredicted RBP9.85□□□□□ -0.83
RPGRIP1L-202ENST00000379925 SYNJ1O43426 1573 aa9.85□□□□□ -0.83
RPGRIP1L-202ENST00000379925 TOPBP1Q92547 1522 aa9.84□□□□□ -0.83
RPGRIP1L-202ENST00000379925 MTUS2Q5JR59 1369 aa9.83□□□□□ -0.84
RPGRIP1L-202ENST00000379925 GAPVD1Q14C86 1478 aa9.83□□□□□ -0.84
RPGRIP1L-202ENST00000379925 ARID4BQ4LE39 1312 aaPredicted RBP9.83□□□□□ -0.84
RPGRIP1L-202ENST00000379925 IFT140Q96RY7 1462 aa9.83□□□□□ -0.84
RPGRIP1L-202ENST00000379925 ARID3CA6NKF2 412 aa9.83□□□□□ -0.84
RPGRIP1L-202ENST00000379925 CUX1P39880 1505 aa9.82□□□□□ -0.84
RPGRIP1L-202ENST00000379925 CARMIL2Q6F5E8 1435 aa9.82□□□□□ -0.84
RPGRIP1L-202ENST00000379925 RAD54L2Q9Y4B4 1467 aa9.81□□□□□ -0.84
RPGRIP1L-202ENST00000379925 IRX6P78412 446 aaPredicted RBP9.81□□□□□ -0.84
RPGRIP1L-202ENST00000379925 DNAJC5BQ9UF47 199 aa9.79□□□□□ -0.84
RPGRIP1L-202ENST00000379925 PTMSP20962 102 aa9.79□□□□□ -0.84
RPGRIP1L-202ENST00000379925 DEKP35659 375 aaKnown RBP9.78□□□□□ -0.84
RPGRIP1L-202ENST00000379925 POLA1P09884 1462 aaPredicted RBP9.78□□□□□ -0.84
RPGRIP1L-202ENST00000379925 RUSC2Q8N2Y8 1516 aa9.78□□□□□ -0.84
RPGRIP1L-202ENST00000379925 GRIN2BQ13224 1484 aa9.78□□□□□ -0.84
RPGRIP1L-202ENST00000379925 FMN1Q68DA7 1419 aa9.78□□□□□ -0.84
RPGRIP1L-202ENST00000379925 VPS8Q8N3P4 1428 aa9.78□□□□□ -0.84
RPGRIP1L-202ENST00000379925 IGF1RP08069 1367 aa9.77□□□□□ -0.85
RPGRIP1L-202ENST00000379925 KIF21BO75037 1637 aa9.77□□□□□ -0.85
RPGRIP1L-202ENST00000379925 NBR1Q14596 966 aa9.77□□□□□ -0.85
RPGRIP1L-202ENST00000379925 ERICH3Q5RHP9 1530 aa9.77□□□□□ -0.85
RPGRIP1L-202ENST00000379925 PLEKHD1A6NEE1 506 aa9.76□□□□□ -0.85
RPGRIP1L-202ENST00000379925 TRIM52Q96A61 297 aa9.76□□□□□ -0.85
RPGRIP1L-202ENST00000379925 BIVM-ERCC5R4GMW8 1640 aa9.76□□□□□ -0.85
RPGRIP1L-202ENST00000379925 ZNF777Q9ULD5 760 aaPredicted RBP9.75□□□□□ -0.85
RPGRIP1L-202ENST00000379925 ABCA10Q8WWZ4 1543 aa9.74□□□□□ -0.85
RPGRIP1L-202ENST00000379925 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.73□□□□□ -0.85
RPGRIP1L-202ENST00000379925 FGD1P98174 961 aa9.72□□□□□ -0.85
RPGRIP1L-202ENST00000379925 AQRO60306 1485 aaKnown RBP eCLIP9.72□□□□□ -0.85
RPGRIP1L-202ENST00000379925 PRDM2Q13029 1718 aa9.71□□□□□ -0.85
RPGRIP1L-202ENST00000379925 ACIN1Q9UKV3 1341 aaKnown RBP9.71□□□□□ -0.85
RPGRIP1L-202ENST00000379925 ZBTB7CA1YPR0 619 aa9.71□□□□□ -0.86
RPGRIP1L-202ENST00000379925 VSIG10Q8N0Z9 540 aa9.69□□□□□ -0.86
RPGRIP1L-202ENST00000379925 URB2Q14146 1524 aaKnown RBP9.69□□□□□ -0.86
RPGRIP1L-202ENST00000379925 SAMD1Q6SPF0 538 aaPredicted RBP9.69□□□□□ -0.86
RPGRIP1L-202ENST00000379925 FKBP8Q14318 412 aa9.69□□□□□ -0.86
RPGRIP1L-202ENST00000379925 ERICH6BQ5W0A0 696 aa9.68□□□□□ -0.86
RPGRIP1L-202ENST00000379925 CUL7Q14999 1698 aa9.68□□□□□ -0.86
RPGRIP1L-202ENST00000379925 NCLP19338 710 aaKnown RBP9.68□□□□□ -0.86
RPGRIP1L-202ENST00000379925 PRXQ9BXM0 1461 aa9.67□□□□□ -0.86
RPGRIP1L-202ENST00000379925 TSPY4P0CV99 314 aa9.67□□□□□ -0.86
RPGRIP1L-202ENST00000379925 TSPY10P0CW01 314 aa9.67□□□□□ -0.86
RPGRIP1L-202ENST00000379925 JPH4Q96JJ6 628 aa9.66□□□□□ -0.86
RPGRIP1L-202ENST00000379925 USP35Q9P2H5 1018 aa9.66□□□□□ -0.86
RPGRIP1L-202ENST00000379925 FHOD3Q2V2M9 1422 aa9.66□□□□□ -0.86
RPGRIP1L-202ENST00000379925 CCNB3Q8WWL7 1395 aa9.64□□□□□ -0.87
RPGRIP1L-202ENST00000379925 SNAPC4Q5SXM2 1469 aa9.64□□□□□ -0.87
RPGRIP1L-202ENST00000379925 CNKSR2Q8WXI2 1034 aa9.64□□□□□ -0.87
RPGRIP1L-202ENST00000379925 ARHGAP35Q9NRY4 1499 aa9.64□□□□□ -0.87
RPGRIP1L-202ENST00000379925 EFCAB5A4FU69 1503 aa9.64□□□□□ -0.87
RPGRIP1L-202ENST00000379925 CFDP1Q9UEE9 299 aaPredicted RBP9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms