RNA–Protein interactions for RNA: ENST00000378748.7

OPTN-203, Transcript of optineurin, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene OPTN, Length 3,521 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OPTN-203ENST00000378748 SALL2Q9Y467 1007 aaPredicted RBP11.97□□□□□ -0.49
OPTN-203ENST00000378748 HNRNPUQ00839 825 aaKnown RBP eCLIP11.96□□□□□ -0.49
OPTN-203ENST00000378748 CCNB3Q8WWL7 1395 aa11.96□□□□□ -0.49
OPTN-203ENST00000378748 CARMIL1Q5VZK9 1371 aa11.94□□□□□ -0.5
OPTN-203ENST00000378748 TONSLQ96HA7 1378 aa11.94□□□□□ -0.5
OPTN-203ENST00000378748 SUPT16HQ9Y5B9 1047 aaKnown RBP11.94□□□□□ -0.5
OPTN-203ENST00000378748 KIF21BO75037 1637 aa11.94□□□□□ -0.5
OPTN-203ENST00000378748 DHX57Q6P158 1386 aaKnown RBP11.94□□□□□ -0.5
OPTN-203ENST00000378748 MTUS2Q5JR59 1369 aa11.93□□□□□ -0.5
OPTN-203ENST00000378748 RAB3GAP2Q9H2M9 1393 aa11.93□□□□□ -0.5
OPTN-203ENST00000378748 TDRD9Q8NDG6 1382 aaKnown RBP11.93□□□□□ -0.5
OPTN-203ENST00000378748 ERICH6Q7L0X2 663 aa11.92□□□□□ -0.5
OPTN-203ENST00000378748 MYT1LQ9UL68 1186 aa11.91□□□□□ -0.5
OPTN-203ENST00000378748 FHOD3Q2V2M9 1422 aa11.89□□□□□ -0.51
OPTN-203ENST00000378748 SENP3Q9H4L4 574 aaPredicted RBP11.88□□□□□ -0.51
OPTN-203ENST00000378748 KDM2AQ9Y2K7 1162 aa11.88□□□□□ -0.51
OPTN-203ENST00000378748 TOP2BQ02880 1626 aa11.88□□□□□ -0.51
OPTN-203ENST00000378748 ARAP1Q96P48 1450 aa11.87□□□□□ -0.51
OPTN-203ENST00000378748 BIVM-ERCC5R4GMW8 1640 aa11.83□□□□□ -0.52
OPTN-203ENST00000378748 MYT1Q01538 1121 aa11.82□□□□□ -0.52
OPTN-203ENST00000378748 RAD54L2Q9Y4B4 1467 aa11.82□□□□□ -0.52
OPTN-203ENST00000378748 ERICH3Q5RHP9 1530 aa11.82□□□□□ -0.52
OPTN-203ENST00000378748 CFTRP13569 1480 aa11.81□□□□□ -0.52
OPTN-203ENST00000378748 IGF1RP08069 1367 aa11.8□□□□□ -0.52
OPTN-203ENST00000378748 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.8□□□□□ -0.521e-7■■■□□ 16.3
OPTN-203ENST00000378748 PHLDB1Q86UU1 1377 aa11.8□□□□□ -0.52
OPTN-203ENST00000378748 SLC4A1APQ9BWU0 796 aaKnown RBP11.78□□□□□ -0.52
OPTN-203ENST00000378748 MRS2Q9HD23 443 aa11.78□□□□□ -0.52
OPTN-203ENST00000378748 SETD5Q9C0A6 1442 aa11.78□□□□□ -0.52
OPTN-203ENST00000378748 CLSPNQ9HAW4 1339 aa11.77□□□□□ -0.53
OPTN-203ENST00000378748 RGL3Q3MIN7 710 aa11.76□□□□□ -0.53
OPTN-203ENST00000378748 NESP48681 1621 aa11.75□□□□□ -0.53
OPTN-203ENST00000378748 CADPSQ9ULU8 1353 aa11.75□□□□□ -0.53
OPTN-203ENST00000378748 PRXQ9BXM0 1461 aa11.74□□□□□ -0.53
OPTN-203ENST00000378748 PPP1R15AO75807 674 aaPredicted RBP11.74□□□□□ -0.53
OPTN-203ENST00000378748 ARHGAP35Q9NRY4 1499 aa11.74□□□□□ -0.53
OPTN-203ENST00000378748 CUX1P39880 1505 aa11.74□□□□□ -0.53
OPTN-203ENST00000378748 HSPA5P11021 654 aaKnown RBP11.73□□□□□ -0.53
OPTN-203ENST00000378748 TSHZ2Q9NRE2 1034 aa11.73□□□□□ -0.53
OPTN-203ENST00000378748 FGD5Q6ZNL6 1462 aa11.72□□□□□ -0.53
OPTN-203ENST00000378748 CHMP7Q8WUX9 453 aaPredicted RBP11.71□□□□□ -0.53
OPTN-203ENST00000378748 ZNF644Q9H582 1327 aaPredicted RBP11.71□□□□□ -0.54
OPTN-203ENST00000378748 EIF4G2P78344 907 aaKnown RBP eCLIP11.7□□□□□ -0.54
OPTN-203ENST00000378748 B4GALNT3Q6L9W6 998 aa11.7□□□□□ -0.54
OPTN-203ENST00000378748 NPM2Q86SE8 214 aaKnown RBP11.69□□□□□ -0.54
OPTN-203ENST00000378748 CDK11AQ9UQ88 783 aaPredicted RBP11.69□□□□□ -0.54
OPTN-203ENST00000378748 PRDM2Q13029 1718 aa11.69□□□□□ -0.54
OPTN-203ENST00000378748 L3MBTL2Q969R5 705 aa11.68□□□□□ -0.54
OPTN-203ENST00000378748 AEBP2Q6ZN18 517 aaPredicted RBP11.66□□□□□ -0.54
OPTN-203ENST00000378748 CCDC184Q52MB2 194 aa11.66□□□□□ -0.54
OPTN-203ENST00000378748 CFDP1Q9UEE9 299 aaPredicted RBP11.65□□□□□ -0.54
OPTN-203ENST00000378748 FANCD2Q9BXW9 1451 aa11.65□□□□□ -0.54
OPTN-203ENST00000378748 BCL11AQ9H165 835 aa11.64□□□□□ -0.55
OPTN-203ENST00000378748 FHAD1B1AJZ9 1412 aa11.64□□□□□ -0.55
OPTN-203ENST00000378748 NBR1Q14596 966 aa11.64□□□□□ -0.55
OPTN-203ENST00000378748 MPHOSPH9Q99550 1183 aa11.63□□□□□ -0.55
OPTN-203ENST00000378748 TMC1Q8TDI8 760 aa11.61□□□□□ -0.55
OPTN-203ENST00000378748 RBM19Q9Y4C8 960 aaKnown RBP11.61□□□□□ -0.55
OPTN-203ENST00000378748 WDR97A6NE52 1622 aa11.6□□□□□ -0.55
OPTN-203ENST00000378748 PDS5BQ9NTI5 1447 aa11.6□□□□□ -0.55
OPTN-203ENST00000378748 LRRC9Q6ZRR7 1453 aa11.59□□□□□ -0.55
OPTN-203ENST00000378748 CC2D2AQ9P2K1 1620 aa11.58□□□□□ -0.56
OPTN-203ENST00000378748 PKD2Q13563 968 aa11.57□□□□□ -0.56
OPTN-203ENST00000378748 AQRO60306 1485 aaKnown RBP eCLIP11.57□□□□□ -0.563e-7■■□□□ 11.5
OPTN-203ENST00000378748 CHGAP10645 457 aaKnown RBP11.57□□□□□ -0.56
OPTN-203ENST00000378748 DCAF11Q8TEB1 546 aa11.57□□□□□ -0.56
OPTN-203ENST00000378748 RRBP1Q9P2E9 1410 aaKnown RBP11.57□□□□□ -0.56
OPTN-203ENST00000378748 TSPY4P0CV99 314 aa11.56□□□□□ -0.56
OPTN-203ENST00000378748 TSPY10P0CW01 314 aa11.56□□□□□ -0.56
OPTN-203ENST00000378748 CARD11Q9BXL7 1154 aa11.56□□□□□ -0.56
OPTN-203ENST00000378748 CCDC136Q96JN2 1154 aa11.55□□□□□ -0.56
OPTN-203ENST00000378748 MAP3K1Q13233 1512 aa11.55□□□□□ -0.56
OPTN-203ENST00000378748 CC2D1BQ5T0F9 858 aaKnown RBP11.55□□□□□ -0.56
OPTN-203ENST00000378748 C11orf95C9JLR9 678 aaPredicted RBP11.54□□□□□ -0.56
OPTN-203ENST00000378748 HNRNPMP52272 730 aaKnown RBP eCLIP11.54□□□□□ -0.56
OPTN-203ENST00000378748 PLEKHD1A6NEE1 506 aa11.53□□□□□ -0.56
OPTN-203ENST00000378748 CCDC18Q5T9S5 1454 aa11.53□□□□□ -0.56
OPTN-203ENST00000378748 DNMBPQ6XZF7 1577 aa11.53□□□□□ -0.56
OPTN-203ENST00000378748 WASHC2AQ641Q2 1341 aa11.53□□□□□ -0.56
OPTN-203ENST00000378748 NBPF8Q3BBV2 869 aa11.51□□□□□ -0.57
OPTN-203ENST00000378748 ANP32EQ9BTT0 268 aa11.51□□□□□ -0.57
OPTN-203ENST00000378748 FGD6Q6ZV73 1430 aa11.51□□□□□ -0.57
OPTN-203ENST00000378748 FMN1Q68DA7 1419 aa11.5□□□□□ -0.57
OPTN-203ENST00000378748 ABCA10Q8WWZ4 1543 aa11.49□□□□□ -0.57
OPTN-203ENST00000378748 POLA1P09884 1462 aaPredicted RBP11.49□□□□□ -0.57
OPTN-203ENST00000378748 LAMC3Q9Y6N6 1575 aa11.49□□□□□ -0.57
OPTN-203ENST00000378748 CCER2I3L3R5 266 aa11.47□□□□□ -0.57
OPTN-203ENST00000378748 TNNT2P45379 298 aaPredicted RBP11.47□□□□□ -0.57
OPTN-203ENST00000378748 PTPRKQ15262 1439 aa11.47□□□□□ -0.57
OPTN-203ENST00000378748 TIMELESSQ9UNS1 1208 aa11.46□□□□□ -0.57
OPTN-203ENST00000378748 GAPVD1Q14C86 1478 aa11.46□□□□□ -0.57
OPTN-203ENST00000378748 EFCAB5A4FU69 1503 aa11.46□□□□□ -0.57
OPTN-203ENST00000378748 TIAM1Q13009 1591 aa11.46□□□□□ -0.57
OPTN-203ENST00000378748 TOPBP1Q92547 1522 aa11.46□□□□□ -0.58
OPTN-203ENST00000378748 PRKRIP1Q9H875 184 aaPredicted RBP11.46□□□□□ -0.58
OPTN-203ENST00000378748 CUL7Q14999 1698 aa11.45□□□□□ -0.58
OPTN-203ENST00000378748 ST20-MTHFSA0A0A6YYL1 179 aa11.45□□□□□ -0.58
OPTN-203ENST00000378748 NCOA2Q15596 1464 aa11.45□□□□□ -0.58
OPTN-203ENST00000378748 PCF11O94913 1555 aaKnown RBP11.45□□□□□ -0.58
OPTN-203ENST00000378748 PLPPR3Q6T4P5 718 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms